RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 MCM10Q7L590 875 aa19.06■□□□□ 0.64
HERC2-207ENST00000564734 HSCBQ8IWL3 235 aa19.06■□□□□ 0.64
HERC2-207ENST00000564734 ARHGEF10O15013 1369 aa19.06■□□□□ 0.64
HERC2-207ENST00000564734 AEBP2Q6ZN18 517 aaPredicted RBP19.05■□□□□ 0.64
HERC2-207ENST00000564734 ARHGAP23Q9P227 1491 aa19.05■□□□□ 0.64
HERC2-207ENST00000564734 NUTM2FA1L443 756 aa19.05■□□□□ 0.64
HERC2-207ENST00000564734 HAP1P54257 671 aaPredicted RBP19.05■□□□□ 0.64
HERC2-207ENST00000564734 TBC1D9Q6ZT07 1266 aa19.05■□□□□ 0.64
HERC2-207ENST00000564734 ATP10DQ9P241 1426 aa19.05■□□□□ 0.64
HERC2-207ENST00000564734 SLIT1O75093 1534 aa19.05■□□□□ 0.64
HERC2-207ENST00000564734 MCM4P33991 863 aa19.05■□□□□ 0.64
HERC2-207ENST00000564734 TTC21AQ8NDW8 1320 aa19.05■□□□□ 0.64
HERC2-207ENST00000564734 CEP170BQ9Y4F5 1589 aaPredicted RBP19.04■□□□□ 0.64
HERC2-207ENST00000564734 ANKRD44Q8N8A2 993 aa19.03■□□□□ 0.64
HERC2-207ENST00000564734 PTPRCP08575 1304 aa19.03■□□□□ 0.64
HERC2-207ENST00000564734 MAP3K19Q56UN5 1328 aa19.03■□□□□ 0.64
HERC2-207ENST00000564734 PLEKHM2Q8IWE5 1019 aa19.03■□□□□ 0.64
HERC2-207ENST00000564734 AMOTL2Q9Y2J4 779 aa19.02■□□□□ 0.64
HERC2-207ENST00000564734 GSPT1P15170 499 aaKnown RBP19.02■□□□□ 0.63
HERC2-207ENST00000564734 TBX22Q9Y458 520 aa19.02■□□□□ 0.63
HERC2-207ENST00000564734 RBM33Q96EV2 1170 aaKnown RBP19.01■□□□□ 0.63
HERC2-207ENST00000564734 KDRP35968 1356 aa19.01■□□□□ 0.63
HERC2-207ENST00000564734 SBNO1A3KN83 1393 aa19.01■□□□□ 0.63
HERC2-207ENST00000564734 RPAP2Q8IXW5 612 aaPredicted RBP19■□□□□ 0.63
HERC2-207ENST00000564734 FMN2Q9NZ56 1722 aa19■□□□□ 0.63
HERC2-207ENST00000564734 MTHFSDQ2M296 383 aaKnown RBP19■□□□□ 0.63
HERC2-207ENST00000564734 CEP85Q6P2H3 762 aa19■□□□□ 0.63
HERC2-207ENST00000564734 CDC45O75419 566 aa18.99■□□□□ 0.63
HERC2-207ENST00000564734 RTL1A6NKG5 1358 aa18.99■□□□□ 0.63
HERC2-207ENST00000564734 FLT4P35916 1363 aa18.99■□□□□ 0.63
HERC2-207ENST00000564734 DIP2AQ14689 1571 aa18.99■□□□□ 0.63
HERC2-207ENST00000564734 MSH6P52701 1360 aa18.98■□□□□ 0.63
HERC2-207ENST00000564734 FOXO3O43524 673 aa18.98■□□□□ 0.63
HERC2-207ENST00000564734 TTC22Q5TAA0 569 aa18.97■□□□□ 0.63
HERC2-207ENST00000564734 IGSF1Q8N6C5 1336 aa18.97■□□□□ 0.63
HERC2-207ENST00000564734 RTN4Q9NQC3 1192 aaKnown RBP18.97■□□□□ 0.63
HERC2-207ENST00000564734 C16orf71Q8IYS4 520 aaPredicted RBP18.96■□□□□ 0.63
HERC2-207ENST00000564734 PIK3C2AO00443 1686 aa18.96■□□□□ 0.63
HERC2-207ENST00000564734 CD2BP2O95400 341 aaKnown RBP18.96■□□□□ 0.63
HERC2-207ENST00000564734 SOX12O15370 315 aa18.96■□□□□ 0.63
HERC2-207ENST00000564734 EYA1Q99502 592 aa18.96■□□□□ 0.63
HERC2-207ENST00000564734 CIZ1Q9ULV3 898 aaPredicted RBP18.96■□□□□ 0.63
HERC2-207ENST00000564734 SLC4A2P04920 1241 aa18.95■□□□□ 0.62
HERC2-207ENST00000564734 MEIS3Q99687 375 aa18.95■□□□□ 0.62
HERC2-207ENST00000564734 MIS18AQ9NYP9 233 aa18.95■□□□□ 0.62
HERC2-207ENST00000564734 RGPD8O14715 1765 aaPredicted RBP18.94■□□□□ 0.62
HERC2-207ENST00000564734 XRN1Q8IZH2 1706 aaKnown RBP18.94■□□□□ 0.62
HERC2-207ENST00000564734 C14orf37Q86TY3 774 aa18.94■□□□□ 0.62
HERC2-207ENST00000564734 FSD2A1L4K1 749 aa18.93■□□□□ 0.62
HERC2-207ENST00000564734 LRRC37A3O60309 1634 aa18.93■□□□□ 0.62
HERC2-207ENST00000564734 OTUD7AQ8TE49 926 aaPredicted RBP18.93■□□□□ 0.62
HERC2-207ENST00000564734 TRAK2O60296 914 aa18.92■□□□□ 0.62
HERC2-207ENST00000564734 L1TD1Q5T7N2 865 aaKnown RBP18.92■□□□□ 0.62
HERC2-207ENST00000564734 G2E3Q7L622 706 aa18.92■□□□□ 0.62
HERC2-207ENST00000564734 NGDNQ8NEJ9 315 aaKnown RBP18.92■□□□□ 0.62
HERC2-207ENST00000564734 RBM42Q9BTD8 480 aaKnown RBP18.92■□□□□ 0.62
HERC2-207ENST00000564734 TSPYL4Q9UJ04 414 aa18.92■□□□□ 0.62
HERC2-207ENST00000564734 HTATSF1O43719 755 aaKnown RBP18.92■□□□□ 0.62
HERC2-207ENST00000564734 HSP90AB1P08238 724 aaKnown RBP18.92■□□□□ 0.62
HERC2-207ENST00000564734 GAS2L2Q8NHY3 880 aa18.92■□□□□ 0.62
HERC2-207ENST00000564734 RTF1Q92541 710 aaKnown RBP18.92■□□□□ 0.62
HERC2-207ENST00000564734 MARF1Q9Y4F3 1742 aaKnown RBP18.92■□□□□ 0.62
HERC2-207ENST00000564734 ANKARQ7Z5J8 1434 aa18.92■□□□□ 0.62
HERC2-207ENST00000564734 K7ELQ4 463 aaPredicted RBP18.91■□□□□ 0.62
HERC2-207ENST00000564734 EIF5BO60841 1220 aaKnown RBP18.91■□□□□ 0.62
HERC2-207ENST00000564734 NWD1Q149M9 1564 aa18.91■□□□□ 0.62
HERC2-207ENST00000564734 RAB3GAP1Q15042 981 aa18.91■□□□□ 0.62
HERC2-207ENST00000564734 USP54Q70EL1 1684 aa18.91■□□□□ 0.62
HERC2-207ENST00000564734 DDX11L8A8MPP1 907 aa18.9■□□□□ 0.62
HERC2-207ENST00000564734 AMPHP49418 695 aa18.9■□□□□ 0.62
HERC2-207ENST00000564734 TNPO1Q92973 898 aaKnown RBP18.9■□□□□ 0.62
HERC2-207ENST00000564734 SMARCA5O60264 1052 aaPredicted RBP18.89■□□□□ 0.61
HERC2-207ENST00000564734 CCT4P50991 539 aaKnown RBP18.89■□□□□ 0.61
HERC2-207ENST00000564734 USP26Q9BXU7 913 aa18.89■□□□□ 0.61
HERC2-207ENST00000564734 SDSP20132 328 aa18.88■□□□□ 0.61
HERC2-207ENST00000564734 F6X3S4 739 aa18.87■□□□□ 0.61
HERC2-207ENST00000564734 HOXC9P31274 260 aa18.87■□□□□ 0.61
HERC2-207ENST00000564734 NPHP4O75161 1426 aaPredicted RBP18.87■□□□□ 0.61
HERC2-207ENST00000564734 KCNA6P17658 529 aa18.87■□□□□ 0.61
HERC2-207ENST00000564734 NLRP6P59044 892 aa18.86■□□□□ 0.61
HERC2-207ENST00000564734 OSBPL3Q9H4L5 887 aa18.86■□□□□ 0.61
HERC2-207ENST00000564734 LMTK3Q96Q04 1460 aa18.86■□□□□ 0.61
HERC2-207ENST00000564734 GOLGA6L3A6NEY3 463 aa18.85■□□□□ 0.61
HERC2-207ENST00000564734 XRCC6P12956 609 aaKnown RBP eCLIP18.85■□□□□ 0.61
HERC2-207ENST00000564734 RABEP1Q15276 862 aa18.85■□□□□ 0.61
HERC2-207ENST00000564734 HMMRO75330 724 aa18.85■□□□□ 0.61
HERC2-207ENST00000564734 GNAT3A8MTJ3 354 aa18.85■□□□□ 0.61
HERC2-207ENST00000564734 FAM208AQ9UK61 1670 aaKnown RBP18.85■□□□□ 0.61
HERC2-207ENST00000564734 GZF1Q9H116 711 aaPredicted RBP18.84■□□□□ 0.61
HERC2-207ENST00000564734 SLC4A10Q6U841 1118 aa18.84■□□□□ 0.61
HERC2-207ENST00000564734 FAM43AQ8N2R8 423 aa18.84■□□□□ 0.61
HERC2-207ENST00000564734 CLEC17AQ6ZS10 378 aa18.83■□□□□ 0.61
HERC2-207ENST00000564734 IL17REQ8NFR9 667 aa18.83■□□□□ 0.61
HERC2-207ENST00000564734 SOS1Q07889 1333 aaPredicted RBP18.83■□□□□ 0.6
HERC2-207ENST00000564734 BABAM1Q9NWV8 329 aa18.83■□□□□ 0.6
HERC2-207ENST00000564734 SALL3Q9BXA9 1300 aa18.83■□□□□ 0.6
HERC2-207ENST00000564734 GBP4Q96PP9 640 aa18.83■□□□□ 0.6
HERC2-207ENST00000564734 GNAI2P04899 355 aa18.82■□□□□ 0.6
HERC2-207ENST00000564734 ZNF142P52746 1687 aaPredicted RBP18.82■□□□□ 0.6
HERC2-207ENST00000564734 MAP3K5Q99683 1374 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms