RNA–Protein interactions for RNA: ENST00000566426.1

PDXDC1-213, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 283 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-213ENST00000566426 COG3Q96JB2 828 aa28.58■■■□□ 2.17
PDXDC1-213ENST00000566426 COL24A1Q17RW2 1714 aa28.57■■■□□ 2.16
PDXDC1-213ENST00000566426 GRIN3BO60391 1043 aa28.57■■■□□ 2.16
PDXDC1-213ENST00000566426 AMPHP49418 695 aa28.57■■■□□ 2.16
PDXDC1-213ENST00000566426 CCNL1Q9UK58 526 aaPredicted RBP28.56■■■□□ 2.16
PDXDC1-213ENST00000566426 HOXC9P31274 260 aa28.55■■■□□ 2.16
PDXDC1-213ENST00000566426 NLGN2Q8NFZ4 835 aa28.55■■■□□ 2.16
PDXDC1-213ENST00000566426 GOLGB1Q14789 3259 aaKnown RBP28.55■■■□□ 2.16
PDXDC1-213ENST00000566426 MAP3K19Q56UN5 1328 aa28.54■■■□□ 2.16
PDXDC1-213ENST00000566426 MSH5O43196 834 aa28.54■■■□□ 2.16
PDXDC1-213ENST00000566426 HMGB2P26583 209 aaKnown RBP28.54■■■□□ 2.16
PDXDC1-213ENST00000566426 LY75O60449 1722 aa28.52■■■□□ 2.16
PDXDC1-213ENST00000566426 NSD2O96028 1365 aa28.51■■■□□ 2.16
PDXDC1-213ENST00000566426 USP47Q96K76 1375 aa28.51■■■□□ 2.16
PDXDC1-213ENST00000566426 SLC24A1O60721 1099 aa28.51■■■□□ 2.15
PDXDC1-213ENST00000566426 TUBGCP6Q96RT7 1819 aa28.5■■■□□ 2.15
PDXDC1-213ENST00000566426 DOT1LQ8TEK3 1739 aa28.5■■■□□ 2.15
PDXDC1-213ENST00000566426 CGNL1Q0VF96 1302 aa28.49■■■□□ 2.15
PDXDC1-213ENST00000566426 COL23A1Q86Y22 540 aaPredicted RBP28.48■■■□□ 2.15
PDXDC1-213ENST00000566426 YBX3P16989 372 aaKnown RBP eCLIP28.47■■■□□ 2.15
PDXDC1-213ENST00000566426 MEGF6O75095 1541 aa28.46■■■□□ 2.15
PDXDC1-213ENST00000566426 FBLN1P23142 703 aa28.45■■■□□ 2.14
PDXDC1-213ENST00000566426 FLAD1Q8NFF5 587 aa28.45■■■□□ 2.14
PDXDC1-213ENST00000566426 RAPGEF4Q8WZA2 1011 aa28.45■■■□□ 2.14
PDXDC1-213ENST00000566426 RTL1A6NKG5 1358 aa28.45■■■□□ 2.14
PDXDC1-213ENST00000566426 TONSLQ96HA7 1378 aa28.43■■■□□ 2.14
PDXDC1-213ENST00000566426 NBPF6Q5VWK0 638 aa28.43■■■□□ 2.14
PDXDC1-213ENST00000566426 NBPF4Q96M43 638 aa28.43■■■□□ 2.14
PDXDC1-213ENST00000566426 SHANK3Q9BYB0 1731 aa28.43■■■□□ 2.14
PDXDC1-213ENST00000566426 CD2APQ9Y5K6 639 aa28.42■■■□□ 2.14
PDXDC1-213ENST00000566426 SMG6Q86US8 1419 aaKnown RBP28.42■■■□□ 2.14
PDXDC1-213ENST00000566426 TATP17735 454 aaPredicted RBP28.41■■■□□ 2.14
PDXDC1-213ENST00000566426 MSL1Q68DK7 614 aa28.41■■■□□ 2.14
PDXDC1-213ENST00000566426 TESK2Q96S53 571 aa28.41■■■□□ 2.14
PDXDC1-213ENST00000566426 RGPD2P0DJD1 1756 aa28.41■■■□□ 2.14
PDXDC1-213ENST00000566426 RRS1Q15050 365 aaKnown RBP28.4■■■□□ 2.14
PDXDC1-213ENST00000566426 ST20-MTHFSA0A0A6YYL1 179 aa28.39■■■□□ 2.14
PDXDC1-213ENST00000566426 USHBP1Q8N6Y0 703 aa28.38■■■□□ 2.13
PDXDC1-213ENST00000566426 IFFO2Q5TF58 517 aa28.37■■■□□ 2.13
PDXDC1-213ENST00000566426 PCDH11XQ9BZA7 1347 aa28.37■■■□□ 2.13
PDXDC1-213ENST00000566426 PCDH11YQ9BZA8 1340 aa28.37■■■□□ 2.13
PDXDC1-213ENST00000566426 CEP350Q5VT06 3117 aa28.36■■■□□ 2.13
PDXDC1-213ENST00000566426 FYB1O15117 783 aa28.35■■■□□ 2.13
PDXDC1-213ENST00000566426 GGNBP2Q9H3C7 697 aa28.34■■■□□ 2.13
PDXDC1-213ENST00000566426 GPBP1L1Q9HC44 474 aaPredicted RBP28.34■■■□□ 2.13
PDXDC1-213ENST00000566426 PALLDQ8WX93 1383 aa28.34■■■□□ 2.13
PDXDC1-213ENST00000566426 ATP10DQ9P241 1426 aa28.34■■■□□ 2.13
PDXDC1-213ENST00000566426 MPRIPQ6WCQ1 1025 aa28.33■■■□□ 2.13
PDXDC1-213ENST00000566426 SMARCC1Q92922 1105 aaPredicted RBP28.33■■■□□ 2.13
PDXDC1-213ENST00000566426 C5P01031 1676 aa28.32■■■□□ 2.12
PDXDC1-213ENST00000566426 AK7Q96M32 723 aa28.31■■■□□ 2.12
PDXDC1-213ENST00000566426 INSRP06213 1382 aa28.31■■■□□ 2.12
PDXDC1-213ENST00000566426 HSP90AB2PQ58FF8 381 aa28.29■■■□□ 2.12
PDXDC1-213ENST00000566426 KIF24Q5T7B8 1368 aa28.28■■■□□ 2.12
PDXDC1-213ENST00000566426 FLT4P35916 1363 aa28.27■■■□□ 2.12
PDXDC1-213ENST00000566426 TMF1P82094 1093 aa28.27■■■□□ 2.12
PDXDC1-213ENST00000566426 NSD3Q9BZ95 1437 aa28.26■■■□□ 2.12
PDXDC1-213ENST00000566426 CYP27B1O15528 508 aa28.26■■■□□ 2.11
PDXDC1-213ENST00000566426 TAF1LQ8IZX4 1826 aa28.25■■■□□ 2.11
PDXDC1-213ENST00000566426 C4BP0C0L5 1744 aa28.23■■■□□ 2.11
PDXDC1-213ENST00000566426 ADCY9O60503 1353 aa28.23■■■□□ 2.11
PDXDC1-213ENST00000566426 IGSF1Q8N6C5 1336 aa28.22■■■□□ 2.11
PDXDC1-213ENST00000566426 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.22■■■□□ 2.11
PDXDC1-213ENST00000566426 PHF14O94880 888 aa28.22■■■□□ 2.11
PDXDC1-213ENST00000566426 HSPA6P17066 643 aa28.21■■■□□ 2.11
PDXDC1-213ENST00000566426 SSFA2P28290 1259 aa28.21■■■□□ 2.11
PDXDC1-213ENST00000566426 CDCA8Q53HL2 280 aa28.21■■■□□ 2.11
PDXDC1-213ENST00000566426 ZNF526Q8TF50 670 aaPredicted RBP28.21■■■□□ 2.11
PDXDC1-213ENST00000566426 PIGBQ92521 554 aa28.2■■■□□ 2.1
PDXDC1-213ENST00000566426 SPG7Q9UQ90 795 aa28.2■■■□□ 2.1
PDXDC1-213ENST00000566426 NKX1-1Q15270 411 aaPredicted RBP28.19■■■□□ 2.1
PDXDC1-213ENST00000566426 LOC102724428A0A0B4J2F2 783 aa28.17■■■□□ 2.1
PDXDC1-213ENST00000566426 SIK1P57059 783 aa28.17■■■□□ 2.1
PDXDC1-213ENST00000566426 AMIGO3Q86WK7 504 aa28.17■■■□□ 2.1
PDXDC1-213ENST00000566426 ITGB4P16144 1822 aa28.17■■■□□ 2.1
PDXDC1-213ENST00000566426 UBR3Q6ZT12 1888 aa28.15■■■□□ 2.1
PDXDC1-213ENST00000566426 TMOD3Q9NYL9 352 aa28.14■■■□□ 2.1
PDXDC1-213ENST00000566426 WWC3Q9ULE0 1092 aa28.14■■■□□ 2.1
PDXDC1-213ENST00000566426 EMILIN1Q9Y6C2 1016 aa28.14■■■□□ 2.1
PDXDC1-213ENST00000566426 TOGARAM1Q9Y4F4 1720 aa28.14■■■□□ 2.1
PDXDC1-213ENST00000566426 KIF20BQ96Q89 1820 aa28.13■■■□□ 2.09
PDXDC1-213ENST00000566426 SMIM5Q71RC9 77 aa28.13■■■□□ 2.09
PDXDC1-213ENST00000566426 LINC00116Q8NCU8 138 aa28.13■■■□□ 2.09
PDXDC1-213ENST00000566426 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.13■■■□□ 2.091e-12■■■□□ 15.1
PDXDC1-213ENST00000566426 PKD1L3Q7Z443 1732 aa28.12■■■□□ 2.09
PDXDC1-213ENST00000566426 PPM1GO15355 546 aaPredicted RBP28.12■■■□□ 2.09
PDXDC1-213ENST00000566426 GNPATO15228 680 aa28.1■■■□□ 2.09
PDXDC1-213ENST00000566426 ATP6V1AP38606 617 aa28.1■■■□□ 2.09
PDXDC1-213ENST00000566426 NCAPD2Q15021 1401 aa28.09■■■□□ 2.09
PDXDC1-213ENST00000566426 IFNL2Q8IZJ0 200 aa28.08■■■□□ 2.09
PDXDC1-213ENST00000566426 ASAP1Q9ULH1 1129 aa28.08■■■□□ 2.09
PDXDC1-213ENST00000566426 MAP2P11137 1827 aaKnown RBP28.07■■■□□ 2.08
PDXDC1-213ENST00000566426 CARD14Q9BXL6 1004 aa28.07■■■□□ 2.08
PDXDC1-213ENST00000566426 WASHC2AQ641Q2 1341 aa28.07■■■□□ 2.08
PDXDC1-213ENST00000566426 KIF3CO14782 793 aa28.06■■■□□ 2.08
PDXDC1-213ENST00000566426 MMP10P09238 476 aa28.06■■■□□ 2.08
PDXDC1-213ENST00000566426 ITPK1Q13572 414 aa28.06■■■□□ 2.08
PDXDC1-213ENST00000566426 EYA1Q99502 592 aa28.05■■■□□ 2.08
PDXDC1-213ENST00000566426 PHKG2P15735 406 aa28.04■■■□□ 2.08
PDXDC1-213ENST00000566426 TGFB2P61812 414 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms