RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 TMEM57Q8N5G2 664 aa17.39■□□□□ 0.37
RABGGTA-220ENST00000560998 MBIPQ9NS73 344 aa17.39■□□□□ 0.37
RABGGTA-220ENST00000560998 PRDM4Q9UKN5 801 aa17.39■□□□□ 0.37
RABGGTA-220ENST00000560998 VAMP4O75379 141 aa17.39■□□□□ 0.37
RABGGTA-220ENST00000560998 PDZRN3Q9UPQ7 1066 aa17.39■□□□□ 0.37
RABGGTA-220ENST00000560998 OFD1O75665 1012 aa17.38■□□□□ 0.37
RABGGTA-220ENST00000560998 MTERF4Q7Z6M4 381 aaKnown RBP17.38■□□□□ 0.37
RABGGTA-220ENST00000560998 AEBP1Q8IUX7 1158 aa17.38■□□□□ 0.37
RABGGTA-220ENST00000560998 FMN2Q9NZ56 1722 aa17.37■□□□□ 0.37
RABGGTA-220ENST00000560998 SULT6B1Q6IMI4 303 aa17.37■□□□□ 0.37
RABGGTA-220ENST00000560998 CFAP44Q96MT7 982 aa17.37■□□□□ 0.37
RABGGTA-220ENST00000560998 PPP1R9BQ96SB3 815 aa17.37■□□□□ 0.37
RABGGTA-220ENST00000560998 PIK3R4Q99570 1358 aa17.37■□□□□ 0.37
RABGGTA-220ENST00000560998 ANKARQ7Z5J8 1434 aa17.37■□□□□ 0.37
RABGGTA-220ENST00000560998 HDAC1Q13547 482 aaPredicted RBP17.37■□□□□ 0.37
RABGGTA-220ENST00000560998 ZSCAN30Q86W11 494 aa17.37■□□□□ 0.37
RABGGTA-220ENST00000560998 TSPYL6Q8N831 410 aa17.37■□□□□ 0.37
RABGGTA-220ENST00000560998 CIZ1Q9ULV3 898 aaPredicted RBP17.37■□□□□ 0.37
RABGGTA-220ENST00000560998 FAM83GA6ND36 823 aa17.36■□□□□ 0.37
RABGGTA-220ENST00000560998 HSP90AB2PQ58FF8 381 aa17.36■□□□□ 0.37
RABGGTA-220ENST00000560998 MRPL50Q8N5N7 158 aaKnown RBP17.36■□□□□ 0.37
RABGGTA-220ENST00000560998 PIK3C2AO00443 1686 aa17.36■□□□□ 0.37
RABGGTA-220ENST00000560998 KCNA6P17658 529 aa17.35■□□□□ 0.37
RABGGTA-220ENST00000560998 NGDNQ8NEJ9 315 aaKnown RBP17.35■□□□□ 0.37
RABGGTA-220ENST00000560998 ZBTB40Q9NUA8 1239 aa17.35■□□□□ 0.37
RABGGTA-220ENST00000560998 HSCBQ8IWL3 235 aa17.35■□□□□ 0.37
RABGGTA-220ENST00000560998 GBP4Q96PP9 640 aa17.35■□□□□ 0.37
RABGGTA-220ENST00000560998 IBTKQ9P2D0 1353 aaPredicted RBP17.34■□□□□ 0.37
RABGGTA-220ENST00000560998 ARHGAP45Q92619 1136 aa17.34■□□□□ 0.37
RABGGTA-220ENST00000560998 MAP3K19Q56UN5 1328 aa17.34■□□□□ 0.37
RABGGTA-220ENST00000560998 DDIT3P35638 169 aa17.33■□□□□ 0.37
RABGGTA-220ENST00000560998 DCTN1Q14203 1278 aa17.33■□□□□ 0.37
RABGGTA-220ENST00000560998 ARHGEF10O15013 1369 aa17.33■□□□□ 0.36
RABGGTA-220ENST00000560998 TWISTNBQ3B726 338 aaPredicted RBP17.33■□□□□ 0.36
RABGGTA-220ENST00000560998 HS1BP3Q53T59 392 aa17.33■□□□□ 0.36
RABGGTA-220ENST00000560998 SMAP1Q8IYB5 467 aaPredicted RBP17.33■□□□□ 0.36
RABGGTA-220ENST00000560998 C22orf23Q9BZE7 217 aa17.33■□□□□ 0.36
RABGGTA-220ENST00000560998 SBNO1A3KN83 1393 aa17.32■□□□□ 0.36
RABGGTA-220ENST00000560998 SOX12O15370 315 aa17.32■□□□□ 0.36
RABGGTA-220ENST00000560998 C8orf58Q8NAV2 365 aa17.32■□□□□ 0.36
RABGGTA-220ENST00000560998 ANP32BQ92688 251 aaKnown RBP17.32■□□□□ 0.36
RABGGTA-220ENST00000560998 ZNF142P52746 1687 aaPredicted RBP17.32■□□□□ 0.36
RABGGTA-220ENST00000560998 FLT4P35916 1363 aa17.31■□□□□ 0.36
RABGGTA-220ENST00000560998 CHD2O14647 1828 aaKnown RBP17.31■□□□□ 0.36
RABGGTA-220ENST00000560998 MARF1Q9Y4F3 1742 aaKnown RBP17.31■□□□□ 0.36
RABGGTA-220ENST00000560998 USP54Q70EL1 1684 aa17.3■□□□□ 0.36
RABGGTA-220ENST00000560998 ELL2O00472 640 aaPredicted RBP17.3■□□□□ 0.36
RABGGTA-220ENST00000560998 MSNP26038 577 aaKnown RBP17.3■□□□□ 0.36
RABGGTA-220ENST00000560998 SMC5Q8IY18 1101 aa17.29■□□□□ 0.36
RABGGTA-220ENST00000560998 SNX21Q969T3 373 aa17.29■□□□□ 0.36
RABGGTA-220ENST00000560998 ABCC4O15439 1325 aa17.28■□□□□ 0.36
RABGGTA-220ENST00000560998 CHL1O00533 1208 aa17.28■□□□□ 0.36
RABGGTA-220ENST00000560998 ANKLE2Q86XL3 938 aa17.28■□□□□ 0.36
RABGGTA-220ENST00000560998 ZBTB7BO15156 539 aaPredicted RBP17.27■□□□□ 0.36
RABGGTA-220ENST00000560998 MCM10Q7L590 875 aa17.27■□□□□ 0.36
RABGGTA-220ENST00000560998 ADAMTSL3P82987 1691 aa17.27■□□□□ 0.35
RABGGTA-220ENST00000560998 KDRP35968 1356 aa17.26■□□□□ 0.35
RABGGTA-220ENST00000560998 AMPHP49418 695 aa17.26■□□□□ 0.35
RABGGTA-220ENST00000560998 NLRP6P59044 892 aa17.26■□□□□ 0.35
RABGGTA-220ENST00000560998 GAS2L3Q86XJ1 694 aa17.26■□□□□ 0.35
RABGGTA-220ENST00000560998 SPRYD3Q8NCJ5 442 aa17.26■□□□□ 0.35
RABGGTA-220ENST00000560998 CHMP4BQ9H444 224 aaKnown RBP17.26■□□□□ 0.35
RABGGTA-220ENST00000560998 NASPP49321 788 aaPredicted RBP17.26■□□□□ 0.35
RABGGTA-220ENST00000560998 RBM10P98175 930 aaKnown RBP17.26■□□□□ 0.35
RABGGTA-220ENST00000560998 RAB3GAP1Q15042 981 aa17.26■□□□□ 0.35
RABGGTA-220ENST00000560998 DNAJC5Q9H3Z4 198 aa17.26■□□□□ 0.35
RABGGTA-220ENST00000560998 CRB1P82279 1406 aa17.25■□□□□ 0.35
RABGGTA-220ENST00000560998 IGSF1Q8N6C5 1336 aa17.25■□□□□ 0.35
RABGGTA-220ENST00000560998 API5Q9BZZ5 524 aaKnown RBP17.25■□□□□ 0.35
RABGGTA-220ENST00000560998 KIAA0232Q92628 1395 aa17.25■□□□□ 0.35
RABGGTA-220ENST00000560998 PLEKHG5O94827 1062 aa17.24■□□□□ 0.35
RABGGTA-220ENST00000560998 TNPO1Q92973 898 aaKnown RBP17.24■□□□□ 0.35
RABGGTA-220ENST00000560998 KIF24Q5T7B8 1368 aa17.24■□□□□ 0.35
RABGGTA-220ENST00000560998 ZNF500O60304 480 aaPredicted RBP17.24■□□□□ 0.35
RABGGTA-220ENST00000560998 EYA1Q99502 592 aa17.24■□□□□ 0.35
RABGGTA-220ENST00000560998 MTHFSDQ2M296 383 aaKnown RBP17.23■□□□□ 0.35
RABGGTA-220ENST00000560998 DYNC1I1O14576 645 aa17.22■□□□□ 0.35
RABGGTA-220ENST00000560998 RBM25P49756 843 aaKnown RBP17.22■□□□□ 0.35
RABGGTA-220ENST00000560998 HAP1P54257 671 aaPredicted RBP17.22■□□□□ 0.35
RABGGTA-220ENST00000560998 NUCB1Q02818 461 aa17.22■□□□□ 0.35
RABGGTA-220ENST00000560998 CSPP1Q1MSJ5 1256 aa17.22■□□□□ 0.35
RABGGTA-220ENST00000560998 SETD1BQ9UPS6 1966 aaKnown RBP17.22■□□□□ 0.35
RABGGTA-220ENST00000560998 UTP14CQ5TAP6 766 aaKnown RBP17.22■□□□□ 0.35
RABGGTA-220ENST00000560998 CLEC17AQ6ZS10 378 aa17.22■□□□□ 0.35
RABGGTA-220ENST00000560998 GOLGA6L22H0YM25 854 aa17.21■□□□□ 0.35
RABGGTA-220ENST00000560998 FOXO3O43524 673 aa17.21■□□□□ 0.35
RABGGTA-220ENST00000560998 HOXC9P31274 260 aa17.21■□□□□ 0.35
RABGGTA-220ENST00000560998 MFAP1P55081 439 aaKnown RBP17.21■□□□□ 0.35
RABGGTA-220ENST00000560998 KRT24Q2M2I5 525 aa17.21■□□□□ 0.35
RABGGTA-220ENST00000560998 NUTM2GQ5VZR2 741 aa17.21■□□□□ 0.35
RABGGTA-220ENST00000560998 PHF8Q9UPP1 1060 aa17.21■□□□□ 0.35
RABGGTA-220ENST00000560998 MCM5P33992 734 aa17.2■□□□□ 0.34
RABGGTA-220ENST00000560998 ABTB2Q8N961 1025 aa17.2■□□□□ 0.34
RABGGTA-220ENST00000560998 NWD1Q149M9 1564 aa17.2■□□□□ 0.34
RABGGTA-220ENST00000560998 GAS2L2Q8NHY3 880 aa17.2■□□□□ 0.34
RABGGTA-220ENST00000560998 NOL7Q9UMY1 257 aaKnown RBP17.2■□□□□ 0.34
RABGGTA-220ENST00000560998 C1orf115Q9H7X2 142 aa17.19■□□□□ 0.34
RABGGTA-220ENST00000560998 ADGRL3Q9HAR2 1447 aa17.19■□□□□ 0.34
RABGGTA-220ENST00000560998 KLHL40Q2TBA0 621 aa17.19■□□□□ 0.34
RABGGTA-220ENST00000560998 RTF1Q92541 710 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 1606.2 ms