RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 ANP32AP39687 249 aaKnown RBP16.1■□□□□ 0.17
AC055717.2-201ENST00000561864 ITPRIPQ8IWB1 547 aa16.1■□□□□ 0.17
AC055717.2-201ENST00000561864 TSPYL6Q8N831 410 aa16.1■□□□□ 0.17
AC055717.2-201ENST00000561864 ORAI2Q96SN7 254 aa16.1■□□□□ 0.17
AC055717.2-201ENST00000561864 PCDHB15Q9Y5E8 787 aa16.1■□□□□ 0.17
AC055717.2-201ENST00000561864 TMEM94Q12767 1356 aa16.1■□□□□ 0.17
AC055717.2-201ENST00000561864 NCAPD2Q15021 1401 aa16.1■□□□□ 0.17
AC055717.2-201ENST00000561864 MCM10Q7L590 875 aa16.09■□□□□ 0.17
AC055717.2-201ENST00000561864 TMEM57Q8N5G2 664 aa16.09■□□□□ 0.17
AC055717.2-201ENST00000561864 C8orf58Q8NAV2 365 aa16.09■□□□□ 0.17
AC055717.2-201ENST00000561864 API5Q9BZZ5 524 aaKnown RBP16.09■□□□□ 0.17
AC055717.2-201ENST00000561864 VIRMAQ69YN4 1812 aaKnown RBP16.09■□□□□ 0.17
AC055717.2-201ENST00000561864 MAP3K5Q99683 1374 aa16.09■□□□□ 0.17
AC055717.2-201ENST00000561864 ATF3P18847 181 aa16.08■□□□□ 0.16
AC055717.2-201ENST00000561864 ABCC4O15439 1325 aa16.08■□□□□ 0.16
AC055717.2-201ENST00000561864 HDAC1Q13547 482 aaPredicted RBP16.07■□□□□ 0.16
AC055717.2-201ENST00000561864 KRT28Q7Z3Y7 464 aa16.07■□□□□ 0.16
AC055717.2-201ENST00000561864 BABAM1Q9NWV8 329 aa16.07■□□□□ 0.16
AC055717.2-201ENST00000561864 MSH6P52701 1360 aa16.07■□□□□ 0.16
AC055717.2-201ENST00000561864 ABCC6O95255 1503 aa16.07■□□□□ 0.16
AC055717.2-201ENST00000561864 LMO7Q8WWI1 1683 aa16.07■□□□□ 0.16
AC055717.2-201ENST00000561864 MED1Q15648 1581 aaPredicted RBP16.06■□□□□ 0.16
AC055717.2-201ENST00000561864 SOS1Q07889 1333 aaPredicted RBP16.06■□□□□ 0.16
AC055717.2-201ENST00000561864 FOXO3O43524 673 aa16.06■□□□□ 0.16
AC055717.2-201ENST00000561864 FAM161AQ3B820 660 aa16.06■□□□□ 0.16
AC055717.2-201ENST00000561864 ZBTB40Q9NUA8 1239 aa16.06■□□□□ 0.16
AC055717.2-201ENST00000561864 GNAT3A8MTJ3 354 aa16.05■□□□□ 0.16
AC055717.2-201ENST00000561864 CADPS2Q86UW7 1296 aa16.05■□□□□ 0.16
AC055717.2-201ENST00000561864 ARHGEF25Q86VW2 580 aa16.05■□□□□ 0.16
AC055717.2-201ENST00000561864 SKAP1Q86WV1 359 aa16.05■□□□□ 0.16
AC055717.2-201ENST00000561864 LTBP4Q8N2S1 1624 aa16.05■□□□□ 0.16
AC055717.2-201ENST00000561864 XIRP1Q702N8 1843 aaKnown RBP16.04■□□□□ 0.16
AC055717.2-201ENST00000561864 GCP02774 474 aa16.04■□□□□ 0.16
AC055717.2-201ENST00000561864 LTV1Q96GA3 475 aaPredicted RBP16.04■□□□□ 0.16
AC055717.2-201ENST00000561864 FAM208AQ9UK61 1670 aaKnown RBP16.04■□□□□ 0.16
AC055717.2-201ENST00000561864 PTPRCP08575 1304 aa16.03■□□□□ 0.16
AC055717.2-201ENST00000561864 ELL2O00472 640 aaPredicted RBP16.03■□□□□ 0.16
AC055717.2-201ENST00000561864 RGS3P49796 1198 aa16.03■□□□□ 0.16
AC055717.2-201ENST00000561864 TSPYL4Q9UJ04 414 aa16.03■□□□□ 0.16
AC055717.2-201ENST00000561864 OVOS2A0A0G2JMS6 1433 aa16.02■□□□□ 0.16
AC055717.2-201ENST00000561864 CERKQ8TCT0 537 aa16.02■□□□□ 0.16
AC055717.2-201ENST00000561864 RGPD2P0DJD1 1756 aa16.02■□□□□ 0.15
AC055717.2-201ENST00000561864 CRYBG1Q9Y4K1 1723 aa16.02■□□□□ 0.15
AC055717.2-201ENST00000561864 TNS3Q68CZ2 1445 aa16.02■□□□□ 0.15
AC055717.2-201ENST00000561864 NPHP3Q7Z494 1330 aa16.01■□□□□ 0.15
AC055717.2-201ENST00000561864 MSH5O43196 834 aa16.01■□□□□ 0.15
AC055717.2-201ENST00000561864 XPCQ01831 940 aaPredicted RBP16.01■□□□□ 0.15
AC055717.2-201ENST00000561864 PXDNQ92626 1479 aa16.01■□□□□ 0.15
AC055717.2-201ENST00000561864 RGS12O14924 1447 aa16.01■□□□□ 0.15
AC055717.2-201ENST00000561864 C8orf34Q49A92 452 aa16■□□□□ 0.15
AC055717.2-201ENST00000561864 NBPF6Q5VWK0 638 aa16■□□□□ 0.15
AC055717.2-201ENST00000561864 NBPF4Q96M43 638 aa16■□□□□ 0.15
AC055717.2-201ENST00000561864 PDZRN3Q9UPQ7 1066 aa16■□□□□ 0.15
AC055717.2-201ENST00000561864 CEMIPQ8WUJ3 1361 aa16■□□□□ 0.15
AC055717.2-201ENST00000561864 PLEKHG2Q9H7P9 1386 aa16■□□□□ 0.15
AC055717.2-201ENST00000561864 ZBTB7BO15156 539 aaPredicted RBP15.99■□□□□ 0.15
AC055717.2-201ENST00000561864 SMC5Q8IY18 1101 aa15.99■□□□□ 0.15
AC055717.2-201ENST00000561864 IPO9Q96P70 1041 aaKnown RBP15.99■□□□□ 0.15
AC055717.2-201ENST00000561864 KDM3BQ7LBC6 1761 aa15.99■□□□□ 0.15
AC055717.2-201ENST00000561864 AMOTQ4VCS5 1084 aa15.98■□□□□ 0.15
AC055717.2-201ENST00000561864 INTS3Q68E01 1043 aaKnown RBP15.98■□□□□ 0.15
AC055717.2-201ENST00000561864 LMOD2Q6P5Q4 547 aa15.98■□□□□ 0.15
AC055717.2-201ENST00000561864 USHBP1Q8N6Y0 703 aa15.98■□□□□ 0.15
AC055717.2-201ENST00000561864 N4BP2Q86UW6 1770 aaPredicted RBP15.98■□□□□ 0.15
AC055717.2-201ENST00000561864 ZBTB7CA1YPR0 619 aa15.97■□□□□ 0.15
AC055717.2-201ENST00000561864 TAF7Q15545 349 aaPredicted RBP15.97■□□□□ 0.15
AC055717.2-201ENST00000561864 KRT24Q2M2I5 525 aa15.97■□□□□ 0.15
AC055717.2-201ENST00000561864 PLEKHO1Q53GL0 409 aaPredicted RBP15.97■□□□□ 0.15
AC055717.2-201ENST00000561864 ERICH6Q7L0X2 663 aa15.97■□□□□ 0.15
AC055717.2-201ENST00000561864 ANKRD24Q8TF21 1146 aa15.97■□□□□ 0.15
AC055717.2-201ENST00000561864 COL18A1P39060 1754 aa15.97■□□□□ 0.15
AC055717.2-201ENST00000561864 ADAMTS7Q9UKP4 1686 aa15.96■□□□□ 0.15
AC055717.2-201ENST00000561864 IL17REQ8NFR9 667 aa15.96■□□□□ 0.15
AC055717.2-201ENST00000561864 AKAP4Q5JQC9 854 aa15.95■□□□□ 0.14
AC055717.2-201ENST00000561864 DDRGK1Q96HY6 314 aa15.95■□□□□ 0.14
AC055717.2-201ENST00000561864 NOP58Q9Y2X3 529 aaKnown RBP15.95■□□□□ 0.14
AC055717.2-201ENST00000561864 RGPD5Q99666 1765 aa15.95■□□□□ 0.14
AC055717.2-201ENST00000561864 GCC1Q96CN9 775 aa15.94■□□□□ 0.14
AC055717.2-201ENST00000561864 STK31Q9BXU1 1019 aa15.94■□□□□ 0.14
AC055717.2-201ENST00000561864 CHMP4AQ9BY43 222 aa15.94■□□□□ 0.14
AC055717.2-201ENST00000561864 MIS18AQ9NYP9 233 aa15.94■□□□□ 0.14
AC055717.2-201ENST00000561864 SPATA31A3Q5VYP0 1347 aa15.94■□□□□ 0.14
AC055717.2-201ENST00000561864 CACNA1FO60840 1977 aa15.93■□□□□ 0.14
AC055717.2-201ENST00000561864 PXDNLA1KZ92 1463 aa15.93■□□□□ 0.14
AC055717.2-201ENST00000561864 CPDO75976 1380 aa15.93■□□□□ 0.14
AC055717.2-201ENST00000561864 CCDC30Q5VVM6 783 aa15.93■□□□□ 0.14
AC055717.2-201ENST00000561864 ZNF530Q6P9A1 599 aaPredicted RBP15.93■□□□□ 0.14
AC055717.2-201ENST00000561864 NPM2Q86SE8 214 aaKnown RBP15.93■□□□□ 0.14
AC055717.2-201ENST00000561864 LRRC59Q96AG4 307 aaKnown RBP15.93■□□□□ 0.14
AC055717.2-201ENST00000561864 ANP32EQ9BTT0 268 aa15.93■□□□□ 0.14
AC055717.2-201ENST00000561864 ERBB3P21860 1342 aa15.93■□□□□ 0.14
AC055717.2-201ENST00000561864 HOXB7P09629 217 aa15.92■□□□□ 0.14
AC055717.2-201ENST00000561864 NUCB1Q02818 461 aa15.92■□□□□ 0.14
AC055717.2-201ENST00000561864 SIPA1L3O60292 1781 aaPredicted RBP15.92■□□□□ 0.14
AC055717.2-201ENST00000561864 SLC4A2P04920 1241 aa15.91■□□□□ 0.14
AC055717.2-201ENST00000561864 CCT4P50991 539 aaKnown RBP15.91■□□□□ 0.14
AC055717.2-201ENST00000561864 C1orf141Q5JVX7 400 aa15.9■□□□□ 0.14
AC055717.2-201ENST00000561864 ZBTB47Q9UFB7 747 aaPredicted RBP15.9■□□□□ 0.14
AC055717.2-201ENST00000561864 ATP10DQ9P241 1426 aa15.9■□□□□ 0.14
AC055717.2-201ENST00000561864 AXIN2Q9Y2T1 843 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms