RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 PARP4Q9UKK3 1724 aaKnown RBP18.87■□□□□ 0.61
SNX6-206ENST00000556162 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.87■□□□□ 0.612e-7■■■■□ 22.3
SNX6-206ENST00000556162 SPG7Q9UQ90 795 aa18.87■□□□□ 0.61
SNX6-206ENST00000556162 WNK3Q9BYP7 1800 aa18.87■□□□□ 0.61
SNX6-206ENST00000556162 FCHSD2O94868 740 aa18.86■□□□□ 0.61
SNX6-206ENST00000556162 WDR43Q15061 677 aaKnown RBP eCLIP18.86■□□□□ 0.61
SNX6-206ENST00000556162 DDX54Q8TDD1 881 aaKnown RBP18.86■□□□□ 0.61
SNX6-206ENST00000556162 MRS2Q9HD23 443 aa18.86■□□□□ 0.61
SNX6-206ENST00000556162 TNS2Q63HR2 1409 aa18.86■□□□□ 0.61
SNX6-206ENST00000556162 AMOTQ4VCS5 1084 aa18.86■□□□□ 0.61
SNX6-206ENST00000556162 CCDC184Q52MB2 194 aa18.86■□□□□ 0.61
SNX6-206ENST00000556162 PLEKHO1Q53GL0 409 aaPredicted RBP18.86■□□□□ 0.61
SNX6-206ENST00000556162 MARCH10Q8NA82 808 aaPredicted RBP18.85■□□□□ 0.61
SNX6-206ENST00000556162 PLEKHG2Q9H7P9 1386 aa18.85■□□□□ 0.61
SNX6-206ENST00000556162 FAM182BQ5T319 152 aa18.84■□□□□ 0.61
SNX6-206ENST00000556162 RSPH6AQ9H0K4 717 aa18.84■□□□□ 0.61
SNX6-206ENST00000556162 LRRC37A3O60309 1634 aa18.84■□□□□ 0.61
SNX6-206ENST00000556162 BRWD3Q6RI45 1802 aa18.84■□□□□ 0.61
SNX6-206ENST00000556162 PRKAR2BP31323 418 aa18.84■□□□□ 0.61
SNX6-206ENST00000556162 PNNQ9H307 717 aaKnown RBP18.84■□□□□ 0.61
SNX6-206ENST00000556162 PCDH11XQ9BZA7 1347 aa18.83■□□□□ 0.61
SNX6-206ENST00000556162 PCDH11YQ9BZA8 1340 aa18.83■□□□□ 0.61
SNX6-206ENST00000556162 FAM196AQ6ZSG2 479 aa18.82■□□□□ 0.6
SNX6-206ENST00000556162 NEFMP07197 916 aa18.82■□□□□ 0.6
SNX6-206ENST00000556162 EP400Q96L91 3159 aa18.8■□□□□ 0.6
SNX6-206ENST00000556162 CYP27B1O15528 508 aa18.8■□□□□ 0.6
SNX6-206ENST00000556162 IFNL2Q8IZJ0 200 aa18.8■□□□□ 0.6
SNX6-206ENST00000556162 ADAMTS8Q9UP79 889 aa18.8■□□□□ 0.6
SNX6-206ENST00000556162 ZNF530Q6P9A1 599 aaPredicted RBP18.8■□□□□ 0.6
SNX6-206ENST00000556162 MIER1Q8N108 512 aa18.79■□□□□ 0.6
SNX6-206ENST00000556162 PNISRQ8TF01 805 aaKnown RBP18.79■□□□□ 0.6
SNX6-206ENST00000556162 CCER2I3L3R5 266 aa18.78■□□□□ 0.6
SNX6-206ENST00000556162 PHKG2P15735 406 aa18.78■□□□□ 0.6
SNX6-206ENST00000556162 MTHFSDQ2M296 383 aaKnown RBP18.78■□□□□ 0.6
SNX6-206ENST00000556162 C1orf141Q5JVX7 400 aa18.78■□□□□ 0.6
SNX6-206ENST00000556162 PHACTR3Q96KR7 559 aa18.78■□□□□ 0.6
SNX6-206ENST00000556162 GAS2L2Q8NHY3 880 aa18.77■□□□□ 0.6
SNX6-206ENST00000556162 PLEKHF1Q96S99 279 aa18.77■□□□□ 0.6
SNX6-206ENST00000556162 PKD1L3Q7Z443 1732 aa18.77■□□□□ 0.59
SNX6-206ENST00000556162 MAPK8IP3Q9UPT6 1336 aa18.77■□□□□ 0.59
SNX6-206ENST00000556162 HSP90AB1P08238 724 aaKnown RBP18.75■□□□□ 0.59
SNX6-206ENST00000556162 AKAP4Q5JQC9 854 aa18.75■□□□□ 0.59
SNX6-206ENST00000556162 BCL9O00512 1426 aa18.75■□□□□ 0.59
SNX6-206ENST00000556162 NKX1-1Q15270 411 aaPredicted RBP18.75■□□□□ 0.59
SNX6-206ENST00000556162 SHANK3Q9BYB0 1731 aa18.74■□□□□ 0.59
SNX6-206ENST00000556162 CCDC146Q8IYE0 955 aa18.73■□□□□ 0.59
SNX6-206ENST00000556162 RUNDC1Q96C34 613 aa18.73■□□□□ 0.59
SNX6-206ENST00000556162 TRIM37O94972 964 aa18.73■□□□□ 0.59
SNX6-206ENST00000556162 FAM9BQ8IZU0 186 aa18.73■□□□□ 0.59
SNX6-206ENST00000556162 ACSBG1Q96GR2 724 aa18.73■□□□□ 0.59
SNX6-206ENST00000556162 DCAF5Q96JK2 942 aa18.73■□□□□ 0.59
SNX6-206ENST00000556162 MPRIPQ6WCQ1 1025 aa18.71■□□□□ 0.59
SNX6-206ENST00000556162 GNAT3A8MTJ3 354 aa18.71■□□□□ 0.59
SNX6-206ENST00000556162 CCDC125Q86Z20 511 aa18.71■□□□□ 0.59
SNX6-206ENST00000556162 SYTL4Q96C24 671 aaPredicted RBP18.71■□□□□ 0.59
SNX6-206ENST00000556162 KCNQ2O43526 872 aa18.7■□□□□ 0.58
SNX6-206ENST00000556162 PRIM1P49642 420 aaKnown RBP18.7■□□□□ 0.58
SNX6-206ENST00000556162 SF3B2Q13435 895 aaKnown RBP18.7■□□□□ 0.58
SNX6-206ENST00000556162 UPF1Q92900 1129 aaKnown RBP eCLIP18.7■□□□□ 0.58
SNX6-206ENST00000556162 BCL11BQ9C0K0 894 aaPredicted RBP18.7■□□□□ 0.58
SNX6-206ENST00000556162 NFE2L2Q16236 605 aa18.69■□□□□ 0.58
SNX6-206ENST00000556162 RTF1Q92541 710 aaKnown RBP18.69■□□□□ 0.58
SNX6-206ENST00000556162 MAP3K5Q99683 1374 aa18.68■□□□□ 0.58
SNX6-206ENST00000556162 ERVV-2B6SEH9 535 aa18.68■□□□□ 0.58
SNX6-206ENST00000556162 KAT6BQ8WYB5 2073 aa18.68■□□□□ 0.58
SNX6-206ENST00000556162 LGR6Q9HBX8 967 aa18.67■□□□□ 0.58
SNX6-206ENST00000556162 RNMTO43148 476 aaKnown RBP18.67■□□□□ 0.58
SNX6-206ENST00000556162 HTATSF1O43719 755 aaKnown RBP18.67■□□□□ 0.58
SNX6-206ENST00000556162 TMPOP42166 694 aaKnown RBP18.67■□□□□ 0.58
SNX6-206ENST00000556162 RIPK4P57078 832 aa18.66■□□□□ 0.58
SNX6-206ENST00000556162 CABP4P57796 275 aa18.66■□□□□ 0.58
SNX6-206ENST00000556162 PTF1AQ7RTS3 328 aa18.66■□□□□ 0.58
SNX6-206ENST00000556162 KDM6AO15550 1401 aaPredicted RBP18.65■□□□□ 0.58
SNX6-206ENST00000556162 SOCS7O14512 581 aa18.65■□□□□ 0.58
SNX6-206ENST00000556162 APAF1O14727 1248 aa18.65■□□□□ 0.58
SNX6-206ENST00000556162 APBA3O96018 575 aa18.65■□□□□ 0.58
SNX6-206ENST00000556162 NEUROD2Q15784 382 aa18.65■□□□□ 0.58
SNX6-206ENST00000556162 TMOD3Q9NYL9 352 aa18.65■□□□□ 0.58
SNX6-206ENST00000556162 IL17REQ8NFR9 667 aa18.65■□□□□ 0.58
SNX6-206ENST00000556162 RRP7AQ9Y3A4 280 aaKnown RBP18.65■□□□□ 0.58
SNX6-206ENST00000556162 SBF2Q86WG5 1849 aa18.64■□□□□ 0.57
SNX6-206ENST00000556162 NFATC2IPQ8NCF5 419 aa18.63■□□□□ 0.57
SNX6-206ENST00000556162 PIGBQ92521 554 aa18.63■□□□□ 0.57
SNX6-206ENST00000556162 BAG6P46379 1132 aa18.63■□□□□ 0.57
SNX6-206ENST00000556162 LMOD3Q0VAK6 560 aa18.63■□□□□ 0.57
SNX6-206ENST00000556162 MCM10Q7L590 875 aa18.63■□□□□ 0.57
SNX6-206ENST00000556162 DOT1LQ8TEK3 1739 aa18.62■□□□□ 0.57
SNX6-206ENST00000556162 NHSQ6T4R5 1651 aa18.62■□□□□ 0.57
SNX6-206ENST00000556162 TEFQ10587 303 aa18.62■□□□□ 0.57
SNX6-206ENST00000556162 DCTN1Q14203 1278 aa18.62■□□□□ 0.57
SNX6-206ENST00000556162 SLC52A2Q9HAB3 445 aa18.62■□□□□ 0.57
SNX6-206ENST00000556162 PLSCR1O15162 318 aa18.6■□□□□ 0.57
SNX6-206ENST00000556162 TOGARAM1Q9Y4F4 1720 aa18.6■□□□□ 0.57
SNX6-206ENST00000556162 CEMIPQ8WUJ3 1361 aa18.59■□□□□ 0.57
SNX6-206ENST00000556162 DEFB132Q7Z7B7 95 aa18.59■□□□□ 0.57
SNX6-206ENST00000556162 EN1Q05925 392 aaPredicted RBP18.58■□□□□ 0.57
SNX6-206ENST00000556162 SCN11AQ9UI33 1791 aa18.58■□□□□ 0.57
SNX6-206ENST00000556162 SMARCC1Q92922 1105 aaPredicted RBP18.58■□□□□ 0.56
SNX6-206ENST00000556162 TRIM35Q9UPQ4 493 aa18.58■□□□□ 0.56
SNX6-206ENST00000556162 SENP3-EIF4A1A0A087X0R7 540 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms