RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 TRMT44Q8IYL2 757 aaKnown RBP10.54□□□□□ -0.72
ZEB1-216ENST00000559496 RAPGEF6Q8TEU7 1601 aa10.54□□□□□ -0.72
ZEB1-216ENST00000559496 ERCC6L2Q5T890 1561 aa10.54□□□□□ -0.72
ZEB1-216ENST00000559496 MAGEB6P1A0A0J9YX57 407 aa10.53□□□□□ -0.72
ZEB1-216ENST00000559496 KANK4Q5T7N3 995 aaPredicted RBP10.53□□□□□ -0.72
ZEB1-216ENST00000559496 CCDC18Q5T9S5 1454 aa10.53□□□□□ -0.72
ZEB1-216ENST00000559496 PTPRGP23470 1445 aa10.53□□□□□ -0.72
ZEB1-216ENST00000559496 LRRIQ1Q96JM4 1722 aa10.53□□□□□ -0.72
ZEB1-216ENST00000559496 PNMA1Q8ND90 353 aa10.52□□□□□ -0.72
ZEB1-216ENST00000559496 ARHGAP9Q9BRR9 750 aa10.52□□□□□ -0.72
ZEB1-216ENST00000559496 MAP4K5Q9Y4K4 846 aa10.52□□□□□ -0.72
ZEB1-216ENST00000559496 PLB1Q6P1J6 1458 aa10.52□□□□□ -0.72
ZEB1-216ENST00000559496 LRRC9Q6ZRR7 1453 aa10.52□□□□□ -0.73
ZEB1-216ENST00000559496 NFX1Q12986 1120 aaKnown RBP10.52□□□□□ -0.73
ZEB1-216ENST00000559496 PCGF6Q9BYE7 350 aa10.52□□□□□ -0.73
ZEB1-216ENST00000559496 HMX1Q9NP08 348 aaPredicted RBP10.52□□□□□ -0.73
ZEB1-216ENST00000559496 EPRSP07814 1512 aaKnown RBP10.51□□□□□ -0.73
ZEB1-216ENST00000559496 ABCA8O94911 1581 aa10.51□□□□□ -0.73
ZEB1-216ENST00000559496 NUP153P49790 1475 aaKnown RBP10.51□□□□□ -0.73
ZEB1-216ENST00000559496 NR3C2P08235 984 aa10.51□□□□□ -0.73
ZEB1-216ENST00000559496 WDR4P57081 412 aaKnown RBP10.51□□□□□ -0.73
ZEB1-216ENST00000559496 PTK2Q05397 1052 aa10.51□□□□□ -0.73
ZEB1-216ENST00000559496 VASH1Q7L8A9 365 aaPredicted RBP10.51□□□□□ -0.73
ZEB1-216ENST00000559496 EPS8L1Q8TE68 723 aa10.51□□□□□ -0.73
ZEB1-216ENST00000559496 CARD14Q9BXL6 1004 aa10.51□□□□□ -0.73
ZEB1-216ENST00000559496 GPSM3Q9Y4H4 160 aa10.51□□□□□ -0.73
ZEB1-216ENST00000559496 PRKCSHP14314 528 aaPredicted RBP10.5□□□□□ -0.73
ZEB1-216ENST00000559496 ERFEQ4G0M1 354 aa10.5□□□□□ -0.73
ZEB1-216ENST00000559496 CDK13Q14004 1512 aaKnown RBP10.49□□□□□ -0.73
ZEB1-216ENST00000559496 ARID3CA6NKF2 412 aa10.49□□□□□ -0.73
ZEB1-216ENST00000559496 ZBTB33Q86T24 672 aa10.49□□□□□ -0.73
ZEB1-216ENST00000559496 MTUS2Q5JR59 1369 aa10.48□□□□□ -0.73
ZEB1-216ENST00000559496 WFS1O76024 890 aa10.48□□□□□ -0.73
ZEB1-216ENST00000559496 MRPL14Q6P1L8 145 aaKnown RBP10.48□□□□□ -0.73
ZEB1-216ENST00000559496 EHBP1L1Q8N3D4 1523 aa10.47□□□□□ -0.73
ZEB1-216ENST00000559496 UACAQ9BZF9 1416 aa10.47□□□□□ -0.73
ZEB1-216ENST00000559496 ZIC2O95409 532 aaPredicted RBP10.47□□□□□ -0.73
ZEB1-216ENST00000559496 ZFP42Q96MM3 310 aa10.47□□□□□ -0.73
ZEB1-216ENST00000559496 CDV3Q9UKY7 258 aaKnown RBP10.47□□□□□ -0.73
ZEB1-216ENST00000559496 ITPKCQ96DU7 683 aa10.46□□□□□ -0.74
ZEB1-216ENST00000559496 OCSTAMPQ9BR26 566 aa10.46□□□□□ -0.74
ZEB1-216ENST00000559496 ZFAND3Q9H8U3 227 aa10.46□□□□□ -0.74
ZEB1-216ENST00000559496 TERTO14746 1132 aaKnown RBP10.45□□□□□ -0.74
ZEB1-216ENST00000559496 FSHRP23945 695 aa10.45□□□□□ -0.74
ZEB1-216ENST00000559496 LCE2CQ5TA81 110 aa10.45□□□□□ -0.74
ZEB1-216ENST00000559496 TRIM34Q9BYJ4 488 aa10.45□□□□□ -0.74
ZEB1-216ENST00000559496 MAGI3Q5TCQ9 1506 aa10.44□□□□□ -0.74
ZEB1-216ENST00000559496 ABCC2Q92887 1545 aa10.44□□□□□ -0.74
ZEB1-216ENST00000559496 BANK1Q8NDB2 785 aa10.44□□□□□ -0.74
ZEB1-216ENST00000559496 SLC10A4Q96EP9 437 aa10.44□□□□□ -0.74
ZEB1-216ENST00000559496 SCARF1Q14162 830 aa10.43□□□□□ -0.74
ZEB1-216ENST00000559496 CCDC116Q8IYX3 515 aa10.43□□□□□ -0.74
ZEB1-216ENST00000559496 CDK11AQ9UQ88 783 aaPredicted RBP10.43□□□□□ -0.74
ZEB1-216ENST00000559496 EMILIN1Q9Y6C2 1016 aa10.43□□□□□ -0.74
ZEB1-216ENST00000559496 SUPT6HQ7KZ85 1726 aaKnown RBP10.43□□□□□ -0.74
ZEB1-216ENST00000559496 ATP10BO94823 1461 aa10.43□□□□□ -0.74
ZEB1-216ENST00000559496 ADAM32Q8TC27 787 aa10.42□□□□□ -0.74
ZEB1-216ENST00000559496 GJD4Q96KN9 370 aaPredicted RBP10.42□□□□□ -0.74
ZEB1-216ENST00000559496 PURBQ96QR8 312 aaKnown RBP10.42□□□□□ -0.74
ZEB1-216ENST00000559496 KCTD15Q96SI1 283 aaPredicted RBP10.42□□□□□ -0.74
ZEB1-216ENST00000559496 UHRF1BP1LA0JNW5 1464 aa10.42□□□□□ -0.74
ZEB1-216ENST00000559496 MEIOBQ8N635 442 aa10.41□□□□□ -0.74
ZEB1-216ENST00000559496 PHLDB1Q86UU1 1377 aa10.41□□□□□ -0.74
ZEB1-216ENST00000559496 NCOA2Q15596 1464 aa10.41□□□□□ -0.74
ZEB1-216ENST00000559496 WIPF1O43516 503 aa10.4□□□□□ -0.74
ZEB1-216ENST00000559496 TROQ12816 1431 aaPredicted RBP10.4□□□□□ -0.74
ZEB1-216ENST00000559496 BCL11AQ9H165 835 aa10.4□□□□□ -0.74
ZEB1-216ENST00000559496 ARHGEF11O15085 1522 aa10.4□□□□□ -0.75
ZEB1-216ENST00000559496 RRBP1Q9P2E9 1410 aaKnown RBP10.4□□□□□ -0.75
ZEB1-216ENST00000559496 NPAS3Q8IXF0 933 aa10.39□□□□□ -0.75
ZEB1-216ENST00000559496 NXF1Q9UBU9 619 aaKnown RBP10.39□□□□□ -0.75
ZEB1-216ENST00000559496 CCNB3Q8WWL7 1395 aa10.39□□□□□ -0.75
ZEB1-216ENST00000559496 PLEKHD1A6NEE1 506 aa10.39□□□□□ -0.75
ZEB1-216ENST00000559496 SOCS7O14512 581 aa10.39□□□□□ -0.75
ZEB1-216ENST00000559496 DHX9Q08211 1270 aaKnown RBP10.39□□□□□ -0.75
ZEB1-216ENST00000559496 PPP1R26Q5T8A7 1209 aaPredicted RBP10.39□□□□□ -0.75
ZEB1-216ENST00000559496 PGPEP1Q9NXJ5 209 aa10.39□□□□□ -0.75
ZEB1-216ENST00000559496 ADCY10Q96PN6 1610 aa10.38□□□□□ -0.75
ZEB1-216ENST00000559496 DZIP3Q86Y13 1208 aaKnown RBP10.38□□□□□ -0.75
ZEB1-216ENST00000559496 ZCCHC11Q5TAX3 1644 aaKnown RBP10.37□□□□□ -0.75
ZEB1-216ENST00000559496 UPP2O95045 317 aa10.37□□□□□ -0.75
ZEB1-216ENST00000559496 NBPF20Q3BBV1 942 aa10.37□□□□□ -0.75
ZEB1-216ENST00000559496 LINC00528Q8N1L1 170 aa10.37□□□□□ -0.75
ZEB1-216ENST00000559496 KDM5BQ9UGL1 1544 aa10.37□□□□□ -0.75
ZEB1-216ENST00000559496 MYOM3Q5VTT5 1437 aa10.36□□□□□ -0.75
ZEB1-216ENST00000559496 ZBBXA8MT70 800 aa10.36□□□□□ -0.75
ZEB1-216ENST00000559496 FGD6Q6ZV73 1430 aa10.35□□□□□ -0.75
ZEB1-216ENST00000559496 RIMBP3CA6NJZ7 1639 aa10.35□□□□□ -0.75
ZEB1-216ENST00000559496 RIMBP3BA6NNM3 1639 aa10.35□□□□□ -0.75
ZEB1-216ENST00000559496 KIF14Q15058 1648 aa10.35□□□□□ -0.75
ZEB1-216ENST00000559496 RIMBP3Q9UFD9 1639 aa10.35□□□□□ -0.75
ZEB1-216ENST00000559496 CENPBP07199 599 aaPredicted RBP10.35□□□□□ -0.75
ZEB1-216ENST00000559496 INTS6LQ5JSJ4 861 aaKnown RBP10.35□□□□□ -0.75
ZEB1-216ENST00000559496 APBB1O00213 710 aa10.34□□□□□ -0.75
ZEB1-216ENST00000559496 BMP2P12643 396 aa10.34□□□□□ -0.75
ZEB1-216ENST00000559496 C6orf118Q5T5N4 469 aa10.34□□□□□ -0.75
ZEB1-216ENST00000559496 TSEN34Q9BSV6 310 aaKnown RBP10.34□□□□□ -0.75
ZEB1-216ENST00000559496 H3BM21 787 aa10.33□□□□□ -0.76
ZEB1-216ENST00000559496 FAM50AQ14320 339 aaKnown RBP10.33□□□□□ -0.76
ZEB1-216ENST00000559496 Q6ZVU0 165 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms