RNA–Protein interactions for RNA: ENST00000555082.5

PRKCH-211, Transcript of protein kinase C eta, humanhuman

TSL 1 (best) BASIC

Gene PRKCH, Length 2,932 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-211ENST00000555082 HAP1P54257 671 aaPredicted RBP12.62□□□□□ -0.39
PRKCH-211ENST00000555082 MTHFSDQ2M296 383 aaKnown RBP12.62□□□□□ -0.39
PRKCH-211ENST00000555082 KIAA0232Q92628 1395 aa12.62□□□□□ -0.39
PRKCH-211ENST00000555082 SLIT3O75094 1523 aa12.62□□□□□ -0.39
PRKCH-211ENST00000555082 IGHDP01880 384 aa12.62□□□□□ -0.39
PRKCH-211ENST00000555082 CCDC27Q2M243 656 aa12.62□□□□□ -0.39
PRKCH-211ENST00000555082 MCM10Q7L590 875 aa12.62□□□□□ -0.39
PRKCH-211ENST00000555082 ALS2Q96Q42 1657 aa12.62□□□□□ -0.39
PRKCH-211ENST00000555082 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.61□□□□□ -0.39
PRKCH-211ENST00000555082 WDR63Q8IWG1 891 aa12.61□□□□□ -0.39
PRKCH-211ENST00000555082 ARHGEF10O15013 1369 aa12.61□□□□□ -0.39
PRKCH-211ENST00000555082 UBE2Q2Q8WVN8 375 aa12.61□□□□□ -0.39
PRKCH-211ENST00000555082 LTN1O94822 1766 aa12.6□□□□□ -0.39
PRKCH-211ENST00000555082 NGEFQ8N5V2 710 aa12.6□□□□□ -0.39
PRKCH-211ENST00000555082 RTL1A6NKG5 1358 aa12.6□□□□□ -0.39
PRKCH-211ENST00000555082 USP54Q70EL1 1684 aa12.6□□□□□ -0.39
PRKCH-211ENST00000555082 BCL2L13Q9BXK5 485 aa12.6□□□□□ -0.39
PRKCH-211ENST00000555082 SPRYD3Q8NCJ5 442 aa12.59□□□□□ -0.39
PRKCH-211ENST00000555082 PRDM11Q9NQV5 511 aa12.59□□□□□ -0.39
PRKCH-211ENST00000555082 NLRP2Q9NX02 1062 aa12.59□□□□□ -0.39
PRKCH-211ENST00000555082 KIF24Q5T7B8 1368 aa12.59□□□□□ -0.39
PRKCH-211ENST00000555082 UBAP1LF5GYI3 381 aa12.58□□□□□ -0.39
PRKCH-211ENST00000555082 CSB-PGBD3P0DP91 1061 aa12.58□□□□□ -0.39
PRKCH-211ENST00000555082 KDRP35968 1356 aa12.58□□□□□ -0.4
PRKCH-211ENST00000555082 EXOSC9Q06265 439 aaKnown RBP12.58□□□□□ -0.4
PRKCH-211ENST00000555082 MIS18AQ9NYP9 233 aa12.58□□□□□ -0.4
PRKCH-211ENST00000555082 FAM43AQ8N2R8 423 aa12.58□□□□□ -0.4
PRKCH-211ENST00000555082 ERBB3P21860 1342 aa12.58□□□□□ -0.4
PRKCH-211ENST00000555082 RGPD1P0DJD0 1748 aa12.57□□□□□ -0.4
PRKCH-211ENST00000555082 ELL2O00472 640 aaPredicted RBP12.57□□□□□ -0.4
PRKCH-211ENST00000555082 PANK1Q8TE04 598 aa12.57□□□□□ -0.4
PRKCH-211ENST00000555082 RRAGDQ9NQL2 400 aaPredicted RBP12.57□□□□□ -0.4
PRKCH-211ENST00000555082 COG6Q9Y2V7 657 aa12.56□□□□□ -0.4
PRKCH-211ENST00000555082 ROBO1Q9Y6N7 1651 aa12.56□□□□□ -0.4
PRKCH-211ENST00000555082 MYH16Q9H6N6 1097 aa12.56□□□□□ -0.4
PRKCH-211ENST00000555082 CANXP27824 592 aaKnown RBP12.55□□□□□ -0.4
PRKCH-211ENST00000555082 STRN4Q9NRL3 753 aa12.55□□□□□ -0.4
PRKCH-211ENST00000555082 TOM1O60784 492 aa12.55□□□□□ -0.4
PRKCH-211ENST00000555082 KRT24Q2M2I5 525 aa12.55□□□□□ -0.4
PRKCH-211ENST00000555082 GZF1Q9H116 711 aaPredicted RBP12.55□□□□□ -0.4
PRKCH-211ENST00000555082 MBIPQ9NS73 344 aa12.55□□□□□ -0.4
PRKCH-211ENST00000555082 TSPYL6Q8N831 410 aa12.54□□□□□ -0.4
PRKCH-211ENST00000555082 RGPD2P0DJD1 1756 aa12.54□□□□□ -0.4
PRKCH-211ENST00000555082 TNNQ9UQP3 1299 aa12.54□□□□□ -0.4
PRKCH-211ENST00000555082 PHRF1Q9P1Y6 1649 aaKnown RBP12.53□□□□□ -0.4
PRKCH-211ENST00000555082 NUTM2BA6NNL0 878 aaPredicted RBP12.53□□□□□ -0.4
PRKCH-211ENST00000555082 NUTM2EB1AL46 878 aaPredicted RBP12.53□□□□□ -0.4
PRKCH-211ENST00000555082 ADAMTS2O95450 1211 aa12.53□□□□□ -0.4
PRKCH-211ENST00000555082 NUTM2AQ8IVF1 878 aaPredicted RBP12.53□□□□□ -0.4
PRKCH-211ENST00000555082 RGPD5Q99666 1765 aa12.53□□□□□ -0.4
PRKCH-211ENST00000555082 NCBP3Q53F19 620 aaKnown RBP12.53□□□□□ -0.4
PRKCH-211ENST00000555082 IL17REQ8NFR9 667 aa12.52□□□□□ -0.4
PRKCH-211ENST00000555082 GAS2L2Q8NHY3 880 aa12.52□□□□□ -0.4
PRKCH-211ENST00000555082 RTF1Q92541 710 aaKnown RBP12.52□□□□□ -0.4
PRKCH-211ENST00000555082 LGR6Q9HBX8 967 aa12.52□□□□□ -0.4
PRKCH-211ENST00000555082 RARSP54136 660 aaKnown RBP12.52□□□□□ -0.41
PRKCH-211ENST00000555082 LMOD3Q0VAK6 560 aa12.52□□□□□ -0.41
PRKCH-211ENST00000555082 BECN1Q14457 450 aa12.52□□□□□ -0.41
PRKCH-211ENST00000555082 NHSL1Q5SYE7 1610 aa12.52□□□□□ -0.41
PRKCH-211ENST00000555082 ZNF530Q6P9A1 599 aaPredicted RBP12.51□□□□□ -0.41
PRKCH-211ENST00000555082 LARP1Q6PKG0 1096 aaKnown RBP12.51□□□□□ -0.41
PRKCH-211ENST00000555082 TOM1L2Q6ZVM7 507 aa12.51□□□□□ -0.41
PRKCH-211ENST00000555082 CPDO75976 1380 aa12.51□□□□□ -0.41
PRKCH-211ENST00000555082 IL16Q14005 1332 aa12.51□□□□□ -0.41
PRKCH-211ENST00000555082 GNAT3A8MTJ3 354 aa12.51□□□□□ -0.41
PRKCH-211ENST00000555082 ZNF853P0CG23 659 aa12.51□□□□□ -0.41
PRKCH-211ENST00000555082 MPRIPQ6WCQ1 1025 aa12.51□□□□□ -0.41
PRKCH-211ENST00000555082 C8orf58Q8NAV2 365 aa12.51□□□□□ -0.41
PRKCH-211ENST00000555082 CAMTA1Q9Y6Y1 1673 aa12.51□□□□□ -0.41
PRKCH-211ENST00000555082 CFAP44Q96MT7 982 aa12.51□□□□□ -0.41
PRKCH-211ENST00000555082 DLG5Q8TDM6 1919 aa12.5□□□□□ -0.41
PRKCH-211ENST00000555082 GNAI1P63096 354 aa12.5□□□□□ -0.41
PRKCH-211ENST00000555082 IFT57Q9NWB7 429 aa12.5□□□□□ -0.41
PRKCH-211ENST00000555082 BTG4Q9NY30 223 aa12.5□□□□□ -0.41
PRKCH-211ENST00000555082 CRYBG1Q9Y4K1 1723 aa12.5□□□□□ -0.41
PRKCH-211ENST00000555082 EVA1CP58658 441 aa12.49□□□□□ -0.41
PRKCH-211ENST00000555082 RAPGEF4Q8WZA2 1011 aa12.49□□□□□ -0.41
PRKCH-211ENST00000555082 COL18A1P39060 1754 aa12.49□□□□□ -0.41
PRKCH-211ENST00000555082 CERKQ8TCT0 537 aa12.49□□□□□ -0.41
PRKCH-211ENST00000555082 SSH1Q8WYL5 1049 aa12.49□□□□□ -0.41
PRKCH-211ENST00000555082 CLUAP1Q96AJ1 413 aa12.49□□□□□ -0.41
PRKCH-211ENST00000555082 PANK2Q9BZ23 570 aa12.49□□□□□ -0.41
PRKCH-211ENST00000555082 CRB1P82279 1406 aa12.48□□□□□ -0.41
PRKCH-211ENST00000555082 PLEKHO1Q53GL0 409 aaPredicted RBP12.48□□□□□ -0.41
PRKCH-211ENST00000555082 MAP3K5Q99683 1374 aa12.48□□□□□ -0.41
PRKCH-211ENST00000555082 MEGF6O75095 1541 aa12.48□□□□□ -0.41
PRKCH-211ENST00000555082 CHL1O00533 1208 aa12.48□□□□□ -0.41
PRKCH-211ENST00000555082 CALD1Q05682 793 aaKnown RBP12.48□□□□□ -0.41
PRKCH-211ENST00000555082 SMC4Q9NTJ3 1288 aa12.48□□□□□ -0.41
PRKCH-211ENST00000555082 TSPYL4Q9UJ04 414 aa12.48□□□□□ -0.41
PRKCH-211ENST00000555082 TBC1D2Q9BYX2 928 aa12.47□□□□□ -0.41
PRKCH-211ENST00000555082 WDR17Q8IZU2 1322 aa12.47□□□□□ -0.41
PRKCH-211ENST00000555082 VAMP4O75379 141 aa12.47□□□□□ -0.41
PRKCH-211ENST00000555082 TATP17735 454 aaPredicted RBP12.47□□□□□ -0.41
PRKCH-211ENST00000555082 NAP1L5Q96NT1 182 aaPredicted RBP12.47□□□□□ -0.41
PRKCH-211ENST00000555082 AHDC1Q5TGY3 1603 aaPredicted RBP12.46□□□□□ -0.41
PRKCH-211ENST00000555082 PCDHB15Q9Y5E8 787 aa12.46□□□□□ -0.41
PRKCH-211ENST00000555082 COL5A2P05997 1499 aaPredicted RBP12.46□□□□□ -0.41
PRKCH-211ENST00000555082 KCNQ3O43525 872 aa12.46□□□□□ -0.42
PRKCH-211ENST00000555082 XRCC6P12956 609 aaKnown RBP eCLIP12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms