RNA–Protein interactions for RNA: ENST00000560952.1

RNF111-211, Transcript of ring finger protein 111, humanhuman

TSL 1 (best)

Gene RNF111, Length 2,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-211ENST00000560952 UPP2O95045 317 aa3.95□□□□□ -1.78
RNF111-211ENST00000560952 SCARF1Q14162 830 aa3.95□□□□□ -1.78
RNF111-211ENST00000560952 RNF20Q5VTR2 975 aa3.95□□□□□ -1.78
RNF111-211ENST00000560952 CCDC116Q8IYX3 515 aa3.95□□□□□ -1.78
RNF111-211ENST00000560952 ADAM32Q8TC27 787 aa3.95□□□□□ -1.78
RNF111-211ENST00000560952 GJD4Q96KN9 370 aaPredicted RBP3.95□□□□□ -1.78
RNF111-211ENST00000560952 WDR4P57081 412 aaKnown RBP3.95□□□□□ -1.78
RNF111-211ENST00000560952 NR1H3Q13133 447 aa3.95□□□□□ -1.78
RNF111-211ENST00000560952 ZMYM1Q5SVZ6 1142 aa3.95□□□□□ -1.78
RNF111-211ENST00000560952 MTMR14Q8NCE2 650 aa3.95□□□□□ -1.78
RNF111-211ENST00000560952 KCTD15Q96SI1 283 aaPredicted RBP3.95□□□□□ -1.78
RNF111-211ENST00000560952 FSHRP23945 695 aa3.94□□□□□ -1.78
RNF111-211ENST00000560952 GRM5P41594 1212 aa3.94□□□□□ -1.78
RNF111-211ENST00000560952 LOC105371045A0A1W2PR82 267 aa3.94□□□□□ -1.78
RNF111-211ENST00000560952 ZIC2O95409 532 aaPredicted RBP3.94□□□□□ -1.78
RNF111-211ENST00000560952 WASHC4Q2M389 1173 aa3.94□□□□□ -1.78
RNF111-211ENST00000560952 EPS8L1Q8TE68 723 aa3.94□□□□□ -1.78
RNF111-211ENST00000560952 SUPT5HO00267 1087 aaKnown RBP3.93□□□□□ -1.78
RNF111-211ENST00000560952 TIMP2P16035 220 aa3.93□□□□□ -1.78
RNF111-211ENST00000560952 EIF4G2P78344 907 aaKnown RBP eCLIP3.93□□□□□ -1.78
RNF111-211ENST00000560952 SOX11P35716 441 aa3.92□□□□□ -1.78
RNF111-211ENST00000560952 TSEN34Q9BSV6 310 aaKnown RBP3.92□□□□□ -1.78
RNF111-211ENST00000560952 SNRKQ9NRH2 765 aa3.92□□□□□ -1.78
RNF111-211ENST00000560952 PCDHB9Q9Y5E1 797 aa3.92□□□□□ -1.78
RNF111-211ENST00000560952 RAD21O60216 631 aa3.92□□□□□ -1.78
RNF111-211ENST00000560952 INTS6LQ5JSJ4 861 aaKnown RBP3.92□□□□□ -1.78
RNF111-211ENST00000560952 MRPL14Q6P1L8 145 aaKnown RBP3.92□□□□□ -1.78
RNF111-211ENST00000560952 KLF16Q9BXK1 252 aaPredicted RBP3.92□□□□□ -1.78
RNF111-211ENST00000560952 ESPNB1AK53 854 aa3.91□□□□□ -1.78
RNF111-211ENST00000560952 FBXO45P0C2W1 286 aa3.91□□□□□ -1.78
RNF111-211ENST00000560952 PDIA4P13667 645 aaKnown RBP3.91□□□□□ -1.78
RNF111-211ENST00000560952 UBTFP17480 764 aaKnown RBP3.91□□□□□ -1.78
RNF111-211ENST00000560952 PPP1R26Q5T8A7 1209 aaPredicted RBP3.91□□□□□ -1.78
RNF111-211ENST00000560952 OCSTAMPQ9BR26 566 aa3.91□□□□□ -1.78
RNF111-211ENST00000560952 ZFP64Q9NPA5 681 aa3.91□□□□□ -1.78
RNF111-211ENST00000560952 NR3C2P08235 984 aa3.91□□□□□ -1.78
RNF111-211ENST00000560952 MCM6Q14566 821 aa3.91□□□□□ -1.78
RNF111-211ENST00000560952 MEIOBQ8N635 442 aa3.91□□□□□ -1.78
RNF111-211ENST00000560952 ITPKCQ96DU7 683 aa3.91□□□□□ -1.78
RNF111-211ENST00000560952 DCAF5Q96JK2 942 aa3.91□□□□□ -1.78
RNF111-211ENST00000560952 ESF1Q9H501 851 aaKnown RBP3.91□□□□□ -1.78
RNF111-211ENST00000560952 SCO2A0A1W2PP80 73 aa3.89□□□□□ -1.79
RNF111-211ENST00000560952 Q6ZVU0 165 aa3.89□□□□□ -1.79
RNF111-211ENST00000560952 TRIM46Q7Z4K8 759 aa3.89□□□□□ -1.79
RNF111-211ENST00000560952 LINC00528Q8N1L1 170 aa3.89□□□□□ -1.79
RNF111-211ENST00000560952 FMNL2Q96PY5 1086 aa3.89□□□□□ -1.79
RNF111-211ENST00000560952 ZFAND3Q9H8U3 227 aa3.89□□□□□ -1.79
RNF111-211ENST00000560952 TBC1D2BQ9UPU7 963 aa3.89□□□□□ -1.79
RNF111-211ENST00000560952 BMP2P12643 396 aa3.89□□□□□ -1.79
RNF111-211ENST00000560952 FAM9AQ8IZU1 332 aaPredicted RBP3.89□□□□□ -1.79
RNF111-211ENST00000560952 SIRT1Q96EB6 747 aa3.89□□□□□ -1.79
RNF111-211ENST00000560952 ABL2P42684 1182 aa3.88□□□□□ -1.79
RNF111-211ENST00000560952 ZFP42Q96MM3 310 aa3.88□□□□□ -1.79
RNF111-211ENST00000560952 CHMP4AQ9BY43 222 aa3.88□□□□□ -1.79
RNF111-211ENST00000560952 ERVH48-1M5A8F1 160 aa3.88□□□□□ -1.79
RNF111-211ENST00000560952 MYCP01106 439 aaPredicted RBP3.88□□□□□ -1.79
RNF111-211ENST00000560952 ADH1AP07327 375 aa3.88□□□□□ -1.79
RNF111-211ENST00000560952 BMP1P13497 986 aa3.88□□□□□ -1.79
RNF111-211ENST00000560952 SEMA3FQ13275 785 aa3.88□□□□□ -1.79
RNF111-211ENST00000560952 SLFNL1Q499Z3 407 aa3.88□□□□□ -1.79
RNF111-211ENST00000560952 CC2D2BQ6DHV5 1058 aa3.88□□□□□ -1.79
RNF111-211ENST00000560952 PURBQ96QR8 312 aaKnown RBP3.88□□□□□ -1.79
RNF111-211ENST00000560952 GDPD2Q9HCC8 539 aa3.88□□□□□ -1.79
RNF111-211ENST00000560952 GIGYF1O75420 1035 aaPredicted RBP3.87□□□□□ -1.79
RNF111-211ENST00000560952 VEGFBP49765 207 aa3.87□□□□□ -1.79
RNF111-211ENST00000560952 ARTNQ5T4W7 220 aa3.87□□□□□ -1.79
RNF111-211ENST00000560952 CYP2U1Q7Z449 544 aa3.87□□□□□ -1.79
RNF111-211ENST00000560952 UBE2Q2Q8WVN8 375 aa3.87□□□□□ -1.79
RNF111-211ENST00000560952 CEP126Q9P2H0 1117 aa3.87□□□□□ -1.79
RNF111-211ENST00000560952 SPINT1O43278 529 aa3.86□□□□□ -1.79
RNF111-211ENST00000560952 LZTS3O60299 673 aaPredicted RBP3.86□□□□□ -1.79
RNF111-211ENST00000560952 GPR37L1O60883 481 aa3.86□□□□□ -1.79
RNF111-211ENST00000560952 RAB15P59190 212 aa3.86□□□□□ -1.79
RNF111-211ENST00000560952 IRF5Q13568 498 aa3.86□□□□□ -1.79
RNF111-211ENST00000560952 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.86□□□□□ -1.79
RNF111-211ENST00000560952 MAP7D1Q3KQU3 841 aa3.86□□□□□ -1.79
RNF111-211ENST00000560952 C6orf118Q5T5N4 469 aa3.86□□□□□ -1.79
RNF111-211ENST00000560952 ZNF784Q8NCA9 323 aaPredicted RBP3.86□□□□□ -1.79
RNF111-211ENST00000560952 COG6Q9Y2V7 657 aa3.86□□□□□ -1.79
RNF111-211ENST00000560952 MAN1A2O60476 641 aa3.86□□□□□ -1.79
RNF111-211ENST00000560952 FURINP09958 794 aa3.86□□□□□ -1.79
RNF111-211ENST00000560952 PTGIRP43119 386 aa3.86□□□□□ -1.79
RNF111-211ENST00000560952 ERVK-9P63128 1117 aa3.86□□□□□ -1.79
RNF111-211ENST00000560952 ALYREFQ86V81 257 aaKnown RBP3.86□□□□□ -1.79
RNF111-211ENST00000560952 PCDHB11Q9Y5F2 797 aa3.86□□□□□ -1.79
RNF111-211ENST00000560952 TTLL8A6PVC2 850 aa3.85□□□□□ -1.79
RNF111-211ENST00000560952 ATP5J2-PTCD1G3V325 749 aa3.85□□□□□ -1.79
RNF111-211ENST00000560952 ARHGEF15O94989 841 aa3.85□□□□□ -1.79
RNF111-211ENST00000560952 USP4Q13107 963 aa3.85□□□□□ -1.79
RNF111-211ENST00000560952 RNF135Q8IUD6 432 aa3.85□□□□□ -1.79
RNF111-211ENST00000560952 SVOPQ8N4V2 548 aa3.85□□□□□ -1.79
RNF111-211ENST00000560952 SOS2Q07890 1332 aaPredicted RBP3.85□□□□□ -1.79
RNF111-211ENST00000560952 LILRA1O75019 489 aa3.85□□□□□ -1.79
RNF111-211ENST00000560952 CDK11BP21127 795 aaKnown RBP3.85□□□□□ -1.79
RNF111-211ENST00000560952 GPC1P35052 558 aa3.85□□□□□ -1.79
RNF111-211ENST00000560952 VAC14Q08AM6 782 aa3.85□□□□□ -1.79
RNF111-211ENST00000560952 CBLBQ13191 982 aa3.85□□□□□ -1.79
RNF111-211ENST00000560952 CCER1Q8TC90 406 aaPredicted RBP3.85□□□□□ -1.79
RNF111-211ENST00000560952 CYLDQ9NQC7 956 aa3.85□□□□□ -1.79
RNF111-211ENST00000560952 TMPRSS4Q9NRS4 437 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms