RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 NFAT5O94916 1531 aa14.99□□□□□ -0.01
SRP54-205ENST00000554803 CARD11Q9BXL7 1154 aa14.99□□□□□ -0.01
SRP54-205ENST00000554803 KIF3CO14782 793 aa14.98□□□□□ -0.01
SRP54-205ENST00000554803 DNAJC5GQ8N7S2 189 aa14.98□□□□□ -0.01
SRP54-205ENST00000554803 KCNH5Q8NCM2 988 aa14.98□□□□□ -0.01
SRP54-205ENST00000554803 TFCP2L1Q9NZI6 479 aa14.98□□□□□ -0.01
SRP54-205ENST00000554803 LTN1O94822 1766 aa14.98□□□□□ -0.01
SRP54-205ENST00000554803 KTN1Q86UP2 1357 aaKnown RBP14.98□□□□□ -0.01
SRP54-205ENST00000554803 USP47Q96K76 1375 aa14.98□□□□□ -0.01
SRP54-205ENST00000554803 SRPK2P78362 688 aaKnown RBP14.97□□□□□ -0.01
SRP54-205ENST00000554803 DOT1LQ8TEK3 1739 aa14.97□□□□□ -0.01
SRP54-205ENST00000554803 ZBED9Q6R2W3 1325 aa14.96□□□□□ -0.01
SRP54-205ENST00000554803 HNRNPUQ00839 825 aaKnown RBP eCLIP14.95□□□□□ -0.02
SRP54-205ENST00000554803 CABP2Q9NPB3 220 aa14.95□□□□□ -0.02
SRP54-205ENST00000554803 PCNTO95613 3336 aa14.95□□□□□ -0.02
SRP54-205ENST00000554803 COL13A1Q5TAT6 717 aaPredicted RBP14.94□□□□□ -0.02
SRP54-205ENST00000554803 PRKRIP1Q9H875 184 aaPredicted RBP14.94□□□□□ -0.02
SRP54-205ENST00000554803 CABP1Q9NZU7 370 aa14.94□□□□□ -0.02
SRP54-205ENST00000554803 CD2APQ9Y5K6 639 aa14.94□□□□□ -0.02
SRP54-205ENST00000554803 TAF1LQ8IZX4 1826 aa14.94□□□□□ -0.02
SRP54-205ENST00000554803 USP54Q70EL1 1684 aa14.93□□□□□ -0.02
SRP54-205ENST00000554803 CAPN15O75808 1086 aa14.93□□□□□ -0.02
SRP54-205ENST00000554803 IL2RBP14784 551 aa14.93□□□□□ -0.02
SRP54-205ENST00000554803 ERBB3P21860 1342 aa14.92□□□□□ -0.02
SRP54-205ENST00000554803 CICQ96RK0 1608 aaPredicted RBP14.92□□□□□ -0.02
SRP54-205ENST00000554803 SOX12O15370 315 aa14.92□□□□□ -0.02
SRP54-205ENST00000554803 PRELPP51888 382 aa14.92□□□□□ -0.02
SRP54-205ENST00000554803 C5P01031 1676 aa14.92□□□□□ -0.02
SRP54-205ENST00000554803 KCNQ4P56696 695 aa14.91□□□□□ -0.02
SRP54-205ENST00000554803 COL23A1Q86Y22 540 aaPredicted RBP14.91□□□□□ -0.02
SRP54-205ENST00000554803 TTC21BQ7Z4L5 1316 aa14.91□□□□□ -0.02
SRP54-205ENST00000554803 FANCIQ9NVI1 1328 aa14.91□□□□□ -0.02
SRP54-205ENST00000554803 FAM208AQ9UK61 1670 aaKnown RBP14.9□□□□□ -0.02
SRP54-205ENST00000554803 PPP4R2Q9NY27 417 aa14.9□□□□□ -0.02
SRP54-205ENST00000554803 CENPJQ9HC77 1338 aaPredicted RBP14.9□□□□□ -0.02
SRP54-205ENST00000554803 MON2Q7Z3U7 1717 aa14.89□□□□□ -0.03
SRP54-205ENST00000554803 ST20-MTHFSA0A0A6YYL1 179 aa14.89□□□□□ -0.03
SRP54-205ENST00000554803 MSH5O43196 834 aa14.89□□□□□ -0.03
SRP54-205ENST00000554803 TOMM70O94826 608 aa14.89□□□□□ -0.03
SRP54-205ENST00000554803 MSL1Q68DK7 614 aa14.89□□□□□ -0.03
SRP54-205ENST00000554803 NLRP2Q9NX02 1062 aa14.89□□□□□ -0.03
SRP54-205ENST00000554803 TTC21AQ8NDW8 1320 aa14.89□□□□□ -0.03
SRP54-205ENST00000554803 TNS4Q8IZW8 715 aa14.88□□□□□ -0.03
SRP54-205ENST00000554803 JMYQ8N9B5 988 aa14.88□□□□□ -0.03
SRP54-205ENST00000554803 NSD2O96028 1365 aa14.87□□□□□ -0.03
SRP54-205ENST00000554803 ANKRD36BQ8N2N9 1353 aa14.87□□□□□ -0.03
SRP54-205ENST00000554803 RBM19Q9Y4C8 960 aaKnown RBP14.87□□□□□ -0.03
SRP54-205ENST00000554803 KLRG1Q96E93 195 aa14.86□□□□□ -0.03
SRP54-205ENST00000554803 ZNF692Q9BU19 519 aaPredicted RBP14.86□□□□□ -0.03
SRP54-205ENST00000554803 CCNL1Q9UK58 526 aaPredicted RBP14.86□□□□□ -0.03
SRP54-205ENST00000554803 KIF7Q2M1P5 1343 aa14.86□□□□□ -0.03
SRP54-205ENST00000554803 IGSF1Q8N6C5 1336 aa14.86□□□□□ -0.03
SRP54-205ENST00000554803 SMG6Q86US8 1419 aaKnown RBP14.85□□□□□ -0.03
SRP54-205ENST00000554803 UBR3Q6ZT12 1888 aa14.85□□□□□ -0.03
SRP54-205ENST00000554803 TOGARAM1Q9Y4F4 1720 aa14.84□□□□□ -0.03
SRP54-205ENST00000554803 DDX54Q8TDD1 881 aaKnown RBP14.84□□□□□ -0.03
SRP54-205ENST00000554803 SYTL4Q96C24 671 aaPredicted RBP14.84□□□□□ -0.03
SRP54-205ENST00000554803 TESK2Q96S53 571 aa14.84□□□□□ -0.03
SRP54-205ENST00000554803 KIF13BQ9NQT8 1826 aa14.84□□□□□ -0.03
SRP54-205ENST00000554803 PRIM1P49642 420 aaKnown RBP14.83□□□□□ -0.04
SRP54-205ENST00000554803 ANKRD24Q8TF21 1146 aa14.83□□□□□ -0.04
SRP54-205ENST00000554803 MRS2Q9HD23 443 aa14.83□□□□□ -0.04
SRP54-205ENST00000554803 INSRP06213 1382 aa14.83□□□□□ -0.04
SRP54-205ENST00000554803 KIAA1551Q9HCM1 1747 aa14.83□□□□□ -0.04
SRP54-205ENST00000554803 RGPD2P0DJD1 1756 aa14.83□□□□□ -0.04
SRP54-205ENST00000554803 FLAD1Q8NFF5 587 aa14.82□□□□□ -0.04
SRP54-205ENST00000554803 USP31Q70CQ4 1352 aa14.82□□□□□ -0.04
SRP54-205ENST00000554803 N4BP2Q86UW6 1770 aaPredicted RBP14.81□□□□□ -0.04
SRP54-205ENST00000554803 WWC3Q9ULE0 1092 aa14.81□□□□□ -0.04
SRP54-205ENST00000554803 C4BP0C0L5 1744 aa14.8□□□□□ -0.04
SRP54-205ENST00000554803 SLC34A2O95436 690 aa14.8□□□□□ -0.04
SRP54-205ENST00000554803 HTRA3P83110 453 aa14.8□□□□□ -0.04
SRP54-205ENST00000554803 RBM46Q8TBY0 533 aaKnown RBP14.8□□□□□ -0.04
SRP54-205ENST00000554803 BRCA1P38398 1863 aaKnown RBP14.8□□□□□ -0.04
SRP54-205ENST00000554803 PKD1L3Q7Z443 1732 aa14.79□□□□□ -0.04
SRP54-205ENST00000554803 EVC2Q86UK5 1308 aa14.79□□□□□ -0.04
SRP54-205ENST00000554803 SBNO2Q9Y2G9 1366 aa14.78□□□□□ -0.04
SRP54-205ENST00000554803 NMRK2Q9NPI5 230 aa14.78□□□□□ -0.04
SRP54-205ENST00000554803 ITGB4P16144 1822 aa14.78□□□□□ -0.04
SRP54-205ENST00000554803 ARFGEF1Q9Y6D6 1849 aa14.78□□□□□ -0.04
SRP54-205ENST00000554803 RNF123Q5XPI4 1314 aa14.77□□□□□ -0.04
SRP54-205ENST00000554803 HMGB2P26583 209 aaKnown RBP14.76□□□□□ -0.05
SRP54-205ENST00000554803 FSTL1Q12841 308 aa14.76□□□□□ -0.05
SRP54-205ENST00000554803 RALBP1Q15311 655 aa14.76□□□□□ -0.05
SRP54-205ENST00000554803 TNRC6CQ9HCJ0 1690 aaKnown RBP14.76□□□□□ -0.05
SRP54-205ENST00000554803 POLR3GLQ9BT43 218 aa14.75□□□□□ -0.05
SRP54-205ENST00000554803 TMF1P82094 1093 aa14.74□□□□□ -0.05
SRP54-205ENST00000554803 SBF1O95248 1867 aa14.74□□□□□ -0.05
SRP54-205ENST00000554803 MEGF6O75095 1541 aa14.73□□□□□ -0.05
SRP54-205ENST00000554803 C16orf71Q8IYS4 520 aaPredicted RBP14.73□□□□□ -0.05
SRP54-205ENST00000554803 ZCRB1Q8TBF4 217 aaKnown RBP14.73□□□□□ -0.05
SRP54-205ENST00000554803 NUDCQ9Y266 331 aa14.73□□□□□ -0.05
SRP54-205ENST00000554803 PXDNLA1KZ92 1463 aa14.73□□□□□ -0.05
SRP54-205ENST00000554803 MAP2P11137 1827 aaKnown RBP14.73□□□□□ -0.05
SRP54-205ENST00000554803 NME9Q86XW9 330 aa14.72□□□□□ -0.05
SRP54-205ENST00000554803 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.72□□□□□ -0.05
SRP54-205ENST00000554803 C10orf71Q711Q0 1435 aa14.72□□□□□ -0.05
SRP54-205ENST00000554803 NSD3Q9BZ95 1437 aa14.72□□□□□ -0.05
SRP54-205ENST00000554803 PLEKHG2Q9H7P9 1386 aa14.72□□□□□ -0.05
SRP54-205ENST00000554803 AMIGO3Q86WK7 504 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms