RNA–Protein interactions for RNA: ENST00000558806.5

AP3S2-206, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 1 (best)

Gene AP3S2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-206ENST00000558806 CGNL1Q0VF96 1302 aa14.97□□□□□ -0.01
AP3S2-206ENST00000558806 PRIM1P49642 420 aaKnown RBP14.97□□□□□ -0.01
AP3S2-206ENST00000558806 RRS1Q15050 365 aaKnown RBP14.97□□□□□ -0.01
AP3S2-206ENST00000558806 CDCA8Q53HL2 280 aa14.97□□□□□ -0.01
AP3S2-206ENST00000558806 KAT6BQ8WYB5 2073 aa14.97□□□□□ -0.01
AP3S2-206ENST00000558806 QSER1Q2KHR3 1735 aa14.97□□□□□ -0.01
AP3S2-206ENST00000558806 DOT1LQ8TEK3 1739 aa14.97□□□□□ -0.01
AP3S2-206ENST00000558806 GGNBP2Q9H3C7 697 aa14.96□□□□□ -0.01
AP3S2-206ENST00000558806 NSD2O96028 1365 aa14.96□□□□□ -0.02
AP3S2-206ENST00000558806 SHANK3Q9BYB0 1731 aa14.95□□□□□ -0.02
AP3S2-206ENST00000558806 NBPF6Q5VWK0 638 aa14.95□□□□□ -0.02
AP3S2-206ENST00000558806 RAPGEF4Q8WZA2 1011 aa14.95□□□□□ -0.02
AP3S2-206ENST00000558806 NBPF4Q96M43 638 aa14.95□□□□□ -0.02
AP3S2-206ENST00000558806 TFCP2L1Q9NZI6 479 aa14.95□□□□□ -0.02
AP3S2-206ENST00000558806 RGPD2P0DJD1 1756 aa14.95□□□□□ -0.02
AP3S2-206ENST00000558806 KIF24Q5T7B8 1368 aa14.95□□□□□ -0.02
AP3S2-206ENST00000558806 PNPLA7Q6ZV29 1317 aa14.94□□□□□ -0.02
AP3S2-206ENST00000558806 POLD1P28340 1107 aa14.94□□□□□ -0.02
AP3S2-206ENST00000558806 TRIM26Q12899 539 aaPredicted RBP14.94□□□□□ -0.02
AP3S2-206ENST00000558806 LY75O60449 1722 aa14.94□□□□□ -0.02
AP3S2-206ENST00000558806 CCNL1Q9UK58 526 aaPredicted RBP14.93□□□□□ -0.02
AP3S2-206ENST00000558806 INSRP06213 1382 aa14.93□□□□□ -0.02
AP3S2-206ENST00000558806 FLT4P35916 1363 aa14.93□□□□□ -0.02
AP3S2-206ENST00000558806 KIF20BQ96Q89 1820 aa14.92□□□□□ -0.02
AP3S2-206ENST00000558806 TATP17735 454 aaPredicted RBP14.92□□□□□ -0.02
AP3S2-206ENST00000558806 USHBP1Q8N6Y0 703 aa14.92□□□□□ -0.02
AP3S2-206ENST00000558806 HMGB2P26583 209 aaKnown RBP14.91□□□□□ -0.02
AP3S2-206ENST00000558806 KCNQ4P56696 695 aa14.91□□□□□ -0.02
AP3S2-206ENST00000558806 ZNF784Q8NCA9 323 aaPredicted RBP14.91□□□□□ -0.02
AP3S2-206ENST00000558806 COL24A1Q17RW2 1714 aa14.91□□□□□ -0.02
AP3S2-206ENST00000558806 PCDH11XQ9BZA7 1347 aa14.91□□□□□ -0.02
AP3S2-206ENST00000558806 PCDH11YQ9BZA8 1340 aa14.91□□□□□ -0.02
AP3S2-206ENST00000558806 HSP90AB2PQ58FF8 381 aa14.9□□□□□ -0.02
AP3S2-206ENST00000558806 TUBGCP6Q96RT7 1819 aa14.89□□□□□ -0.03
AP3S2-206ENST00000558806 GPR162Q16538 588 aa14.89□□□□□ -0.03
AP3S2-206ENST00000558806 KLHL34Q8N239 644 aa14.88□□□□□ -0.03
AP3S2-206ENST00000558806 TIMELESSQ9UNS1 1208 aa14.88□□□□□ -0.03
AP3S2-206ENST00000558806 NSD3Q9BZ95 1437 aa14.88□□□□□ -0.03
AP3S2-206ENST00000558806 CHD4Q14839 1912 aa14.88□□□□□ -0.03
AP3S2-206ENST00000558806 CARD14Q9BXL6 1004 aa14.87□□□□□ -0.03
AP3S2-206ENST00000558806 MSH5O43196 834 aa14.86□□□□□ -0.03
AP3S2-206ENST00000558806 PALLDQ8WX93 1383 aa14.85□□□□□ -0.03
AP3S2-206ENST00000558806 C5P01031 1676 aa14.85□□□□□ -0.03
AP3S2-206ENST00000558806 CYP27B1O15528 508 aa14.85□□□□□ -0.03
AP3S2-206ENST00000558806 MPRIPQ6WCQ1 1025 aa14.85□□□□□ -0.03
AP3S2-206ENST00000558806 COL23A1Q86Y22 540 aaPredicted RBP14.85□□□□□ -0.03
AP3S2-206ENST00000558806 EMILIN1Q9Y6C2 1016 aa14.85□□□□□ -0.03
AP3S2-206ENST00000558806 NCAPD2Q15021 1401 aa14.84□□□□□ -0.03
AP3S2-206ENST00000558806 FLAD1Q8NFF5 587 aa14.84□□□□□ -0.03
AP3S2-206ENST00000558806 PKD1L3Q7Z443 1732 aa14.83□□□□□ -0.03
AP3S2-206ENST00000558806 PPM1GO15355 546 aaPredicted RBP14.83□□□□□ -0.04
AP3S2-206ENST00000558806 PELP1Q8IZL8 1130 aaKnown RBP14.83□□□□□ -0.04
AP3S2-206ENST00000558806 SMARCC1Q92922 1105 aaPredicted RBP14.83□□□□□ -0.04
AP3S2-206ENST00000558806 SPG7Q9UQ90 795 aa14.83□□□□□ -0.04
AP3S2-206ENST00000558806 WASHC2AQ641Q2 1341 aa14.83□□□□□ -0.04
AP3S2-206ENST00000558806 ANKRD26Q9UPS8 1709 aa14.83□□□□□ -0.04
AP3S2-206ENST00000558806 NLGN2Q8NFZ4 835 aa14.82□□□□□ -0.04
AP3S2-206ENST00000558806 CLSPNQ9HAW4 1339 aa14.82□□□□□ -0.04
AP3S2-206ENST00000558806 TOGARAM1Q9Y4F4 1720 aa14.81□□□□□ -0.04
AP3S2-206ENST00000558806 NKX1-1Q15270 411 aaPredicted RBP14.81□□□□□ -0.04
AP3S2-206ENST00000558806 GOLGB1Q14789 3259 aaKnown RBP14.81□□□□□ -0.04
AP3S2-206ENST00000558806 GRIN3BO60391 1043 aa14.8□□□□□ -0.04
AP3S2-206ENST00000558806 MSL1Q68DK7 614 aa14.8□□□□□ -0.04
AP3S2-206ENST00000558806 AK7Q96M32 723 aa14.8□□□□□ -0.04
AP3S2-206ENST00000558806 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.8□□□□□ -0.04
AP3S2-206ENST00000558806 TAF1LQ8IZX4 1826 aa14.8□□□□□ -0.04
AP3S2-206ENST00000558806 C4BP0C0L5 1744 aa14.79□□□□□ -0.04
AP3S2-206ENST00000558806 ITGB4P16144 1822 aa14.79□□□□□ -0.04
AP3S2-206ENST00000558806 PIGBQ92521 554 aa14.79□□□□□ -0.04
AP3S2-206ENST00000558806 C1QTNF8P60827 252 aa14.78□□□□□ -0.04
AP3S2-206ENST00000558806 EYA1Q99502 592 aa14.78□□□□□ -0.04
AP3S2-206ENST00000558806 POLKQ9UBT6 870 aa14.78□□□□□ -0.04
AP3S2-206ENST00000558806 CD2APQ9Y5K6 639 aa14.78□□□□□ -0.04
AP3S2-206ENST00000558806 PLEKHG2Q9H7P9 1386 aa14.77□□□□□ -0.04
AP3S2-206ENST00000558806 IFNL2Q8IZJ0 200 aa14.77□□□□□ -0.05
AP3S2-206ENST00000558806 TMOD3Q9NYL9 352 aa14.77□□□□□ -0.05
AP3S2-206ENST00000558806 MAP2P11137 1827 aaKnown RBP14.76□□□□□ -0.05
AP3S2-206ENST00000558806 YBX3P16989 372 aaKnown RBP eCLIP14.76□□□□□ -0.052e-6■■□□□ 12.4
AP3S2-206ENST00000558806 POLR3GLQ9BT43 218 aa14.76□□□□□ -0.05
AP3S2-206ENST00000558806 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.75□□□□□ -0.05
AP3S2-206ENST00000558806 LOC102724428A0A0B4J2F2 783 aa14.75□□□□□ -0.05
AP3S2-206ENST00000558806 GIGYF1O75420 1035 aaPredicted RBP14.75□□□□□ -0.05
AP3S2-206ENST00000558806 PHF14O94880 888 aa14.75□□□□□ -0.05
AP3S2-206ENST00000558806 PHKG2P15735 406 aa14.75□□□□□ -0.05
AP3S2-206ENST00000558806 SSFA2P28290 1259 aa14.75□□□□□ -0.05
AP3S2-206ENST00000558806 SIK1P57059 783 aa14.75□□□□□ -0.05
AP3S2-206ENST00000558806 EIF4A2Q14240 407 aaKnown RBP14.74□□□□□ -0.05
AP3S2-206ENST00000558806 UBR3Q6ZT12 1888 aa14.74□□□□□ -0.05
AP3S2-206ENST00000558806 SENP3-EIF4A1A0A087X0R7 540 aa14.73□□□□□ -0.05
AP3S2-206ENST00000558806 TNNT2P45379 298 aaPredicted RBP14.73□□□□□ -0.05
AP3S2-206ENST00000558806 EIF4G2P78344 907 aaKnown RBP eCLIP14.73□□□□□ -0.05
AP3S2-206ENST00000558806 LINC00116Q8NCU8 138 aa14.73□□□□□ -0.05
AP3S2-206ENST00000558806 PCGF6Q9BYE7 350 aa14.73□□□□□ -0.05
AP3S2-206ENST00000558806 ASAP1Q9ULH1 1129 aa14.73□□□□□ -0.05
AP3S2-206ENST00000558806 ATP6V1AP38606 617 aa14.72□□□□□ -0.05
AP3S2-206ENST00000558806 AMIGO3Q86WK7 504 aa14.72□□□□□ -0.05
AP3S2-206ENST00000558806 IGSF1Q8N6C5 1336 aa14.71□□□□□ -0.05
AP3S2-206ENST00000558806 HSP90AB1P08238 724 aaKnown RBP14.71□□□□□ -0.05
AP3S2-206ENST00000558806 GNPATO15228 680 aa14.7□□□□□ -0.06
AP3S2-206ENST00000558806 ITPK1Q13572 414 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms