RNA–Protein interactions for RNA: ENST00000560709.1

AC087878.1-201, humanhuman

TSL 4 BASIC

Gene AC087878.1, Length 574 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087878.1-201ENST00000560709 COL16A1Q07092 1604 aaPredicted RBP15.31■□□□□ 0.04
AC087878.1-201ENST00000560709 PHLPP1O60346 1717 aa15.31■□□□□ 0.04
AC087878.1-201ENST00000560709 UBAP1LF5GYI3 381 aa15.3■□□□□ 0.04
AC087878.1-201ENST00000560709 ADRA2BP18089 450 aa15.3■□□□□ 0.04
AC087878.1-201ENST00000560709 RAPGEF4Q8WZA2 1011 aa15.3■□□□□ 0.04
AC087878.1-201ENST00000560709 DLG5Q8TDM6 1919 aa15.29■□□□□ 0.04
AC087878.1-201ENST00000560709 COL5A2P05997 1499 aaPredicted RBP15.29■□□□□ 0.04
AC087878.1-201ENST00000560709 CHRNA2Q15822 529 aa15.29■□□□□ 0.04
AC087878.1-201ENST00000560709 AKAP4Q5JQC9 854 aa15.29■□□□□ 0.04
AC087878.1-201ENST00000560709 NLRP2Q9NX02 1062 aa15.29■□□□□ 0.04
AC087878.1-201ENST00000560709 TATP17735 454 aaPredicted RBP15.28■□□□□ 0.04
AC087878.1-201ENST00000560709 USHBP1Q8N6Y0 703 aa15.28■□□□□ 0.04
AC087878.1-201ENST00000560709 CERKQ8TCT0 537 aa15.28■□□□□ 0.04
AC087878.1-201ENST00000560709 PPP4R2Q9NY27 417 aa15.28■□□□□ 0.04
AC087878.1-201ENST00000560709 COL14A1Q05707 1796 aaKnown RBP15.28■□□□□ 0.04
AC087878.1-201ENST00000560709 LRRC37A3O60309 1634 aa15.28■□□□□ 0.04
AC087878.1-201ENST00000560709 CRB1P82279 1406 aa15.27■□□□□ 0.04
AC087878.1-201ENST00000560709 SOS1Q07889 1333 aaPredicted RBP15.27■□□□□ 0.04
AC087878.1-201ENST00000560709 C1orf141Q5JVX7 400 aa15.27■□□□□ 0.04
AC087878.1-201ENST00000560709 SPG7Q9UQ90 795 aa15.27■□□□□ 0.04
AC087878.1-201ENST00000560709 CHL1O00533 1208 aa15.26■□□□□ 0.03
AC087878.1-201ENST00000560709 RARSP54136 660 aaKnown RBP15.26■□□□□ 0.03
AC087878.1-201ENST00000560709 ALDH1L2Q3SY69 923 aa15.26■□□□□ 0.03
AC087878.1-201ENST00000560709 TSR2Q969E8 191 aaKnown RBP15.26■□□□□ 0.03
AC087878.1-201ENST00000560709 CARD10Q9BWT7 1032 aa15.26■□□□□ 0.03
AC087878.1-201ENST00000560709 CEMIPQ8WUJ3 1361 aa15.25■□□□□ 0.03
AC087878.1-201ENST00000560709 FAM83GA6ND36 823 aa15.25■□□□□ 0.03
AC087878.1-201ENST00000560709 MS4A1P11836 297 aa15.25■□□□□ 0.03
AC087878.1-201ENST00000560709 PIP4K2BP78356 416 aa15.25■□□□□ 0.03
AC087878.1-201ENST00000560709 EXOSC9Q06265 439 aaKnown RBP15.25■□□□□ 0.03
AC087878.1-201ENST00000560709 ZNF530Q6P9A1 599 aaPredicted RBP15.25■□□□□ 0.03
AC087878.1-201ENST00000560709 MCM10Q7L590 875 aa15.25■□□□□ 0.03
AC087878.1-201ENST00000560709 THUMPD2Q9BTF0 503 aaKnown RBP15.25■□□□□ 0.03
AC087878.1-201ENST00000560709 MBIPQ9NS73 344 aa15.25■□□□□ 0.03
AC087878.1-201ENST00000560709 LAS1LQ9Y4W2 734 aaKnown RBP15.25■□□□□ 0.03
AC087878.1-201ENST00000560709 RGPD5Q99666 1765 aa15.25■□□□□ 0.03
AC087878.1-201ENST00000560709 HSP90AB1P08238 724 aaKnown RBP15.24■□□□□ 0.03
AC087878.1-201ENST00000560709 EVA1CP58658 441 aa15.24■□□□□ 0.03
AC087878.1-201ENST00000560709 TOM1L2Q6ZVM7 507 aa15.24■□□□□ 0.03
AC087878.1-201ENST00000560709 CHMP4AQ9BY43 222 aa15.24■□□□□ 0.03
AC087878.1-201ENST00000560709 RGPD2P0DJD1 1756 aa15.24■□□□□ 0.03
AC087878.1-201ENST00000560709 JCADQ9P266 1359 aa15.24■□□□□ 0.03
AC087878.1-201ENST00000560709 KIF16BQ96L93 1317 aa15.23■□□□□ 0.03
AC087878.1-201ENST00000560709 BRPF1P55201 1214 aaPredicted RBP15.23■□□□□ 0.03
AC087878.1-201ENST00000560709 DCTN1Q14203 1278 aa15.23■□□□□ 0.03
AC087878.1-201ENST00000560709 PDE3AQ14432 1141 aa15.23■□□□□ 0.03
AC087878.1-201ENST00000560709 CANXP27824 592 aaKnown RBP15.22■□□□□ 0.03
AC087878.1-201ENST00000560709 PARP4Q9UKK3 1724 aaKnown RBP15.22■□□□□ 0.03
AC087878.1-201ENST00000560709 AAMPQ13685 434 aa15.21■□□□□ 0.03
AC087878.1-201ENST00000560709 TAF7Q15545 349 aaPredicted RBP15.21■□□□□ 0.03
AC087878.1-201ENST00000560709 IFNL2Q8IZJ0 200 aa15.21■□□□□ 0.03
AC087878.1-201ENST00000560709 TSPYL4Q9UJ04 414 aa15.21■□□□□ 0.03
AC087878.1-201ENST00000560709 MEGF6O75095 1541 aa15.21■□□□□ 0.03
AC087878.1-201ENST00000560709 PKD1L3Q7Z443 1732 aa15.2■□□□□ 0.02
AC087878.1-201ENST00000560709 IPO8O15397 1037 aaKnown RBP15.2■□□□□ 0.02
AC087878.1-201ENST00000560709 TWISTNBQ3B726 338 aaPredicted RBP15.2■□□□□ 0.02
AC087878.1-201ENST00000560709 IL17REQ8NFR9 667 aa15.2■□□□□ 0.02
AC087878.1-201ENST00000560709 SMC4Q9NTJ3 1288 aa15.2■□□□□ 0.02
AC087878.1-201ENST00000560709 SPATA31A6Q5VVP1 1343 aa15.19■□□□□ 0.02
AC087878.1-201ENST00000560709 PCDH11XQ9BZA7 1347 aa15.19■□□□□ 0.02
AC087878.1-201ENST00000560709 PCDH11YQ9BZA8 1340 aa15.19■□□□□ 0.02
AC087878.1-201ENST00000560709 ADAMTS7Q9UKP4 1686 aa15.19■□□□□ 0.02
AC087878.1-201ENST00000560709 VAMP4O75379 141 aa15.19■□□□□ 0.02
AC087878.1-201ENST00000560709 BCAR3O75815 825 aa15.19■□□□□ 0.02
AC087878.1-201ENST00000560709 IL2RBP14784 551 aa15.19■□□□□ 0.02
AC087878.1-201ENST00000560709 IRX6P78412 446 aaPredicted RBP15.19■□□□□ 0.02
AC087878.1-201ENST00000560709 TEFQ10587 303 aa15.19■□□□□ 0.02
AC087878.1-201ENST00000560709 RNMTO43148 476 aaKnown RBP15.18■□□□□ 0.02
AC087878.1-201ENST00000560709 ZKSCAN2Q63HK3 967 aa15.18■□□□□ 0.02
AC087878.1-201ENST00000560709 STRN4Q9NRL3 753 aa15.18■□□□□ 0.02
AC087878.1-201ENST00000560709 BTG4Q9NY30 223 aa15.18■□□□□ 0.02
AC087878.1-201ENST00000560709 HOXB7P09629 217 aa15.17■□□□□ 0.02
AC087878.1-201ENST00000560709 PHKG2P15735 406 aa15.17■□□□□ 0.02
AC087878.1-201ENST00000560709 ARHGAP45Q92619 1136 aa15.17■□□□□ 0.02
AC087878.1-201ENST00000560709 DCAF5Q96JK2 942 aa15.17■□□□□ 0.02
AC087878.1-201ENST00000560709 CDCA7Q9BWT1 371 aaPredicted RBP15.17■□□□□ 0.02
AC087878.1-201ENST00000560709 THRAP3Q9Y2W1 955 aaKnown RBP15.17■□□□□ 0.02
AC087878.1-201ENST00000560709 LARP1Q6PKG0 1096 aaKnown RBP15.16■□□□□ 0.02
AC087878.1-201ENST00000560709 SSH1Q8WYL5 1049 aa15.16■□□□□ 0.02
AC087878.1-201ENST00000560709 NWD2Q9ULI1 1742 aa15.16■□□□□ 0.02
AC087878.1-201ENST00000560709 PLCH1Q4KWH8 1693 aa15.16■□□□□ 0.02
AC087878.1-201ENST00000560709 MRC1P22897 1456 aa15.15■□□□□ 0.02
AC087878.1-201ENST00000560709 PLIN1O60240 522 aa15.15■□□□□ 0.02
AC087878.1-201ENST00000560709 ZCRB1Q8TBF4 217 aaKnown RBP15.15■□□□□ 0.02
AC087878.1-201ENST00000560709 C8orf58Q8NAV2 365 aa15.14■□□□□ 0.01
AC087878.1-201ENST00000560709 FRAT1Q92837 279 aaPredicted RBP15.14■□□□□ 0.01
AC087878.1-201ENST00000560709 SLIT2O94813 1529 aa15.13■□□□□ 0.01
AC087878.1-201ENST00000560709 DISP2A7MBM2 1401 aa15.13■□□□□ 0.01
AC087878.1-201ENST00000560709 NKX1-1Q15270 411 aaPredicted RBP15.13■□□□□ 0.01
AC087878.1-201ENST00000560709 ATF7IPQ6VMQ6 1270 aa15.13■□□□□ 0.01
AC087878.1-201ENST00000560709 MPRIPQ6WCQ1 1025 aa15.13■□□□□ 0.01
AC087878.1-201ENST00000560709 FTSJ3Q8IY81 847 aaKnown RBP15.13■□□□□ 0.01
AC087878.1-201ENST00000560709 TSPYL6Q8N831 410 aa15.13■□□□□ 0.01
AC087878.1-201ENST00000560709 CCDC136Q96JN2 1154 aa15.13■□□□□ 0.01
AC087878.1-201ENST00000560709 CHMP4BQ9H444 224 aaKnown RBP15.13■□□□□ 0.01
AC087878.1-201ENST00000560709 BTBD11A6QL63 1104 aa15.12■□□□□ 0.01
AC087878.1-201ENST00000560709 DZIP1LQ8IYY4 767 aaKnown RBP15.12■□□□□ 0.01
AC087878.1-201ENST00000560709 MRPL50Q8N5N7 158 aaKnown RBP15.12■□□□□ 0.01
AC087878.1-201ENST00000560709 CRBNQ96SW2 442 aa15.12■□□□□ 0.01
AC087878.1-201ENST00000560709 BCL2L13Q9BXK5 485 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms