RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 ZNF853P0CG23 659 aa19.53■□□□□ 0.72
PBX1-219ENST00000560641 A0A1W2PP64 1363 aa19.52■□□□□ 0.72
PBX1-219ENST00000560641 BCL2L12Q9HB09 334 aa19.52■□□□□ 0.72
PBX1-219ENST00000560641 PTMAP06454 111 aaKnown RBP19.52■□□□□ 0.72
PBX1-219ENST00000560641 API5Q9BZZ5 524 aaKnown RBP19.52■□□□□ 0.72
PBX1-219ENST00000560641 OSBPL3Q9H4L5 887 aa19.52■□□□□ 0.72
PBX1-219ENST00000560641 CPSF1Q10570 1443 aaKnown RBP19.52■□□□□ 0.71
PBX1-219ENST00000560641 DIAPH3Q9NSV4 1193 aa19.51■□□□□ 0.71
PBX1-219ENST00000560641 IFT57Q9NWB7 429 aa19.51■□□□□ 0.71
PBX1-219ENST00000560641 SSH2Q76I76 1423 aa19.51■□□□□ 0.71
PBX1-219ENST00000560641 DLG5Q8TDM6 1919 aa19.51■□□□□ 0.71
PBX1-219ENST00000560641 EPB41L2O43491 1005 aaKnown RBP19.5■□□□□ 0.71
PBX1-219ENST00000560641 ANAPC15P60006 121 aa19.5■□□□□ 0.71
PBX1-219ENST00000560641 ARHGEF40Q8TER5 1519 aa19.5■□□□□ 0.71
PBX1-219ENST00000560641 ABCC3O15438 1527 aa19.5■□□□□ 0.71
PBX1-219ENST00000560641 ANKRD44Q8N8A2 993 aa19.49■□□□□ 0.71
PBX1-219ENST00000560641 NEXMIFQ5QGS0 1516 aa19.49■□□□□ 0.71
PBX1-219ENST00000560641 SDSP20132 328 aa19.49■□□□□ 0.71
PBX1-219ENST00000560641 ERC2O15083 957 aa19.49■□□□□ 0.71
PBX1-219ENST00000560641 CHD1O14646 1710 aa19.48■□□□□ 0.71
PBX1-219ENST00000560641 KIDINS220Q9ULH0 1771 aa19.48■□□□□ 0.71
PBX1-219ENST00000560641 RGS12O14924 1447 aa19.48■□□□□ 0.71
PBX1-219ENST00000560641 RPAP2Q8IXW5 612 aaPredicted RBP19.48■□□□□ 0.71
PBX1-219ENST00000560641 KIAA1524Q8TCG1 905 aa19.48■□□□□ 0.71
PBX1-219ENST00000560641 TMX3Q96JJ7 454 aa19.48■□□□□ 0.71
PBX1-219ENST00000560641 RPAP1Q9BWH6 1393 aaPredicted RBP19.48■□□□□ 0.71
PBX1-219ENST00000560641 PDCL2Q8N4E4 241 aa19.48■□□□□ 0.71
PBX1-219ENST00000560641 HECW2Q9P2P5 1572 aa19.48■□□□□ 0.71
PBX1-219ENST00000560641 GABPB1Q06547 395 aaPredicted RBP19.47■□□□□ 0.71
PBX1-219ENST00000560641 USP25Q9UHP3 1055 aa19.47■□□□□ 0.71
PBX1-219ENST00000560641 CBX1P83916 185 aa19.47■□□□□ 0.71
PBX1-219ENST00000560641 FBLN2P98095 1184 aa19.47■□□□□ 0.71
PBX1-219ENST00000560641 DIAPH1O60610 1272 aaKnown RBP19.47■□□□□ 0.71
PBX1-219ENST00000560641 CCDC183Q5T5S1 534 aa19.47■□□□□ 0.71
PBX1-219ENST00000560641 C1orf115Q9H7X2 142 aa19.47■□□□□ 0.71
PBX1-219ENST00000560641 TRAK1Q9UPV9 953 aa19.47■□□□□ 0.71
PBX1-219ENST00000560641 GNAI1P63096 354 aa19.46■□□□□ 0.71
PBX1-219ENST00000560641 DNTTIP2Q5QJE6 756 aaKnown RBP19.46■□□□□ 0.71
PBX1-219ENST00000560641 RNF214Q8ND24 703 aa19.46■□□□□ 0.71
PBX1-219ENST00000560641 OGFRQ9NZT2 677 aa19.46■□□□□ 0.71
PBX1-219ENST00000560641 A0A0U1RQG5 324 aaPredicted RBP19.46■□□□□ 0.7
PBX1-219ENST00000560641 U2SURPO15042 1029 aaKnown RBP19.45■□□□□ 0.7
PBX1-219ENST00000560641 FUCA2Q9BTY2 467 aa19.45■□□□□ 0.7
PBX1-219ENST00000560641 KDM4AO75164 1064 aa19.45■□□□□ 0.7
PBX1-219ENST00000560641 ADCY5O95622 1261 aa19.44■□□□□ 0.7
PBX1-219ENST00000560641 CDK12Q9NYV4 1490 aaPredicted RBP19.44■□□□□ 0.7
PBX1-219ENST00000560641 NFE2L2Q16236 605 aa19.44■□□□□ 0.7
PBX1-219ENST00000560641 FAM193AP78312 1265 aa19.43■□□□□ 0.7
PBX1-219ENST00000560641 MX1P20591 662 aa19.43■□□□□ 0.7
PBX1-219ENST00000560641 WDR33Q9C0J8 1336 aaKnown RBP19.42■□□□□ 0.7
PBX1-219ENST00000560641 GTF2E1P29083 439 aaPredicted RBP19.42■□□□□ 0.7
PBX1-219ENST00000560641 N4BP2Q86UW6 1770 aaPredicted RBP19.42■□□□□ 0.7
PBX1-219ENST00000560641 TCHHQ07283 1943 aa19.41■□□□□ 0.7
PBX1-219ENST00000560641 FYB1O15117 783 aa19.41■□□□□ 0.7
PBX1-219ENST00000560641 JARID2Q92833 1246 aaPredicted RBP19.41■□□□□ 0.7
PBX1-219ENST00000560641 CHAF1AQ13111 956 aaPredicted RBP19.41■□□□□ 0.7
PBX1-219ENST00000560641 KIAA0232Q92628 1395 aa19.41■□□□□ 0.7
PBX1-219ENST00000560641 NPATQ14207 1427 aa19.41■□□□□ 0.7
PBX1-219ENST00000560641 PTPRMP28827 1452 aa19.4■□□□□ 0.7
PBX1-219ENST00000560641 CEP85Q6P2H3 762 aa19.4■□□□□ 0.7
PBX1-219ENST00000560641 AFAP1Q8N556 730 aa19.4■□□□□ 0.7
PBX1-219ENST00000560641 TSC1Q92574 1164 aa19.4■□□□□ 0.7
PBX1-219ENST00000560641 RIOK3O14730 519 aaKnown RBP19.39■□□□□ 0.69
PBX1-219ENST00000560641 USP48Q86UV5 1035 aa19.39■□□□□ 0.69
PBX1-219ENST00000560641 TTC12Q9H892 705 aaPredicted RBP19.39■□□□□ 0.69
PBX1-219ENST00000560641 SALL3Q9BXA9 1300 aa19.39■□□□□ 0.69
PBX1-219ENST00000560641 KCNF1Q9H3M0 494 aa19.39■□□□□ 0.69
PBX1-219ENST00000560641 PREX1Q8TCU6 1659 aa19.39■□□□□ 0.69
PBX1-219ENST00000560641 ERCC6L2Q5T890 1561 aa19.39■□□□□ 0.69
PBX1-219ENST00000560641 TSPYL6Q8N831 410 aa19.38■□□□□ 0.69
PBX1-219ENST00000560641 ARID3AQ99856 593 aa19.38■□□□□ 0.69
PBX1-219ENST00000560641 MAP2P11137 1827 aaKnown RBP19.38■□□□□ 0.69
PBX1-219ENST00000560641 CHAMP1Q96JM3 812 aa19.38■□□□□ 0.69
PBX1-219ENST00000560641 TMEM51Q9NW97 253 aa19.38■□□□□ 0.69
PBX1-219ENST00000560641 KIF3BO15066 747 aa19.38■□□□□ 0.69
PBX1-219ENST00000560641 SLC20A2Q08357 652 aa19.38■□□□□ 0.69
PBX1-219ENST00000560641 C16orf71Q8IYS4 520 aaPredicted RBP19.38■□□□□ 0.69
PBX1-219ENST00000560641 GADD45BO75293 160 aaPredicted RBP19.37■□□□□ 0.69
PBX1-219ENST00000560641 UBE2HP62256 183 aa19.37■□□□□ 0.69
PBX1-219ENST00000560641 MBIPQ9NS73 344 aa19.37■□□□□ 0.69
PBX1-219ENST00000560641 NEK4P51957 841 aa19.37■□□□□ 0.69
PBX1-219ENST00000560641 CTNNA3Q9UI47 895 aa19.37■□□□□ 0.69
PBX1-219ENST00000560641 SIGLEC1Q9BZZ2 1709 aa19.37■□□□□ 0.69
PBX1-219ENST00000560641 TWISTNBQ3B726 338 aaPredicted RBP19.36■□□□□ 0.69
PBX1-219ENST00000560641 MORC2Q9Y6X9 1032 aaPredicted RBP19.36■□□□□ 0.69
PBX1-219ENST00000560641 CREBRFQ8IUR6 639 aa19.36■□□□□ 0.69
PBX1-219ENST00000560641 ZNF830Q96NB3 372 aaPredicted RBP19.36■□□□□ 0.69
PBX1-219ENST00000560641 FAM53CQ9NYF3 392 aa19.36■□□□□ 0.69
PBX1-219ENST00000560641 MCCP23508 829 aa19.36■□□□□ 0.69
PBX1-219ENST00000560641 TERF2IPQ9NYB0 399 aa19.36■□□□□ 0.69
PBX1-219ENST00000560641 DDX41Q9UJV9 622 aaKnown RBP19.36■□□□□ 0.69
PBX1-219ENST00000560641 RIMS2Q9UQ26 1411 aa19.36■□□□□ 0.69
PBX1-219ENST00000560641 LMOD3Q0VAK6 560 aa19.35■□□□□ 0.69
PBX1-219ENST00000560641 NRKQ7Z2Y5 1582 aa19.35■□□□□ 0.69
PBX1-219ENST00000560641 GOLGA6L6A8MZA4 724 aa19.35■□□□□ 0.69
PBX1-219ENST00000560641 NCBP1Q09161 790 aaKnown RBP19.35■□□□□ 0.69
PBX1-219ENST00000560641 OTUD7AQ8TE49 926 aaPredicted RBP19.35■□□□□ 0.69
PBX1-219ENST00000560641 ESYT1Q9BSJ8 1104 aa19.35■□□□□ 0.69
PBX1-219ENST00000560641 ITSN1Q15811 1721 aa19.34■□□□□ 0.69
PBX1-219ENST00000560641 HAP1P54257 671 aaPredicted RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms