RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 LTN1O94822 1766 aa11.99□□□□□ -0.49
NEK9-206ENST00000555537 ROCK2O75116 1388 aaKnown RBP11.98□□□□□ -0.49
NEK9-206ENST00000555537 IP6K1Q92551 441 aa11.98□□□□□ -0.49
NEK9-206ENST00000555537 GPBP1L1Q9HC44 474 aaPredicted RBP11.98□□□□□ -0.49
NEK9-206ENST00000555537 QSER1Q2KHR3 1735 aa11.97□□□□□ -0.49
NEK9-206ENST00000555537 CD163L1Q9NR16 1453 aa11.97□□□□□ -0.49
NEK9-206ENST00000555537 NSD2O96028 1365 aa11.97□□□□□ -0.49
NEK9-206ENST00000555537 ANKRD36BQ8N2N9 1353 aa11.97□□□□□ -0.49
NEK9-206ENST00000555537 NEUROD1Q13562 356 aa11.97□□□□□ -0.49
NEK9-206ENST00000555537 ZCRB1Q8TBF4 217 aaKnown RBP11.97□□□□□ -0.49
NEK9-206ENST00000555537 HSPA6P17066 643 aa11.96□□□□□ -0.49
NEK9-206ENST00000555537 SMIM5Q71RC9 77 aa11.96□□□□□ -0.49
NEK9-206ENST00000555537 HDGFL2Q7Z4V5 671 aaPredicted RBP11.96□□□□□ -0.49
NEK9-206ENST00000555537 MON2Q7Z3U7 1717 aa11.96□□□□□ -0.49
NEK9-206ENST00000555537 CD2APQ9Y5K6 639 aa11.94□□□□□ -0.5
NEK9-206ENST00000555537 LY75O60449 1722 aa11.94□□□□□ -0.5
NEK9-206ENST00000555537 DOT1LQ8TEK3 1739 aa11.94□□□□□ -0.5
NEK9-206ENST00000555537 USP47Q96K76 1375 aa11.93□□□□□ -0.5
NEK9-206ENST00000555537 HOXC9P31274 260 aa11.93□□□□□ -0.5
NEK9-206ENST00000555537 AMPHP49418 695 aa11.93□□□□□ -0.5
NEK9-206ENST00000555537 USHBP1Q8N6Y0 703 aa11.93□□□□□ -0.5
NEK9-206ENST00000555537 MAP3K19Q56UN5 1328 aa11.92□□□□□ -0.5
NEK9-206ENST00000555537 NBPF6Q5VWK0 638 aa11.92□□□□□ -0.5
NEK9-206ENST00000555537 AMIGO3Q86WK7 504 aa11.92□□□□□ -0.5
NEK9-206ENST00000555537 NBPF4Q96M43 638 aa11.92□□□□□ -0.5
NEK9-206ENST00000555537 RGPD2P0DJD1 1756 aa11.92□□□□□ -0.5
NEK9-206ENST00000555537 A0A1W2PP64 1363 aa11.92□□□□□ -0.5
NEK9-206ENST00000555537 MEGF6O75095 1541 aa11.91□□□□□ -0.5
NEK9-206ENST00000555537 USP54Q70EL1 1684 aa11.91□□□□□ -0.5
NEK9-206ENST00000555537 TERF2IPQ9NYB0 399 aa11.91□□□□□ -0.5
NEK9-206ENST00000555537 EDC4Q6P2E9 1401 aaKnown RBP11.91□□□□□ -0.5
NEK9-206ENST00000555537 KIF3CO14782 793 aa11.9□□□□□ -0.5
NEK9-206ENST00000555537 MPRIPQ6WCQ1 1025 aa11.9□□□□□ -0.5
NEK9-206ENST00000555537 CARD11Q9BXL7 1154 aa11.9□□□□□ -0.5
NEK9-206ENST00000555537 ADCY9O60503 1353 aa11.9□□□□□ -0.5
NEK9-206ENST00000555537 IGSF1Q8N6C5 1336 aa11.89□□□□□ -0.51
NEK9-206ENST00000555537 PHF14O94880 888 aa11.89□□□□□ -0.51
NEK9-206ENST00000555537 RRS1Q15050 365 aaKnown RBP11.89□□□□□ -0.51
NEK9-206ENST00000555537 COG3Q96JB2 828 aa11.89□□□□□ -0.51
NEK9-206ENST00000555537 FAM208AQ9UK61 1670 aaKnown RBP11.88□□□□□ -0.51
NEK9-206ENST00000555537 FLAD1Q8NFF5 587 aa11.87□□□□□ -0.51
NEK9-206ENST00000555537 RAPGEF4Q8WZA2 1011 aa11.87□□□□□ -0.51
NEK9-206ENST00000555537 AK7Q96M32 723 aa11.87□□□□□ -0.51
NEK9-206ENST00000555537 PALLDQ8WX93 1383 aa11.87□□□□□ -0.51
NEK9-206ENST00000555537 TATP17735 454 aaPredicted RBP11.86□□□□□ -0.51
NEK9-206ENST00000555537 C5P01031 1676 aa11.86□□□□□ -0.51
NEK9-206ENST00000555537 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.85□□□□□ -0.51
NEK9-206ENST00000555537 HSP90AB2PQ58FF8 381 aa11.85□□□□□ -0.51
NEK9-206ENST00000555537 DNAJC5GQ8N7S2 189 aa11.85□□□□□ -0.51
NEK9-206ENST00000555537 CYP27B1O15528 508 aa11.84□□□□□ -0.51
NEK9-206ENST00000555537 GGNBP2Q9H3C7 697 aa11.84□□□□□ -0.51
NEK9-206ENST00000555537 APLP1P51693 650 aa11.83□□□□□ -0.52
NEK9-206ENST00000555537 LINC00116Q8NCU8 138 aa11.83□□□□□ -0.52
NEK9-206ENST00000555537 PIGBQ92521 554 aa11.83□□□□□ -0.52
NEK9-206ENST00000555537 TAF1LQ8IZX4 1826 aa11.83□□□□□ -0.52
NEK9-206ENST00000555537 CGNL1Q0VF96 1302 aa11.83□□□□□ -0.52
NEK9-206ENST00000555537 FYB1O15117 783 aa11.82□□□□□ -0.52
NEK9-206ENST00000555537 HTRA3P83110 453 aa11.82□□□□□ -0.52
NEK9-206ENST00000555537 SMARCC1Q92922 1105 aaPredicted RBP11.82□□□□□ -0.52
NEK9-206ENST00000555537 PUS7Q96PZ0 661 aaKnown RBP11.82□□□□□ -0.52
NEK9-206ENST00000555537 NMRK2Q9NPI5 230 aa11.82□□□□□ -0.52
NEK9-206ENST00000555537 C4BP0C0L5 1744 aa11.82□□□□□ -0.52
NEK9-206ENST00000555537 PCDH11XQ9BZA7 1347 aa11.82□□□□□ -0.52
NEK9-206ENST00000555537 PCDH11YQ9BZA8 1340 aa11.82□□□□□ -0.52
NEK9-206ENST00000555537 TOGARAM1Q9Y4F4 1720 aa11.81□□□□□ -0.52
NEK9-206ENST00000555537 A0A0G2JLW4 131 aa11.81□□□□□ -0.52
NEK9-206ENST00000555537 TOMM70O94826 608 aa11.81□□□□□ -0.52
NEK9-206ENST00000555537 ARHGAP27Q6ZUM4 889 aa11.81□□□□□ -0.52
NEK9-206ENST00000555537 BCS1LQ9Y276 419 aa11.81□□□□□ -0.52
NEK9-206ENST00000555537 ST20-MTHFSA0A0A6YYL1 179 aa11.8□□□□□ -0.52
NEK9-206ENST00000555537 LOC102724428A0A0B4J2F2 783 aa11.8□□□□□ -0.52
NEK9-206ENST00000555537 GNPATO15228 680 aa11.8□□□□□ -0.52
NEK9-206ENST00000555537 MMP10P09238 476 aa11.8□□□□□ -0.52
NEK9-206ENST00000555537 SSFA2P28290 1259 aa11.8□□□□□ -0.52
NEK9-206ENST00000555537 SIK1P57059 783 aa11.8□□□□□ -0.52
NEK9-206ENST00000555537 ITPK1Q13572 414 aa11.8□□□□□ -0.52
NEK9-206ENST00000555537 TESK2Q96S53 571 aa11.8□□□□□ -0.52
NEK9-206ENST00000555537 ASAP1Q9ULH1 1129 aa11.8□□□□□ -0.52
NEK9-206ENST00000555537 UBR3Q6ZT12 1888 aa11.79□□□□□ -0.52
NEK9-206ENST00000555537 CAPN15O75808 1086 aa11.79□□□□□ -0.52
NEK9-206ENST00000555537 HMGB2P26583 209 aaKnown RBP11.79□□□□□ -0.52
NEK9-206ENST00000555537 COL13A1Q5TAT6 717 aaPredicted RBP11.79□□□□□ -0.52
NEK9-206ENST00000555537 RTL1A6NKG5 1358 aa11.79□□□□□ -0.52
NEK9-206ENST00000555537 ATP6V1AP38606 617 aa11.78□□□□□ -0.52
NEK9-206ENST00000555537 ITGB4P16144 1822 aa11.78□□□□□ -0.52
NEK9-206ENST00000555537 SMG6Q86US8 1419 aaKnown RBP11.77□□□□□ -0.52
NEK9-206ENST00000555537 DPEP1P16444 411 aa11.77□□□□□ -0.53
NEK9-206ENST00000555537 NKX1-1Q15270 411 aaPredicted RBP11.77□□□□□ -0.53
NEK9-206ENST00000555537 INSRP06213 1382 aa11.77□□□□□ -0.53
NEK9-206ENST00000555537 N4BP2Q86UW6 1770 aaPredicted RBP11.77□□□□□ -0.53
NEK9-206ENST00000555537 PXDNLA1KZ92 1463 aa11.76□□□□□ -0.53
NEK9-206ENST00000555537 PPM1GO15355 546 aaPredicted RBP11.76□□□□□ -0.53
NEK9-206ENST00000555537 FCHSD2O94868 740 aa11.76□□□□□ -0.53
NEK9-206ENST00000555537 TGFB2P61812 414 aa11.76□□□□□ -0.53
NEK9-206ENST00000555537 ATG3Q9NT62 314 aa11.76□□□□□ -0.53
NEK9-206ENST00000555537 TMOD3Q9NYL9 352 aa11.76□□□□□ -0.53
NEK9-206ENST00000555537 EMILIN1Q9Y6C2 1016 aa11.76□□□□□ -0.53
NEK9-206ENST00000555537 MAP2P11137 1827 aaKnown RBP11.75□□□□□ -0.53
NEK9-206ENST00000555537 TRAPPC3LQ5T215 181 aa11.75□□□□□ -0.53
NEK9-206ENST00000555537 C9orf131Q5VYM1 1079 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms