RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 MCM10Q7L590 875 aa15.02■□□□□ -0
COMMD4-209ENST00000564068 MAGI3Q5TCQ9 1506 aa15.02□□□□□ -0.01
COMMD4-209ENST00000564068 MX1P20591 662 aa15.02□□□□□ -0.01
COMMD4-209ENST00000564068 PRIMPOLQ96LW4 560 aa15.02□□□□□ -0.01
COMMD4-209ENST00000564068 FSD1Q9BTV5 496 aa15.02□□□□□ -0.01
COMMD4-209ENST00000564068 ABCA5Q8WWZ7 1642 aa15.02□□□□□ -0.01
COMMD4-209ENST00000564068 CASTP20810 708 aaKnown RBP15.02□□□□□ -0.01
COMMD4-209ENST00000564068 CCT4P50991 539 aaKnown RBP15.02□□□□□ -0.01
COMMD4-209ENST00000564068 HS1BP3Q53T59 392 aa15.02□□□□□ -0.01
COMMD4-209ENST00000564068 ZMYM4Q5VZL5 1548 aa15.01□□□□□ -0.01
COMMD4-209ENST00000564068 TSC1Q92574 1164 aa15.01□□□□□ -0.01
COMMD4-209ENST00000564068 SPATA32Q96LK8 384 aa15.01□□□□□ -0.01
COMMD4-209ENST00000564068 ASXL1Q8IXJ9 1541 aa15.01□□□□□ -0.01
COMMD4-209ENST00000564068 PBRM1Q86U86 1689 aa15.01□□□□□ -0.01
COMMD4-209ENST00000564068 TNNT1P13805 278 aa15.01□□□□□ -0.01
COMMD4-209ENST00000564068 FAM177A1Q8N128 213 aaPredicted RBP15.01□□□□□ -0.01
COMMD4-209ENST00000564068 BLMP54132 1417 aaPredicted RBP15.01□□□□□ -0.01
COMMD4-209ENST00000564068 PSMA5P28066 241 aa15.01□□□□□ -0.01
COMMD4-209ENST00000564068 THEMISQ8N1K5 641 aaPredicted RBP15.01□□□□□ -0.01
COMMD4-209ENST00000564068 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.01□□□□□ -0.01
COMMD4-209ENST00000564068 PES1O00541 588 aaKnown RBP15□□□□□ -0.01
COMMD4-209ENST00000564068 CPLX1O14810 134 aa15□□□□□ -0.01
COMMD4-209ENST00000564068 CCDC30Q5VVM6 783 aa15□□□□□ -0.01
COMMD4-209ENST00000564068 SLC26A8Q96RN1 970 aa15□□□□□ -0.01
COMMD4-209ENST00000564068 PDRG1Q9NUG6 133 aa15□□□□□ -0.01
COMMD4-209ENST00000564068 FAM83GA6ND36 823 aa15□□□□□ -0.01
COMMD4-209ENST00000564068 TOMM22Q9NS69 142 aa15□□□□□ -0.01
COMMD4-209ENST00000564068 ABCC11Q96J66 1382 aa15□□□□□ -0.01
COMMD4-209ENST00000564068 WDR7Q9Y4E6 1490 aa15□□□□□ -0.01
COMMD4-209ENST00000564068 C17orf53Q8N3J3 647 aaPredicted RBP15□□□□□ -0.01
COMMD4-209ENST00000564068 PDILTQ8N807 584 aa15□□□□□ -0.01
COMMD4-209ENST00000564068 TRMT1Q9NXH9 659 aaKnown RBP15□□□□□ -0.01
COMMD4-209ENST00000564068 USP19O94966 1318 aa14.99□□□□□ -0.01
COMMD4-209ENST00000564068 FBXO31Q5XUX0 539 aaPredicted RBP14.99□□□□□ -0.01
COMMD4-209ENST00000564068 USP48Q86UV5 1035 aa14.99□□□□□ -0.01
COMMD4-209ENST00000564068 AEBP1Q8IUX7 1158 aa14.99□□□□□ -0.01
COMMD4-209ENST00000564068 NAT10Q9H0A0 1025 aaKnown RBP14.99□□□□□ -0.01
COMMD4-209ENST00000564068 SLC52A1Q9NWF4 448 aa14.99□□□□□ -0.01
COMMD4-209ENST00000564068 EMILIN1Q9Y6C2 1016 aa14.99□□□□□ -0.01
COMMD4-209ENST00000564068 SRGAP3O43295 1099 aa14.99□□□□□ -0.01
COMMD4-209ENST00000564068 AIMP1Q12904 312 aaKnown RBP14.99□□□□□ -0.01
COMMD4-209ENST00000564068 TFIP11Q9UBB9 837 aaKnown RBP14.99□□□□□ -0.01
COMMD4-209ENST00000564068 ABCC2Q92887 1545 aa14.99□□□□□ -0.01
COMMD4-209ENST00000564068 MBIPQ9NS73 344 aa14.99□□□□□ -0.01
COMMD4-209ENST00000564068 NUTM2GQ5VZR2 741 aa14.98□□□□□ -0.01
COMMD4-209ENST00000564068 TSPYL6Q8N831 410 aa14.98□□□□□ -0.01
COMMD4-209ENST00000564068 PIK3C2GO75747 1445 aa14.98□□□□□ -0.01
COMMD4-209ENST00000564068 UHRF1BP1Q6BDS2 1440 aa14.98□□□□□ -0.01
COMMD4-209ENST00000564068 CCDC94Q9BW85 323 aaPredicted RBP14.98□□□□□ -0.01
COMMD4-209ENST00000564068 CHAMP1Q96JM3 812 aa14.98□□□□□ -0.01
COMMD4-209ENST00000564068 KDM4AO75164 1064 aa14.97□□□□□ -0.01
COMMD4-209ENST00000564068 SKIDA1Q1XH10 827 aa14.97□□□□□ -0.01
COMMD4-209ENST00000564068 CNPY2Q9Y2B0 182 aa14.97□□□□□ -0.01
COMMD4-209ENST00000564068 IDI1Q13907 227 aa14.97□□□□□ -0.01
COMMD4-209ENST00000564068 PTPN14Q15678 1187 aa14.97□□□□□ -0.01
COMMD4-209ENST00000564068 SYNE3Q6ZMZ3 975 aa14.97□□□□□ -0.01
COMMD4-209ENST00000564068 POLR3AO14802 1390 aaPredicted RBP14.97□□□□□ -0.01
COMMD4-209ENST00000564068 HSPA2P54652 639 aa14.97□□□□□ -0.01
COMMD4-209ENST00000564068 CCDC34Q96HJ3 373 aa14.97□□□□□ -0.01
COMMD4-209ENST00000564068 SRCIN1Q9C0H9 1055 aa14.97□□□□□ -0.01
COMMD4-209ENST00000564068 STX6O43752 255 aa14.97□□□□□ -0.01
COMMD4-209ENST00000564068 ME1P48163 572 aa14.97□□□□□ -0.01
COMMD4-209ENST00000564068 MEIS3Q99687 375 aa14.97□□□□□ -0.01
COMMD4-209ENST00000564068 SYCP2Q9BX26 1530 aa14.96□□□□□ -0.01
COMMD4-209ENST00000564068 HDGFL1Q5TGJ6 251 aa14.96□□□□□ -0.01
COMMD4-209ENST00000564068 PRPF40BQ6NWY9 871 aaKnown RBP14.96□□□□□ -0.01
COMMD4-209ENST00000564068 DDX11Q96FC9 970 aa14.96□□□□□ -0.01
COMMD4-209ENST00000564068 SPG7Q9UQ90 795 aa14.96□□□□□ -0.01
COMMD4-209ENST00000564068 COL17A1Q9UMD9 1497 aaPredicted RBP14.96□□□□□ -0.01
COMMD4-209ENST00000564068 PLEKHM2Q8IWE5 1019 aa14.96□□□□□ -0.01
COMMD4-209ENST00000564068 ERBB4Q15303 1308 aa14.96□□□□□ -0.01
COMMD4-209ENST00000564068 CSB-PGBD3P0DP91 1061 aa14.96□□□□□ -0.02
COMMD4-209ENST00000564068 BLOC1S2Q6QNY1 142 aa14.96□□□□□ -0.02
COMMD4-209ENST00000564068 ANKLE2Q86XL3 938 aa14.96□□□□□ -0.02
COMMD4-209ENST00000564068 USP26Q9BXU7 913 aa14.96□□□□□ -0.02
COMMD4-209ENST00000564068 SAMD9Q5K651 1589 aa14.96□□□□□ -0.02
COMMD4-209ENST00000564068 PKP1Q13835 747 aa14.95□□□□□ -0.02
COMMD4-209ENST00000564068 TAF7LQ5H9L4 462 aa14.95□□□□□ -0.02
COMMD4-209ENST00000564068 OTUD7AQ8TE49 926 aaPredicted RBP14.95□□□□□ -0.02
COMMD4-209ENST00000564068 LMBRD1Q9NUN5 540 aa14.95□□□□□ -0.02
COMMD4-209ENST00000564068 LIMCH1Q9UPQ0 1083 aa14.95□□□□□ -0.02
COMMD4-209ENST00000564068 TRAPPC8Q9Y2L5 1435 aa14.95□□□□□ -0.02
COMMD4-209ENST00000564068 ZNF445P59923 1031 aa14.95□□□□□ -0.02
COMMD4-209ENST00000564068 CLIP2Q9UDT6 1046 aa14.95□□□□□ -0.02
COMMD4-209ENST00000564068 NEXNQ0ZGT2 675 aa14.95□□□□□ -0.02
COMMD4-209ENST00000564068 UVSSAQ2YD98 709 aa14.95□□□□□ -0.02
COMMD4-209ENST00000564068 TTLL5Q6EMB2 1281 aa14.95□□□□□ -0.02
COMMD4-209ENST00000564068 UBE2HP62256 183 aa14.94□□□□□ -0.02
COMMD4-209ENST00000564068 PROSER2Q86WR7 435 aaPredicted RBP14.94□□□□□ -0.02
COMMD4-209ENST00000564068 C8orf58Q8NAV2 365 aa14.94□□□□□ -0.02
COMMD4-209ENST00000564068 CCDC186Q7Z3E2 898 aa14.94□□□□□ -0.02
COMMD4-209ENST00000564068 CHD1O14646 1710 aa14.94□□□□□ -0.02
COMMD4-209ENST00000564068 SIL1Q9H173 461 aa14.94□□□□□ -0.02
COMMD4-209ENST00000564068 TMEM63CQ9P1W3 806 aa14.94□□□□□ -0.02
COMMD4-209ENST00000564068 CD2BP2O95400 341 aaKnown RBP14.93□□□□□ -0.02
COMMD4-209ENST00000564068 WAPLQ7Z5K2 1190 aa14.93□□□□□ -0.02
COMMD4-209ENST00000564068 NEUROD6Q96NK8 337 aa14.93□□□□□ -0.02
COMMD4-209ENST00000564068 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.93□□□□□ -0.02
COMMD4-209ENST00000564068 V9GYY5 206 aaPredicted RBP14.93□□□□□ -0.02
COMMD4-209ENST00000564068 ZNF521Q96K83 1311 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms