RNA–Protein interactions for RNA: ENST00000560542.1

IRF9-210, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-210ENST00000560542 PRIM1P49642 420 aaKnown RBP20.23■□□□□ 0.83
IRF9-210ENST00000560542 TMC1Q8TDI8 760 aa20.23■□□□□ 0.83
IRF9-210ENST00000560542 SYTL4Q96C24 671 aaPredicted RBP20.23■□□□□ 0.83
IRF9-210ENST00000560542 A0A1W2PP64 1363 aa20.22■□□□□ 0.83
IRF9-210ENST00000560542 YBX3P16989 372 aaKnown RBP eCLIP20.21■□□□□ 0.83
IRF9-210ENST00000560542 CCNL1Q9UK58 526 aaPredicted RBP20.21■□□□□ 0.83
IRF9-210ENST00000560542 CEP350Q5VT06 3117 aa20.21■□□□□ 0.83
IRF9-210ENST00000560542 ZCRB1Q8TBF4 217 aaKnown RBP20.2■□□□□ 0.82
IRF9-210ENST00000560542 SLC12A5Q9H2X9 1139 aa20.2■□□□□ 0.82
IRF9-210ENST00000560542 USP47Q96K76 1375 aa20.2■□□□□ 0.82
IRF9-210ENST00000560542 KCNQ4P56696 695 aa20.19■□□□□ 0.82
IRF9-210ENST00000560542 CGNL1Q0VF96 1302 aa20.19■□□□□ 0.82
IRF9-210ENST00000560542 ATP10DQ9P241 1426 aa20.19■□□□□ 0.82
IRF9-210ENST00000560542 CD2APQ9Y5K6 639 aa20.18■□□□□ 0.82
IRF9-210ENST00000560542 COL23A1Q86Y22 540 aaPredicted RBP20.17■□□□□ 0.82
IRF9-210ENST00000560542 FLAD1Q8NFF5 587 aa20.17■□□□□ 0.82
IRF9-210ENST00000560542 LTV1Q96GA3 475 aaPredicted RBP20.17■□□□□ 0.82
IRF9-210ENST00000560542 RTL1A6NKG5 1358 aa20.17■□□□□ 0.82
IRF9-210ENST00000560542 MEGF6O75095 1541 aa20.17■□□□□ 0.82
IRF9-210ENST00000560542 HOXC9P31274 260 aa20.16■□□□□ 0.82
IRF9-210ENST00000560542 SIN3AQ96ST3 1273 aa20.16■□□□□ 0.82
IRF9-210ENST00000560542 CARD11Q9BXL7 1154 aa20.16■□□□□ 0.82
IRF9-210ENST00000560542 MAP3K19Q56UN5 1328 aa20.16■□□□□ 0.82
IRF9-210ENST00000560542 MSH5O43196 834 aa20.15■□□□□ 0.82
IRF9-210ENST00000560542 COG3Q96JB2 828 aa20.15■□□□□ 0.82
IRF9-210ENST00000560542 ADCY9O60503 1353 aa20.15■□□□□ 0.82
IRF9-210ENST00000560542 C5P01031 1676 aa20.15■□□□□ 0.82
IRF9-210ENST00000560542 AMPHP49418 695 aa20.14■□□□□ 0.81
IRF9-210ENST00000560542 GPBP1L1Q9HC44 474 aaPredicted RBP20.14■□□□□ 0.81
IRF9-210ENST00000560542 NEUROD1Q13562 356 aa20.12■□□□□ 0.81
IRF9-210ENST00000560542 HSPA6P17066 643 aa20.11■□□□□ 0.81
IRF9-210ENST00000560542 SMG6Q86US8 1419 aaKnown RBP20.1■□□□□ 0.81
IRF9-210ENST00000560542 SLC24A1O60721 1099 aa20.1■□□□□ 0.81
IRF9-210ENST00000560542 MSL1Q68DK7 614 aa20.1■□□□□ 0.81
IRF9-210ENST00000560542 RGPD2P0DJD1 1756 aa20.1■□□□□ 0.81
IRF9-210ENST00000560542 NSD3Q9BZ95 1437 aa20.1■□□□□ 0.81
IRF9-210ENST00000560542 PCDH11XQ9BZA7 1347 aa20.09■□□□□ 0.81
IRF9-210ENST00000560542 PCDH11YQ9BZA8 1340 aa20.09■□□□□ 0.81
IRF9-210ENST00000560542 RAPGEF4Q8WZA2 1011 aa20.09■□□□□ 0.81
IRF9-210ENST00000560542 PALLDQ8WX93 1383 aa20.08■□□□□ 0.81
IRF9-210ENST00000560542 TAF1LQ8IZX4 1826 aa20.08■□□□□ 0.8
IRF9-210ENST00000560542 NBPF6Q5VWK0 638 aa20.06■□□□□ 0.8
IRF9-210ENST00000560542 NBPF4Q96M43 638 aa20.06■□□□□ 0.8
IRF9-210ENST00000560542 C4BP0C0L5 1744 aa20.05■□□□□ 0.8
IRF9-210ENST00000560542 TATP17735 454 aaPredicted RBP20.05■□□□□ 0.8
IRF9-210ENST00000560542 SMARCC1Q92922 1105 aaPredicted RBP20.05■□□□□ 0.8
IRF9-210ENST00000560542 KIF24Q5T7B8 1368 aa20.05■□□□□ 0.8
IRF9-210ENST00000560542 AK7Q96M32 723 aa20.03■□□□□ 0.8
IRF9-210ENST00000560542 TESK2Q96S53 571 aa20.02■□□□□ 0.8
IRF9-210ENST00000560542 INSRP06213 1382 aa20.02■□□□□ 0.8
IRF9-210ENST00000560542 TOGARAM1Q9Y4F4 1720 aa20.02■□□□□ 0.79
IRF9-210ENST00000560542 IGSF1Q8N6C5 1336 aa20.02■□□□□ 0.79
IRF9-210ENST00000560542 FBLN1P23142 703 aa20.01■□□□□ 0.79
IRF9-210ENST00000560542 CICQ96RK0 1608 aaPredicted RBP20.01■□□□□ 0.79
IRF9-210ENST00000560542 UBR3Q6ZT12 1888 aa20.01■□□□□ 0.79
IRF9-210ENST00000560542 SSFA2P28290 1259 aa20■□□□□ 0.79
IRF9-210ENST00000560542 RRS1Q15050 365 aaKnown RBP20■□□□□ 0.79
IRF9-210ENST00000560542 MPRIPQ6WCQ1 1025 aa20■□□□□ 0.79
IRF9-210ENST00000560542 FLT4P35916 1363 aa19.99■□□□□ 0.79
IRF9-210ENST00000560542 USHBP1Q8N6Y0 703 aa19.99■□□□□ 0.79
IRF9-210ENST00000560542 ZNF526Q8TF50 670 aaPredicted RBP19.99■□□□□ 0.79
IRF9-210ENST00000560542 FYB1O15117 783 aa19.98■□□□□ 0.79
IRF9-210ENST00000560542 PKD1L3Q7Z443 1732 aa19.98■□□□□ 0.79
IRF9-210ENST00000560542 ITGB4P16144 1822 aa19.97■□□□□ 0.79
IRF9-210ENST00000560542 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.97■□□□□ 0.79
IRF9-210ENST00000560542 CYP27B1O15528 508 aa19.97■□□□□ 0.79
IRF9-210ENST00000560542 TONSLQ96HA7 1378 aa19.96■□□□□ 0.79
IRF9-210ENST00000560542 KIF3CO14782 793 aa19.96■□□□□ 0.79
IRF9-210ENST00000560542 NCAPD2Q15021 1401 aa19.95■□□□□ 0.78
IRF9-210ENST00000560542 ST20-MTHFSA0A0A6YYL1 179 aa19.95■□□□□ 0.78
IRF9-210ENST00000560542 APLP1P51693 650 aa19.95■□□□□ 0.78
IRF9-210ENST00000560542 NKX1-1Q15270 411 aaPredicted RBP19.95■□□□□ 0.78
IRF9-210ENST00000560542 HSP90AB2PQ58FF8 381 aa19.95■□□□□ 0.78
IRF9-210ENST00000560542 AMIGO3Q86WK7 504 aa19.95■□□□□ 0.78
IRF9-210ENST00000560542 MAP2P11137 1827 aaKnown RBP19.95■□□□□ 0.78
IRF9-210ENST00000560542 PHF14O94880 888 aa19.94■□□□□ 0.78
IRF9-210ENST00000560542 GGNBP2Q9H3C7 697 aa19.94■□□□□ 0.78
IRF9-210ENST00000560542 LOC102724428A0A0B4J2F2 783 aa19.93■□□□□ 0.78
IRF9-210ENST00000560542 SIK1P57059 783 aa19.93■□□□□ 0.78
IRF9-210ENST00000560542 PIGBQ92521 554 aa19.93■□□□□ 0.78
IRF9-210ENST00000560542 KIF20BQ96Q89 1820 aa19.92■□□□□ 0.78
IRF9-210ENST00000560542 KIF13BQ9NQT8 1826 aa19.91■□□□□ 0.78
IRF9-210ENST00000560542 SPG7Q9UQ90 795 aa19.91■□□□□ 0.78
IRF9-210ENST00000560542 TOMM70O94826 608 aa19.9■□□□□ 0.78
IRF9-210ENST00000560542 LINC00116Q8NCU8 138 aa19.9■□□□□ 0.78
IRF9-210ENST00000560542 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.9■□□□□ 0.78
IRF9-210ENST00000560542 PXDNLA1KZ92 1463 aa19.9■□□□□ 0.78
IRF9-210ENST00000560542 TGFB2P61812 414 aa19.89■□□□□ 0.77
IRF9-210ENST00000560542 TMF1P82094 1093 aa19.89■□□□□ 0.77
IRF9-210ENST00000560542 PLEKHG2Q9H7P9 1386 aa19.89■□□□□ 0.77
IRF9-210ENST00000560542 GNPATO15228 680 aa19.88■□□□□ 0.77
IRF9-210ENST00000560542 TMOD3Q9NYL9 352 aa19.88■□□□□ 0.77
IRF9-210ENST00000560542 MMP10P09238 476 aa19.87■□□□□ 0.77
IRF9-210ENST00000560542 WWC3Q9ULE0 1092 aa19.87■□□□□ 0.77
IRF9-210ENST00000560542 ANKRD26Q9UPS8 1709 aa19.87■□□□□ 0.77
IRF9-210ENST00000560542 KIAA1551Q9HCM1 1747 aa19.86■□□□□ 0.77
IRF9-210ENST00000560542 CDCA8Q53HL2 280 aa19.86■□□□□ 0.77
IRF9-210ENST00000560542 C10orf71Q711Q0 1435 aa19.85■□□□□ 0.77
IRF9-210ENST00000560542 ZNF831Q5JPB2 1677 aa19.85■□□□□ 0.77
IRF9-210ENST00000560542 ATP6V1AP38606 617 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms