RNA–Protein interactions for RNA: ENST00000566286.5

TCF4-232, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-232ENST00000566286 RIPK4P57078 832 aa13.63□□□□□ -0.23
TCF4-232ENST00000566286 LNPKQ9C0E8 428 aa13.63□□□□□ -0.23
TCF4-232ENST00000566286 PLEKHG3A1L390 1219 aa13.62□□□□□ -0.23
TCF4-232ENST00000566286 HSP90AA1P07900 732 aaKnown RBP13.62□□□□□ -0.23
TCF4-232ENST00000566286 IRF5Q13568 498 aa13.62□□□□□ -0.23
TCF4-232ENST00000566286 CABP2Q9NPB3 220 aa13.62□□□□□ -0.23
TCF4-232ENST00000566286 ATAD2Q6PL18 1390 aa13.62□□□□□ -0.23
TCF4-232ENST00000566286 A2ML1A8K2U0 1454 aa13.61□□□□□ -0.23
TCF4-232ENST00000566286 PPIP5K1Q6PFW1 1433 aa13.61□□□□□ -0.23
TCF4-232ENST00000566286 NUBP1P53384 320 aa13.61□□□□□ -0.23
TCF4-232ENST00000566286 CDC42BPGQ6DT37 1551 aa13.61□□□□□ -0.23
TCF4-232ENST00000566286 TERF2IPQ9NYB0 399 aa13.61□□□□□ -0.23
TCF4-232ENST00000566286 GOLGA6L22H0YM25 854 aa13.6□□□□□ -0.23
TCF4-232ENST00000566286 K7ELQ4 463 aaPredicted RBP13.6□□□□□ -0.23
TCF4-232ENST00000566286 RRP9O43818 475 aaKnown RBP13.6□□□□□ -0.23
TCF4-232ENST00000566286 DIAPH1O60610 1272 aaKnown RBP13.6□□□□□ -0.23
TCF4-232ENST00000566286 PNPLA6Q8IY17 1366 aa13.6□□□□□ -0.23
TCF4-232ENST00000566286 ARHGAP45Q92619 1136 aa13.6□□□□□ -0.23
TCF4-232ENST00000566286 GGNBP2Q9H3C7 697 aa13.6□□□□□ -0.23
TCF4-232ENST00000566286 PIK3R4Q99570 1358 aa13.59□□□□□ -0.23
TCF4-232ENST00000566286 ALKQ9UM73 1620 aa13.59□□□□□ -0.23
TCF4-232ENST00000566286 KIF2CQ99661 725 aa13.59□□□□□ -0.23
TCF4-232ENST00000566286 IBTKQ9P2D0 1353 aaPredicted RBP13.59□□□□□ -0.23
TCF4-232ENST00000566286 FCHSD2O94868 740 aa13.58□□□□□ -0.23
TCF4-232ENST00000566286 SRPK2P78362 688 aaKnown RBP13.58□□□□□ -0.23
TCF4-232ENST00000566286 ANKRD45Q5TZF3 282 aa13.58□□□□□ -0.23
TCF4-232ENST00000566286 CLEC17AQ6ZS10 378 aa13.58□□□□□ -0.23
TCF4-232ENST00000566286 PTCH1Q13635 1447 aa13.58□□□□□ -0.24
TCF4-232ENST00000566286 PTPRMP28827 1452 aa13.58□□□□□ -0.24
TCF4-232ENST00000566286 FYB1O15117 783 aa13.58□□□□□ -0.24
TCF4-232ENST00000566286 CALD1Q05682 793 aaKnown RBP13.58□□□□□ -0.24
TCF4-232ENST00000566286 FBXW7Q969H0 707 aa13.58□□□□□ -0.24
TCF4-232ENST00000566286 KIF20BQ96Q89 1820 aa13.58□□□□□ -0.24
TCF4-232ENST00000566286 ZBTB7BO15156 539 aaPredicted RBP13.57□□□□□ -0.24
TCF4-232ENST00000566286 CCDC173Q0VFZ6 552 aa13.57□□□□□ -0.24
TCF4-232ENST00000566286 HSP90AA2PQ14568 343 aaPredicted RBP13.57□□□□□ -0.24
TCF4-232ENST00000566286 RBM26Q5T8P6 1007 aaKnown RBP13.57□□□□□ -0.24
TCF4-232ENST00000566286 LRRC7Q96NW7 1537 aa13.57□□□□□ -0.24
TCF4-232ENST00000566286 SETD1AO15047 1707 aaKnown RBP13.57□□□□□ -0.24
TCF4-232ENST00000566286 TBC1D9Q6ZT07 1266 aa13.57□□□□□ -0.24
TCF4-232ENST00000566286 GAS2L3Q86XJ1 694 aa13.57□□□□□ -0.24
TCF4-232ENST00000566286 YTHDC2Q9H6S0 1430 aaKnown RBP13.57□□□□□ -0.24
TCF4-232ENST00000566286 RIMS2Q9UQ26 1411 aa13.57□□□□□ -0.24
TCF4-232ENST00000566286 ANP32BQ92688 251 aaKnown RBP13.56□□□□□ -0.24
TCF4-232ENST00000566286 ERBB4Q15303 1308 aa13.56□□□□□ -0.24
TCF4-232ENST00000566286 FAM135BQ49AJ0 1406 aa13.56□□□□□ -0.24
TCF4-232ENST00000566286 CDC45O75419 566 aa13.55□□□□□ -0.24
TCF4-232ENST00000566286 CCDC97Q96F63 343 aaPredicted RBP13.55□□□□□ -0.24
TCF4-232ENST00000566286 CD163L1Q9NR16 1453 aa13.55□□□□□ -0.24
TCF4-232ENST00000566286 KLHL40Q2TBA0 621 aa13.55□□□□□ -0.24
TCF4-232ENST00000566286 HDGFL2Q7Z4V5 671 aaPredicted RBP13.55□□□□□ -0.24
TCF4-232ENST00000566286 GPIHBP1Q8IV16 184 aa13.55□□□□□ -0.24
TCF4-232ENST00000566286 ESF1Q9H501 851 aaKnown RBP13.55□□□□□ -0.24
TCF4-232ENST00000566286 TPM2P07951 284 aa13.54□□□□□ -0.24
TCF4-232ENST00000566286 MRPL50Q8N5N7 158 aaKnown RBP13.54□□□□□ -0.24
TCF4-232ENST00000566286 PPP1R9BQ96SB3 815 aa13.54□□□□□ -0.24
TCF4-232ENST00000566286 STK26Q9P289 416 aa13.54□□□□□ -0.24
TCF4-232ENST00000566286 SAFB2Q14151 953 aaKnown RBP eCLIP13.54□□□□□ -0.24
TCF4-232ENST00000566286 NRXN3Q9Y4C0 1643 aa13.53□□□□□ -0.24
TCF4-232ENST00000566286 ABCC4O15439 1325 aa13.53□□□□□ -0.24
TCF4-232ENST00000566286 CD2BP2O95400 341 aaKnown RBP13.53□□□□□ -0.24
TCF4-232ENST00000566286 SERPINA10Q9UK55 444 aa13.53□□□□□ -0.24
TCF4-232ENST00000566286 VAMP4O75379 141 aa13.52□□□□□ -0.24
TCF4-232ENST00000566286 NASPP49321 788 aaPredicted RBP13.52□□□□□ -0.24
TCF4-232ENST00000566286 GNAI1P63096 354 aa13.52□□□□□ -0.24
TCF4-232ENST00000566286 RABEP1Q15276 862 aa13.52□□□□□ -0.24
TCF4-232ENST00000566286 KIF24Q5T7B8 1368 aa13.52□□□□□ -0.25
TCF4-232ENST00000566286 TNRQ92752 1358 aa13.52□□□□□ -0.25
TCF4-232ENST00000566286 SSFA2P28290 1259 aa13.52□□□□□ -0.25
TCF4-232ENST00000566286 PRKAR2BP31323 418 aa13.52□□□□□ -0.25
TCF4-232ENST00000566286 NUCB2P80303 420 aa13.52□□□□□ -0.25
TCF4-232ENST00000566286 NFE2L2Q16236 605 aa13.52□□□□□ -0.25
TCF4-232ENST00000566286 GAS2L2Q8NHY3 880 aa13.52□□□□□ -0.25
TCF4-232ENST00000566286 IFT57Q9NWB7 429 aa13.52□□□□□ -0.25
TCF4-232ENST00000566286 DDX49Q9Y6V7 483 aaKnown RBP13.52□□□□□ -0.25
TCF4-232ENST00000566286 BAG4O95429 457 aaKnown RBP13.51□□□□□ -0.25
TCF4-232ENST00000566286 SSUH2Q9Y2M2 353 aa13.51□□□□□ -0.25
TCF4-232ENST00000566286 DLC1Q96QB1 1528 aa13.51□□□□□ -0.25
TCF4-232ENST00000566286 UBR1Q8IWV7 1749 aa13.51□□□□□ -0.25
TCF4-232ENST00000566286 PRAM1Q96QH2 718 aa13.51□□□□□ -0.25
TCF4-232ENST00000566286 API5Q9BZZ5 524 aaKnown RBP13.51□□□□□ -0.25
TCF4-232ENST00000566286 ZSCAN30Q86W11 494 aa13.5□□□□□ -0.25
TCF4-232ENST00000566286 SIRT2Q8IXJ6 389 aa13.49□□□□□ -0.25
TCF4-232ENST00000566286 RBM42Q9BTD8 480 aaKnown RBP13.49□□□□□ -0.25
TCF4-232ENST00000566286 MINK1Q8N4C8 1332 aaPredicted RBP13.49□□□□□ -0.25
TCF4-232ENST00000566286 ZNF445P59923 1031 aa13.49□□□□□ -0.25
TCF4-232ENST00000566286 LMOD3Q0VAK6 560 aa13.48□□□□□ -0.25
TCF4-232ENST00000566286 HS1BP3Q53T59 392 aa13.48□□□□□ -0.25
TCF4-232ENST00000566286 ZNF853P0CG23 659 aa13.48□□□□□ -0.25
TCF4-232ENST00000566286 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.48□□□□□ -0.25
TCF4-232ENST00000566286 CWC22Q9HCG8 908 aaKnown RBP13.48□□□□□ -0.25
TCF4-232ENST00000566286 ZBTB12Q9Y330 459 aaPredicted RBP13.48□□□□□ -0.25
TCF4-232ENST00000566286 MAP2P11137 1827 aaKnown RBP13.47□□□□□ -0.25
TCF4-232ENST00000566286 MSNP26038 577 aaKnown RBP13.47□□□□□ -0.25
TCF4-232ENST00000566286 TWISTNBQ3B726 338 aaPredicted RBP13.47□□□□□ -0.25
TCF4-232ENST00000566286 PROSER2Q86WR7 435 aaPredicted RBP13.47□□□□□ -0.25
TCF4-232ENST00000566286 ATP7BP35670 1465 aa13.47□□□□□ -0.25
TCF4-232ENST00000566286 GSPT1P15170 499 aaKnown RBP13.46□□□□□ -0.25
TCF4-232ENST00000566286 TTC22Q5TAA0 569 aa13.46□□□□□ -0.25
TCF4-232ENST00000566286 AK9Q5TCS8 1911 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms