RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 TNS2Q63HR2 1409 aa16.07■□□□□ 0.16
RABGGTA-218ENST00000560777 DDX54Q8TDD1 881 aaKnown RBP16.06■□□□□ 0.16
RABGGTA-218ENST00000560777 MYBBP1AQ9BQG0 1328 aaKnown RBP16.05■□□□□ 0.16
RABGGTA-218ENST00000560777 RGPD1P0DJD0 1748 aa16.05■□□□□ 0.16
RABGGTA-218ENST00000560777 KDRP35968 1356 aa16.04■□□□□ 0.16
RABGGTA-218ENST00000560777 U2SURPO15042 1029 aaKnown RBP16.04■□□□□ 0.16
RABGGTA-218ENST00000560777 HMOX1P09601 288 aa16.04■□□□□ 0.16
RABGGTA-218ENST00000560777 CCDC125Q86Z20 511 aa16.04■□□□□ 0.16
RABGGTA-218ENST00000560777 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.04■□□□□ 0.164e-7■□□□□ 10.5
RABGGTA-218ENST00000560777 TRIM37O94972 964 aa16.03■□□□□ 0.16
RABGGTA-218ENST00000560777 NUDCQ9Y266 331 aa16.03■□□□□ 0.16
RABGGTA-218ENST00000560777 BCL9O00512 1426 aa16.02■□□□□ 0.16
RABGGTA-218ENST00000560777 CYP27B1O15528 508 aa16.02■□□□□ 0.16
RABGGTA-218ENST00000560777 SPG7Q9UQ90 795 aa16.02■□□□□ 0.16
RABGGTA-218ENST00000560777 PLEKHO1Q53GL0 409 aaPredicted RBP16.01■□□□□ 0.15
RABGGTA-218ENST00000560777 PCDH11XQ9BZA7 1347 aa16■□□□□ 0.15
RABGGTA-218ENST00000560777 PCDH11YQ9BZA8 1340 aa16■□□□□ 0.15
RABGGTA-218ENST00000560777 U2AF1L5P0DN76 240 aaPredicted RBP16■□□□□ 0.15
RABGGTA-218ENST00000560777 U2AF1Q01081 240 aaKnown RBP eCLIP16■□□□□ 0.15
RABGGTA-218ENST00000560777 PTF1AQ7RTS3 328 aa16■□□□□ 0.15
RABGGTA-218ENST00000560777 PLEKHG2Q9H7P9 1386 aa16■□□□□ 0.15
RABGGTA-218ENST00000560777 SHANK3Q9BYB0 1731 aa15.99■□□□□ 0.15
RABGGTA-218ENST00000560777 ANP32CO43423 234 aa15.99■□□□□ 0.15
RABGGTA-218ENST00000560777 KCNQ2O43526 872 aa15.99■□□□□ 0.15
RABGGTA-218ENST00000560777 AMOTQ4VCS5 1084 aa15.99■□□□□ 0.15
RABGGTA-218ENST00000560777 NKX1-1Q15270 411 aaPredicted RBP15.98■□□□□ 0.15
RABGGTA-218ENST00000560777 ACSBG1Q96GR2 724 aa15.98■□□□□ 0.15
RABGGTA-218ENST00000560777 BCL11BQ9C0K0 894 aaPredicted RBP15.98■□□□□ 0.15
RABGGTA-218ENST00000560777 PKD1L3Q7Z443 1732 aa15.97■□□□□ 0.15
RABGGTA-218ENST00000560777 FCHSD2O94868 740 aa15.97■□□□□ 0.15
RABGGTA-218ENST00000560777 PHKG2P15735 406 aa15.97■□□□□ 0.15
RABGGTA-218ENST00000560777 SF3B2Q13435 895 aaKnown RBP15.97■□□□□ 0.15
RABGGTA-218ENST00000560777 IFNL2Q8IZJ0 200 aa15.97■□□□□ 0.15
RABGGTA-218ENST00000560777 RSPH6AQ9H0K4 717 aa15.97■□□□□ 0.15
RABGGTA-218ENST00000560777 SBF2Q86WG5 1849 aa15.96■□□□□ 0.15
RABGGTA-218ENST00000560777 APBA3O96018 575 aa15.96■□□□□ 0.15
RABGGTA-218ENST00000560777 DEFB132Q7Z7B7 95 aa15.96■□□□□ 0.15
RABGGTA-218ENST00000560777 PRKAR2BP31323 418 aa15.95■□□□□ 0.14
RABGGTA-218ENST00000560777 PRIM1P49642 420 aaKnown RBP15.95■□□□□ 0.14
RABGGTA-218ENST00000560777 MTHFSDQ2M296 383 aaKnown RBP15.95■□□□□ 0.14
RABGGTA-218ENST00000560777 ZNF530Q6P9A1 599 aaPredicted RBP15.95■□□□□ 0.14
RABGGTA-218ENST00000560777 PHACTR3Q96KR7 559 aa15.95■□□□□ 0.14
RABGGTA-218ENST00000560777 CCDC184Q52MB2 194 aa15.94■□□□□ 0.14
RABGGTA-218ENST00000560777 KAT6BQ8WYB5 2073 aa15.93■□□□□ 0.14
RABGGTA-218ENST00000560777 BAG6P46379 1132 aa15.93■□□□□ 0.14
RABGGTA-218ENST00000560777 EN1Q05925 392 aaPredicted RBP15.93■□□□□ 0.14
RABGGTA-218ENST00000560777 C1orf141Q5JVX7 400 aa15.92■□□□□ 0.14
RABGGTA-218ENST00000560777 SYTL4Q96C24 671 aaPredicted RBP15.92■□□□□ 0.14
RABGGTA-218ENST00000560777 PLEKHF1Q96S99 279 aa15.92■□□□□ 0.14
RABGGTA-218ENST00000560777 TNS1Q9HBL0 1735 aaKnown RBP15.91■□□□□ 0.14
RABGGTA-218ENST00000560777 PLSCR1O15162 318 aa15.91■□□□□ 0.14
RABGGTA-218ENST00000560777 HSP90AB1P08238 724 aaKnown RBP15.91■□□□□ 0.14
RABGGTA-218ENST00000560777 AKAP4Q5JQC9 854 aa15.91■□□□□ 0.14
RABGGTA-218ENST00000560777 DCAF5Q96JK2 942 aa15.91■□□□□ 0.14
RABGGTA-218ENST00000560777 CAMKK2Q96RR4 588 aa15.91■□□□□ 0.14
RABGGTA-218ENST00000560777 EZH2Q15910 746 aaKnown RBP15.9■□□□□ 0.14
RABGGTA-218ENST00000560777 MPRIPQ6WCQ1 1025 aa15.9■□□□□ 0.14
RABGGTA-218ENST00000560777 ADAMTS8Q9UP79 889 aa15.9■□□□□ 0.14
RABGGTA-218ENST00000560777 NHSQ6T4R5 1651 aa15.89■□□□□ 0.13
RABGGTA-218ENST00000560777 GAS2L2Q8NHY3 880 aa15.89■□□□□ 0.13
RABGGTA-218ENST00000560777 PNNQ9H307 717 aaKnown RBP15.89■□□□□ 0.13
RABGGTA-218ENST00000560777 LGR6Q9HBX8 967 aa15.89■□□□□ 0.13
RABGGTA-218ENST00000560777 ERVV-2B6SEH9 535 aa15.88■□□□□ 0.13
RABGGTA-218ENST00000560777 WDR43Q15061 677 aaKnown RBP eCLIP15.88■□□□□ 0.13
RABGGTA-218ENST00000560777 PROM2Q8N271 834 aa15.88■□□□□ 0.13
RABGGTA-218ENST00000560777 PIGBQ92521 554 aa15.88■□□□□ 0.13
RABGGTA-218ENST00000560777 DOT1LQ8TEK3 1739 aa15.88■□□□□ 0.13
RABGGTA-218ENST00000560777 KDM6AO15550 1401 aaPredicted RBP15.87■□□□□ 0.13
RABGGTA-218ENST00000560777 TOGARAM1Q9Y4F4 1720 aa15.87■□□□□ 0.13
RABGGTA-218ENST00000560777 GNAT3A8MTJ3 354 aa15.86■□□□□ 0.13
RABGGTA-218ENST00000560777 RNMTO43148 476 aaKnown RBP15.86■□□□□ 0.13
RABGGTA-218ENST00000560777 PNISRQ8TF01 805 aaKnown RBP15.86■□□□□ 0.13
RABGGTA-218ENST00000560777 MRS2Q9HD23 443 aa15.86■□□□□ 0.13
RABGGTA-218ENST00000560777 BTAF1O14981 1849 aa15.85■□□□□ 0.13
RABGGTA-218ENST00000560777 NEFMP07197 916 aa15.85■□□□□ 0.13
RABGGTA-218ENST00000560777 DIEXFQ68CQ4 756 aaKnown RBP15.85■□□□□ 0.13
RABGGTA-218ENST00000560777 NFATC2IPQ8NCF5 419 aa15.85■□□□□ 0.13
RABGGTA-218ENST00000560777 IL17REQ8NFR9 667 aa15.85■□□□□ 0.13
RABGGTA-218ENST00000560777 TMOD3Q9NYL9 352 aa15.85■□□□□ 0.13
RABGGTA-218ENST00000560777 ITGB4P16144 1822 aa15.84■□□□□ 0.13
RABGGTA-218ENST00000560777 CABP4P57796 275 aa15.84■□□□□ 0.13
RABGGTA-218ENST00000560777 TXNRD1Q16881 649 aa15.84■□□□□ 0.13
RABGGTA-218ENST00000560777 CCDC146Q8IYE0 955 aa15.84■□□□□ 0.13
RABGGTA-218ENST00000560777 MAP3K5Q99683 1374 aa15.84■□□□□ 0.13
RABGGTA-218ENST00000560777 RUNDC1Q96C34 613 aa15.83■□□□□ 0.12
RABGGTA-218ENST00000560777 ASAP1Q9ULH1 1129 aa15.83■□□□□ 0.12
RABGGTA-218ENST00000560777 NFE2L2Q16236 605 aa15.82■□□□□ 0.12
RABGGTA-218ENST00000560777 SLC52A2Q9HAB3 445 aa15.82■□□□□ 0.12
RABGGTA-218ENST00000560777 ATG3Q9NT62 314 aa15.82■□□□□ 0.12
RABGGTA-218ENST00000560777 MAPK8IP3Q9UPT6 1336 aa15.82■□□□□ 0.12
RABGGTA-218ENST00000560777 HTATSF1O43719 755 aaKnown RBP15.81■□□□□ 0.12
RABGGTA-218ENST00000560777 SMARCC1Q92922 1105 aaPredicted RBP15.81■□□□□ 0.12
RABGGTA-218ENST00000560777 SCN11AQ9UI33 1791 aa15.81■□□□□ 0.12
RABGGTA-218ENST00000560777 TMPOP42166 694 aaKnown RBP15.8■□□□□ 0.12
RABGGTA-218ENST00000560777 DCTN1Q14203 1278 aa15.8■□□□□ 0.12
RABGGTA-218ENST00000560777 MCM10Q7L590 875 aa15.8■□□□□ 0.12
RABGGTA-218ENST00000560777 RTF1Q92541 710 aaKnown RBP15.8■□□□□ 0.12
RABGGTA-218ENST00000560777 LRRC4BQ9NT99 713 aa15.8■□□□□ 0.12
RABGGTA-218ENST00000560777 RGPD3A6NKT7 1758 aaPredicted RBP15.8■□□□□ 0.12
RABGGTA-218ENST00000560777 RGPD4Q7Z3J3 1758 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms