RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 NFAT5O94916 1531 aa14.81□□□□□ -0.04
SF3B3-205ENST00000564899 ATF5Q9Y2D1 282 aaPredicted RBP14.8□□□□□ -0.04
SF3B3-205ENST00000564899 INSRP06213 1382 aa14.8□□□□□ -0.04
SF3B3-205ENST00000564899 COL18A1P39060 1754 aa14.8□□□□□ -0.04
SF3B3-205ENST00000564899 MARCH10Q8NA82 808 aaPredicted RBP14.79□□□□□ -0.04
SF3B3-205ENST00000564899 THRAP3Q9Y2W1 955 aaKnown RBP14.79□□□□□ -0.04
SF3B3-205ENST00000564899 FLT4P35916 1363 aa14.78□□□□□ -0.04
SF3B3-205ENST00000564899 KIF24Q5T7B8 1368 aa14.78□□□□□ -0.04
SF3B3-205ENST00000564899 PLSCR1O15162 318 aa14.78□□□□□ -0.04
SF3B3-205ENST00000564899 DIAPH1O60610 1272 aaKnown RBP14.78□□□□□ -0.04
SF3B3-205ENST00000564899 AMPHP49418 695 aa14.78□□□□□ -0.04
SF3B3-205ENST00000564899 AXIN2Q9Y2T1 843 aa14.78□□□□□ -0.04
SF3B3-205ENST00000564899 RTL1A6NKG5 1358 aa14.77□□□□□ -0.04
SF3B3-205ENST00000564899 NUDCQ9Y266 331 aa14.77□□□□□ -0.05
SF3B3-205ENST00000564899 MAP2P11137 1827 aaKnown RBP14.77□□□□□ -0.05
SF3B3-205ENST00000564899 FHDC1Q9C0D6 1143 aaPredicted RBP14.76□□□□□ -0.05
SF3B3-205ENST00000564899 BCL11BQ9C0K0 894 aaPredicted RBP14.76□□□□□ -0.05
SF3B3-205ENST00000564899 RGPD5Q99666 1765 aa14.75□□□□□ -0.05
SF3B3-205ENST00000564899 HOXC9P31274 260 aa14.75□□□□□ -0.05
SF3B3-205ENST00000564899 DDB1Q16531 1140 aa14.75□□□□□ -0.05
SF3B3-205ENST00000564899 ARHGEF25Q86VW2 580 aa14.75□□□□□ -0.05
SF3B3-205ENST00000564899 SGIP1Q9BQI5 828 aa14.75□□□□□ -0.05
SF3B3-205ENST00000564899 ADAMTS8Q9UP79 889 aa14.75□□□□□ -0.05
SF3B3-205ENST00000564899 U2SURPO15042 1029 aaKnown RBP14.74□□□□□ -0.05
SF3B3-205ENST00000564899 HSP90AB2PQ58FF8 381 aa14.74□□□□□ -0.05
SF3B3-205ENST00000564899 SYT17Q9BSW7 474 aa14.74□□□□□ -0.05
SF3B3-205ENST00000564899 SENP3-EIF4A1A0A087X0R7 540 aa14.73□□□□□ -0.05
SF3B3-205ENST00000564899 DCAF8L1A6NGE4 600 aa14.73□□□□□ -0.05
SF3B3-205ENST00000564899 U2AF1L5P0DN76 240 aaPredicted RBP14.73□□□□□ -0.05
SF3B3-205ENST00000564899 IL13P35225 146 aa14.73□□□□□ -0.05
SF3B3-205ENST00000564899 U2AF1Q01081 240 aaKnown RBP eCLIP14.73□□□□□ -0.05
SF3B3-205ENST00000564899 EIF4A2Q14240 407 aaKnown RBP14.73□□□□□ -0.05
SF3B3-205ENST00000564899 TXNRD1Q16881 649 aa14.73□□□□□ -0.05
SF3B3-205ENST00000564899 TOM1L2Q6ZVM7 507 aa14.73□□□□□ -0.05
SF3B3-205ENST00000564899 IP6K1Q92551 441 aa14.73□□□□□ -0.05
SF3B3-205ENST00000564899 HNRNPUQ00839 825 aaKnown RBP eCLIP14.72□□□□□ -0.05
SF3B3-205ENST00000564899 PAPPAQ13219 1627 aa14.71□□□□□ -0.05
SF3B3-205ENST00000564899 LTN1O94822 1766 aa14.71□□□□□ -0.05
SF3B3-205ENST00000564899 CHD4Q14839 1912 aa14.7□□□□□ -0.06
SF3B3-205ENST00000564899 WDR17Q8IZU2 1322 aa14.7□□□□□ -0.06
SF3B3-205ENST00000564899 BCL9O00512 1426 aa14.7□□□□□ -0.06
SF3B3-205ENST00000564899 SLC15A2Q16348 729 aa14.7□□□□□ -0.06
SF3B3-205ENST00000564899 C1QTNF8P60827 252 aa14.69□□□□□ -0.06
SF3B3-205ENST00000564899 CCDC146Q8IYE0 955 aa14.69□□□□□ -0.06
SF3B3-205ENST00000564899 LTV1Q96GA3 475 aaPredicted RBP14.69□□□□□ -0.06
SF3B3-205ENST00000564899 ABCC6O95255 1503 aa14.69□□□□□ -0.06
SF3B3-205ENST00000564899 STK32BQ9NY57 414 aa14.68□□□□□ -0.06
SF3B3-205ENST00000564899 NHSQ6T4R5 1651 aa14.68□□□□□ -0.06
SF3B3-205ENST00000564899 ZNF827Q17R98 1081 aa14.67□□□□□ -0.06
SF3B3-205ENST00000564899 ACSBG1Q96GR2 724 aa14.67□□□□□ -0.06
SF3B3-205ENST00000564899 MTFR1LQ9H019 292 aa14.67□□□□□ -0.06
SF3B3-205ENST00000564899 HMOX1P09601 288 aa14.66□□□□□ -0.06
SF3B3-205ENST00000564899 ANKRD24Q8TF21 1146 aa14.66□□□□□ -0.06
SF3B3-205ENST00000564899 RUNDC1Q96C34 613 aa14.66□□□□□ -0.06
SF3B3-205ENST00000564899 PNNQ9H307 717 aaKnown RBP14.66□□□□□ -0.06
SF3B3-205ENST00000564899 TNS2Q63HR2 1409 aa14.66□□□□□ -0.06
SF3B3-205ENST00000564899 IGSF1Q8N6C5 1336 aa14.66□□□□□ -0.06
SF3B3-205ENST00000564899 FCHSD2O94868 740 aa14.65□□□□□ -0.06
SF3B3-205ENST00000564899 EYA1Q99502 592 aa14.65□□□□□ -0.06
SF3B3-205ENST00000564899 RSPH6AQ9H0K4 717 aa14.65□□□□□ -0.06
SF3B3-205ENST00000564899 MAPK8IP3Q9UPT6 1336 aa14.65□□□□□ -0.06
SF3B3-205ENST00000564899 PRKAR2BP31323 418 aa14.64□□□□□ -0.07
SF3B3-205ENST00000564899 SULT6B1Q6IMI4 303 aa14.64□□□□□ -0.07
SF3B3-205ENST00000564899 AEBP1Q8IUX7 1158 aa14.64□□□□□ -0.07
SF3B3-205ENST00000564899 ARXQ96QS3 562 aa14.64□□□□□ -0.07
SF3B3-205ENST00000564899 CARD10Q9BWT7 1032 aa14.64□□□□□ -0.07
SF3B3-205ENST00000564899 LRRC4BQ9NT99 713 aa14.64□□□□□ -0.07
SF3B3-205ENST00000564899 BTAF1O14981 1849 aa14.64□□□□□ -0.07
SF3B3-205ENST00000564899 ERBB3P21860 1342 aa14.64□□□□□ -0.07
SF3B3-205ENST00000564899 ZBED9Q6R2W3 1325 aa14.64□□□□□ -0.07
SF3B3-205ENST00000564899 APAF1O14727 1248 aa14.63□□□□□ -0.07
SF3B3-205ENST00000564899 PLEKHF1Q96S99 279 aa14.63□□□□□ -0.07
SF3B3-205ENST00000564899 SHANK3Q9BYB0 1731 aa14.63□□□□□ -0.07
SF3B3-205ENST00000564899 NEFMP07197 916 aa14.62□□□□□ -0.07
SF3B3-205ENST00000564899 CSB-PGBD3P0DP91 1061 aa14.62□□□□□ -0.07
SF3B3-205ENST00000564899 TUBGCP6Q96RT7 1819 aa14.62□□□□□ -0.07
SF3B3-205ENST00000564899 KDRP35968 1356 aa14.61□□□□□ -0.07
SF3B3-205ENST00000564899 NBPF6Q5VWK0 638 aa14.61□□□□□ -0.07
SF3B3-205ENST00000564899 USHBP1Q8N6Y0 703 aa14.61□□□□□ -0.07
SF3B3-205ENST00000564899 NBPF4Q96M43 638 aa14.61□□□□□ -0.07
SF3B3-205ENST00000564899 SALL2Q9Y467 1007 aaPredicted RBP14.61□□□□□ -0.07
SF3B3-205ENST00000564899 MAP3K5Q99683 1374 aa14.6□□□□□ -0.07
SF3B3-205ENST00000564899 EXOC5O00471 708 aa14.6□□□□□ -0.07
SF3B3-205ENST00000564899 KCNQ4P56696 695 aa14.6□□□□□ -0.07
SF3B3-205ENST00000564899 NLGN2Q8NFZ4 835 aa14.6□□□□□ -0.07
SF3B3-205ENST00000564899 CDCA7Q9BWT1 371 aaPredicted RBP14.6□□□□□ -0.07
SF3B3-205ENST00000564899 CENPBP07199 599 aaPredicted RBP14.59□□□□□ -0.07
SF3B3-205ENST00000564899 NLRP2Q9NX02 1062 aa14.59□□□□□ -0.07
SF3B3-205ENST00000564899 NCAPD2Q15021 1401 aa14.58□□□□□ -0.07
SF3B3-205ENST00000564899 IFFO2Q5TF58 517 aa14.58□□□□□ -0.08
SF3B3-205ENST00000564899 KLHL34Q8N239 644 aa14.58□□□□□ -0.08
SF3B3-205ENST00000564899 NGEFQ8N5V2 710 aa14.58□□□□□ -0.08
SF3B3-205ENST00000564899 RRP7AQ9Y3A4 280 aaKnown RBP14.58□□□□□ -0.08
SF3B3-205ENST00000564899 COL24A1Q17RW2 1714 aa14.58□□□□□ -0.08
SF3B3-205ENST00000564899 NEUROD2Q15784 382 aa14.57□□□□□ -0.08
SF3B3-205ENST00000564899 GPR162Q16538 588 aa14.57□□□□□ -0.08
SF3B3-205ENST00000564899 AKT1S1Q96B36 256 aa14.57□□□□□ -0.08
SF3B3-205ENST00000564899 PHACTR3Q96KR7 559 aa14.57□□□□□ -0.08
SF3B3-205ENST00000564899 KAT6BQ8WYB5 2073 aa14.56□□□□□ -0.08
SF3B3-205ENST00000564899 FAM208AQ9UK61 1670 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms