RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 CHMP4CQ96CF2 233 aa10.53□□□□□ -0.72
MARK3-210ENST00000556463 AK9Q5TCS8 1911 aa10.53□□□□□ -0.72
MARK3-210ENST00000556463 HSP90AB1P08238 724 aaKnown RBP10.52□□□□□ -0.72
MARK3-210ENST00000556463 HECW2Q9P2P5 1572 aa10.52□□□□□ -0.72
MARK3-210ENST00000556463 KIF24Q5T7B8 1368 aa10.52□□□□□ -0.72
MARK3-210ENST00000556463 IPO8O15397 1037 aaKnown RBP10.52□□□□□ -0.73
MARK3-210ENST00000556463 ASXL2Q76L83 1435 aa10.52□□□□□ -0.73
MARK3-210ENST00000556463 FRMPD1Q5SYB0 1578 aa10.52□□□□□ -0.73
MARK3-210ENST00000556463 ABCC4O15439 1325 aa10.52□□□□□ -0.73
MARK3-210ENST00000556463 SIGLEC1Q9BZZ2 1709 aa10.52□□□□□ -0.73
MARK3-210ENST00000556463 FAM135BQ49AJ0 1406 aa10.52□□□□□ -0.73
MARK3-210ENST00000556463 ERICH4A6NGS2 130 aa10.52□□□□□ -0.73
MARK3-210ENST00000556463 U2AF1L5P0DN76 240 aaPredicted RBP10.52□□□□□ -0.73
MARK3-210ENST00000556463 IRX3P78415 501 aaPredicted RBP10.52□□□□□ -0.73
MARK3-210ENST00000556463 U2AF1Q01081 240 aaKnown RBP eCLIP10.52□□□□□ -0.73
MARK3-210ENST00000556463 SECISBP2LQ93073 1101 aaKnown RBP10.52□□□□□ -0.73
MARK3-210ENST00000556463 LNPKQ9C0E8 428 aa10.52□□□□□ -0.73
MARK3-210ENST00000556463 TUBGCP6Q96RT7 1819 aa10.52□□□□□ -0.73
MARK3-210ENST00000556463 LRRC7Q96NW7 1537 aa10.52□□□□□ -0.73
MARK3-210ENST00000556463 NPATQ14207 1427 aa10.51□□□□□ -0.73
MARK3-210ENST00000556463 MCM5P33992 734 aa10.51□□□□□ -0.73
MARK3-210ENST00000556463 RBM42Q9BTD8 480 aaKnown RBP10.51□□□□□ -0.73
MARK3-210ENST00000556463 KIF20BQ96Q89 1820 aa10.51□□□□□ -0.73
MARK3-210ENST00000556463 ZSCAN23Q3MJ62 389 aa10.51□□□□□ -0.73
MARK3-210ENST00000556463 A0A1W2PP64 1363 aa10.51□□□□□ -0.73
MARK3-210ENST00000556463 ZFYVE9O95405 1425 aa10.5□□□□□ -0.73
MARK3-210ENST00000556463 PATL2C9JE40 543 aaKnown RBP10.5□□□□□ -0.73
MARK3-210ENST00000556463 GSPT1P15170 499 aaKnown RBP10.5□□□□□ -0.73
MARK3-210ENST00000556463 RBSNQ9H1K0 784 aa10.5□□□□□ -0.73
MARK3-210ENST00000556463 MRPL50Q8N5N7 158 aaKnown RBP10.5□□□□□ -0.73
MARK3-210ENST00000556463 TMEM51Q9NW97 253 aa10.49□□□□□ -0.73
MARK3-210ENST00000556463 ZDHHC9Q9Y397 364 aa10.49□□□□□ -0.73
MARK3-210ENST00000556463 RABEP1Q15276 862 aa10.49□□□□□ -0.73
MARK3-210ENST00000556463 TRAK1Q9UPV9 953 aa10.49□□□□□ -0.73
MARK3-210ENST00000556463 EVC2Q86UK5 1308 aa10.49□□□□□ -0.73
MARK3-210ENST00000556463 ZNF853P0CG23 659 aa10.49□□□□□ -0.73
MARK3-210ENST00000556463 NUCB2P80303 420 aa10.49□□□□□ -0.73
MARK3-210ENST00000556463 USP26Q9BXU7 913 aa10.49□□□□□ -0.73
MARK3-210ENST00000556463 DDX49Q9Y6V7 483 aaKnown RBP10.49□□□□□ -0.73
MARK3-210ENST00000556463 KIF3BO15066 747 aa10.48□□□□□ -0.73
MARK3-210ENST00000556463 VAMP4O75379 141 aa10.48□□□□□ -0.73
MARK3-210ENST00000556463 DMTNQ08495 405 aa10.48□□□□□ -0.73
MARK3-210ENST00000556463 GPT2Q8TD30 523 aa10.48□□□□□ -0.73
MARK3-210ENST00000556463 ZNF526Q8TF50 670 aaPredicted RBP10.48□□□□□ -0.73
MARK3-210ENST00000556463 CWC22Q9HCG8 908 aaKnown RBP10.48□□□□□ -0.73
MARK3-210ENST00000556463 ZKSCAN5Q9Y2L8 839 aa10.48□□□□□ -0.73
MARK3-210ENST00000556463 PTPRMP28827 1452 aa10.48□□□□□ -0.73
MARK3-210ENST00000556463 CDC45O75419 566 aa10.48□□□□□ -0.73
MARK3-210ENST00000556463 RNF214Q8ND24 703 aa10.48□□□□□ -0.73
MARK3-210ENST00000556463 GOLGA6L22H0YM25 854 aa10.47□□□□□ -0.73
MARK3-210ENST00000556463 PLEKHM2Q8IWE5 1019 aa10.47□□□□□ -0.73
MARK3-210ENST00000556463 IL17RAQ96F46 866 aa10.47□□□□□ -0.73
MARK3-210ENST00000556463 DYNC1I1O14576 645 aa10.46□□□□□ -0.73
MARK3-210ENST00000556463 PRIM1P49642 420 aaKnown RBP10.46□□□□□ -0.73
MARK3-210ENST00000556463 MTERF4Q7Z6M4 381 aaKnown RBP10.46□□□□□ -0.73
MARK3-210ENST00000556463 DLG5Q8TDM6 1919 aa10.46□□□□□ -0.73
MARK3-210ENST00000556463 FYB1O15117 783 aa10.46□□□□□ -0.73
MARK3-210ENST00000556463 ATP10DQ9P241 1426 aa10.46□□□□□ -0.73
MARK3-210ENST00000556463 FCHSD2O94868 740 aa10.46□□□□□ -0.74
MARK3-210ENST00000556463 ANKRD45Q5TZF3 282 aa10.46□□□□□ -0.74
MARK3-210ENST00000556463 FOXD4L5Q5VV16 416 aaPredicted RBP10.46□□□□□ -0.74
MARK3-210ENST00000556463 FOXD4L4Q8WXT5 416 aaPredicted RBP10.46□□□□□ -0.74
MARK3-210ENST00000556463 DCTPP1Q9H773 170 aa10.46□□□□□ -0.74
MARK3-210ENST00000556463 PKP1Q13835 747 aa10.45□□□□□ -0.74
MARK3-210ENST00000556463 LRSAM1Q6UWE0 723 aa10.45□□□□□ -0.74
MARK3-210ENST00000556463 CCDC94Q9BW85 323 aaPredicted RBP10.45□□□□□ -0.74
MARK3-210ENST00000556463 GPBP1L1Q9HC44 474 aaPredicted RBP10.45□□□□□ -0.74
MARK3-210ENST00000556463 RGS12O14924 1447 aa10.45□□□□□ -0.74
MARK3-210ENST00000556463 TRIM6-TRIM34B2RNG4 842 aa10.45□□□□□ -0.74
MARK3-210ENST00000556463 TTC22Q5TAA0 569 aa10.45□□□□□ -0.74
MARK3-210ENST00000556463 TRIM34Q9BYJ4 488 aa10.45□□□□□ -0.74
MARK3-210ENST00000556463 CSPP1Q1MSJ5 1256 aa10.44□□□□□ -0.74
MARK3-210ENST00000556463 APBB1O00213 710 aa10.44□□□□□ -0.74
MARK3-210ENST00000556463 TMEM132EQ6IEE7 984 aa10.44□□□□□ -0.74
MARK3-210ENST00000556463 CAVIN1Q6NZI2 390 aaKnown RBP10.44□□□□□ -0.74
MARK3-210ENST00000556463 TMX1Q9H3N1 280 aa10.44□□□□□ -0.74
MARK3-210ENST00000556463 TMEM63CQ9P1W3 806 aa10.44□□□□□ -0.74
MARK3-210ENST00000556463 ARHGEF40Q8TER5 1519 aa10.43□□□□□ -0.74
MARK3-210ENST00000556463 MLH3Q9UHC1 1453 aa10.43□□□□□ -0.74
MARK3-210ENST00000556463 GTF2F1P35269 517 aaKnown RBP eCLIP10.43□□□□□ -0.74
MARK3-210ENST00000556463 MCTP1Q6DN14 999 aa10.43□□□□□ -0.74
MARK3-210ENST00000556463 CPSF1Q10570 1443 aaKnown RBP10.43□□□□□ -0.74
MARK3-210ENST00000556463 ATAD2Q6PL18 1390 aa10.42□□□□□ -0.74
MARK3-210ENST00000556463 IFT57Q9NWB7 429 aa10.42□□□□□ -0.74
MARK3-210ENST00000556463 TNNT1P13805 278 aa10.42□□□□□ -0.74
MARK3-210ENST00000556463 SASS6Q6UVJ0 657 aa10.42□□□□□ -0.74
MARK3-210ENST00000556463 MAP2P11137 1827 aaKnown RBP10.42□□□□□ -0.74
MARK3-210ENST00000556463 DIAPH1O60610 1272 aaKnown RBP10.41□□□□□ -0.74
MARK3-210ENST00000556463 LETM1O95202 739 aaPredicted RBP10.41□□□□□ -0.74
MARK3-210ENST00000556463 ZSCAN20P17040 1043 aaPredicted RBP10.41□□□□□ -0.74
MARK3-210ENST00000556463 INTS3Q68E01 1043 aaKnown RBP10.41□□□□□ -0.74
MARK3-210ENST00000556463 TSPYL6Q8N831 410 aa10.41□□□□□ -0.74
MARK3-210ENST00000556463 CABP2Q9NPB3 220 aa10.41□□□□□ -0.74
MARK3-210ENST00000556463 NSFL1CQ9UNZ2 370 aaKnown RBP10.41□□□□□ -0.74
MARK3-210ENST00000556463 FOXD4L6Q3SYB3 417 aaPredicted RBP10.41□□□□□ -0.74
MARK3-210ENST00000556463 FOXD4L3Q6VB84 417 aaPredicted RBP10.41□□□□□ -0.74
MARK3-210ENST00000556463 CCDC39Q9UFE4 941 aa10.41□□□□□ -0.74
MARK3-210ENST00000556463 CUL4AQ13619 759 aa10.4□□□□□ -0.74
MARK3-210ENST00000556463 UTP14CQ5TAP6 766 aaKnown RBP10.4□□□□□ -0.74
MARK3-210ENST00000556463 ZGPATQ8N5A5 531 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms