RNA–Protein interactions for RNA: ENST00000553970.1

SEC23A-206, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-206ENST00000553970 FYB1O15117 783 aa24.01■■□□□ 1.43
SEC23A-206ENST00000553970 RAPGEF4Q8WZA2 1011 aa24.01■■□□□ 1.43
SEC23A-206ENST00000553970 LRRC4BQ9NT99 713 aa24.01■■□□□ 1.43
SEC23A-206ENST00000553970 PRIM1P49642 420 aaKnown RBP24■■□□□ 1.43
SEC23A-206ENST00000553970 POLD1P28340 1107 aa23.99■■□□□ 1.43
SEC23A-206ENST00000553970 ZNF827Q17R98 1081 aa23.99■■□□□ 1.43
SEC23A-206ENST00000553970 AKT1S1Q96B36 256 aa23.99■■□□□ 1.43
SEC23A-206ENST00000553970 UTRNP46939 3433 aa23.98■■□□□ 1.43
SEC23A-206ENST00000553970 DOT1LQ8TEK3 1739 aa23.98■■□□□ 1.43
SEC23A-206ENST00000553970 RRS1Q15050 365 aaKnown RBP23.98■■□□□ 1.43
SEC23A-206ENST00000553970 GGNBP2Q9H3C7 697 aa23.98■■□□□ 1.43
SEC23A-206ENST00000553970 TFCP2L1Q9NZI6 479 aa23.98■■□□□ 1.43
SEC23A-206ENST00000553970 FLT4P35916 1363 aa23.98■■□□□ 1.43
SEC23A-206ENST00000553970 MEGF6O75095 1541 aa23.97■■□□□ 1.43
SEC23A-206ENST00000553970 TIMELESSQ9UNS1 1208 aa23.97■■□□□ 1.43
SEC23A-206ENST00000553970 KIF20BQ96Q89 1820 aa23.96■■□□□ 1.43
SEC23A-206ENST00000553970 INSRP06213 1382 aa23.96■■□□□ 1.43
SEC23A-206ENST00000553970 TATP17735 454 aaPredicted RBP23.96■■□□□ 1.43
SEC23A-206ENST00000553970 RGPD2P0DJD1 1756 aa23.96■■□□□ 1.43
SEC23A-206ENST00000553970 NBPF6Q5VWK0 638 aa23.95■■□□□ 1.42
SEC23A-206ENST00000553970 NBPF4Q96M43 638 aa23.95■■□□□ 1.42
SEC23A-206ENST00000553970 LY75O60449 1722 aa23.95■■□□□ 1.42
SEC23A-206ENST00000553970 PCDH11XQ9BZA7 1347 aa23.94■■□□□ 1.42
SEC23A-206ENST00000553970 PCDH11YQ9BZA8 1340 aa23.94■■□□□ 1.42
SEC23A-206ENST00000553970 SHANK3Q9BYB0 1731 aa23.94■■□□□ 1.42
SEC23A-206ENST00000553970 FBLN1P23142 703 aa23.94■■□□□ 1.42
SEC23A-206ENST00000553970 CCNL1Q9UK58 526 aaPredicted RBP23.93■■□□□ 1.42
SEC23A-206ENST00000553970 NSD2O96028 1365 aa23.92■■□□□ 1.42
SEC23A-206ENST00000553970 PNPLA7Q6ZV29 1317 aa23.91■■□□□ 1.42
SEC23A-206ENST00000553970 CHD4Q14839 1912 aa23.9■■□□□ 1.42
SEC23A-206ENST00000553970 CLSPNQ9HAW4 1339 aa23.89■■□□□ 1.42
SEC23A-206ENST00000553970 HSP90AB2PQ58FF8 381 aa23.89■■□□□ 1.41
SEC23A-206ENST00000553970 USHBP1Q8N6Y0 703 aa23.88■■□□□ 1.41
SEC23A-206ENST00000553970 COL24A1Q17RW2 1714 aa23.87■■□□□ 1.41
SEC23A-206ENST00000553970 NSD3Q9BZ95 1437 aa23.86■■□□□ 1.41
SEC23A-206ENST00000553970 GPR162Q16538 588 aa23.86■■□□□ 1.41
SEC23A-206ENST00000553970 FLAD1Q8NFF5 587 aa23.86■■□□□ 1.41
SEC23A-206ENST00000553970 TUBGCP6Q96RT7 1819 aa23.85■■□□□ 1.41
SEC23A-206ENST00000553970 ZNF784Q8NCA9 323 aaPredicted RBP23.85■■□□□ 1.41
SEC23A-206ENST00000553970 KLHL34Q8N239 644 aa23.84■■□□□ 1.41
SEC23A-206ENST00000553970 SMARCC1Q92922 1105 aaPredicted RBP23.84■■□□□ 1.41
SEC23A-206ENST00000553970 MSH5O43196 834 aa23.83■■□□□ 1.41
SEC23A-206ENST00000553970 KCNQ4P56696 695 aa23.83■■□□□ 1.41
SEC23A-206ENST00000553970 SPG7Q9UQ90 795 aa23.82■■□□□ 1.4
SEC23A-206ENST00000553970 PALLDQ8WX93 1383 aa23.81■■□□□ 1.4
SEC23A-206ENST00000553970 CARD14Q9BXL6 1004 aa23.81■■□□□ 1.4
SEC23A-206ENST00000553970 C5P01031 1676 aa23.8■■□□□ 1.4
SEC23A-206ENST00000553970 PPM1GO15355 546 aaPredicted RBP23.8■■□□□ 1.4
SEC23A-206ENST00000553970 ANKRD26Q9UPS8 1709 aa23.8■■□□□ 1.4
SEC23A-206ENST00000553970 EMILIN1Q9Y6C2 1016 aa23.8■■□□□ 1.4
SEC23A-206ENST00000553970 WASHC2AQ641Q2 1341 aa23.8■■□□□ 1.4
SEC23A-206ENST00000553970 GOLGB1Q14789 3259 aaKnown RBP23.79■■□□□ 1.4
SEC23A-206ENST00000553970 PKD1L3Q7Z443 1732 aa23.79■■□□□ 1.4
SEC23A-206ENST00000553970 NCAPD2Q15021 1401 aa23.79■■□□□ 1.4
SEC23A-206ENST00000553970 MPRIPQ6WCQ1 1025 aa23.79■■□□□ 1.4
SEC23A-206ENST00000553970 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.79■■□□□ 1.44e-14■□□□□ 10.9
SEC23A-206ENST00000553970 PLEKHG2Q9H7P9 1386 aa23.78■■□□□ 1.4
SEC23A-206ENST00000553970 CYP27B1O15528 508 aa23.78■■□□□ 1.4
SEC23A-206ENST00000553970 COL23A1Q86Y22 540 aaPredicted RBP23.77■■□□□ 1.4
SEC23A-206ENST00000553970 GRIN3BO60391 1043 aa23.76■■□□□ 1.39
SEC23A-206ENST00000553970 PELP1Q8IZL8 1130 aaKnown RBP23.76■■□□□ 1.39
SEC23A-206ENST00000553970 NKX1-1Q15270 411 aaPredicted RBP23.75■■□□□ 1.39
SEC23A-206ENST00000553970 AK7Q96M32 723 aa23.75■■□□□ 1.39
SEC23A-206ENST00000553970 TAF1LQ8IZX4 1826 aa23.74■■□□□ 1.39
SEC23A-206ENST00000553970 MAP2P11137 1827 aaKnown RBP23.73■■□□□ 1.39
SEC23A-206ENST00000553970 ITGB4P16144 1822 aa23.73■■□□□ 1.39
SEC23A-206ENST00000553970 C4BP0C0L5 1744 aa23.71■■□□□ 1.39
SEC23A-206ENST00000553970 IFNL2Q8IZJ0 200 aa23.71■■□□□ 1.39
SEC23A-206ENST00000553970 TMOD3Q9NYL9 352 aa23.71■■□□□ 1.39
SEC23A-206ENST00000553970 CD2APQ9Y5K6 639 aa23.71■■□□□ 1.39
SEC23A-206ENST00000553970 TOGARAM1Q9Y4F4 1720 aa23.7■■□□□ 1.39
SEC23A-206ENST00000553970 NLGN2Q8NFZ4 835 aa23.7■■□□□ 1.38
SEC23A-206ENST00000553970 EYA1Q99502 592 aa23.7■■□□□ 1.38
SEC23A-206ENST00000553970 POLKQ9UBT6 870 aa23.7■■□□□ 1.38
SEC23A-206ENST00000553970 PIGBQ92521 554 aa23.69■■□□□ 1.38
SEC23A-206ENST00000553970 POLR3GLQ9BT43 218 aa23.69■■□□□ 1.38
SEC23A-206ENST00000553970 SSFA2P28290 1259 aa23.68■■□□□ 1.38
SEC23A-206ENST00000553970 EIF4G2P78344 907 aaKnown RBP eCLIP23.68■■□□□ 1.38
SEC23A-206ENST00000553970 MSL1Q68DK7 614 aa23.68■■□□□ 1.38
SEC23A-206ENST00000553970 LOC102724428A0A0B4J2F2 783 aa23.66■■□□□ 1.38
SEC23A-206ENST00000553970 SIK1P57059 783 aa23.66■■□□□ 1.38
SEC23A-206ENST00000553970 PCGF6Q9BYE7 350 aa23.66■■□□□ 1.38
SEC23A-206ENST00000553970 HSP90AB1P08238 724 aaKnown RBP23.65■■□□□ 1.38
SEC23A-206ENST00000553970 PHKG2P15735 406 aa23.65■■□□□ 1.38
SEC23A-206ENST00000553970 C1QTNF8P60827 252 aa23.64■■□□□ 1.37
SEC23A-206ENST00000553970 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.63■■□□□ 1.37
SEC23A-206ENST00000553970 GIGYF1O75420 1035 aaPredicted RBP23.63■■□□□ 1.37
SEC23A-206ENST00000553970 EIF4A2Q14240 407 aaKnown RBP23.63■■□□□ 1.37
SEC23A-206ENST00000553970 UBR3Q6ZT12 1888 aa23.63■■□□□ 1.37
SEC23A-206ENST00000553970 TNNT2P45379 298 aaPredicted RBP23.62■■□□□ 1.37
SEC23A-206ENST00000553970 PHF14O94880 888 aa23.61■■□□□ 1.37
SEC23A-206ENST00000553970 YBX3P16989 372 aaKnown RBP eCLIP23.61■■□□□ 1.377e-8■□□□□ 8.2
SEC23A-206ENST00000553970 ATP6V1AP38606 617 aa23.61■■□□□ 1.37
SEC23A-206ENST00000553970 IGSF1Q8N6C5 1336 aa23.6■■□□□ 1.37
SEC23A-206ENST00000553970 ERVV-2B6SEH9 535 aa23.6■■□□□ 1.37
SEC23A-206ENST00000553970 AMOTQ4VCS5 1084 aa23.59■■□□□ 1.37
SEC23A-206ENST00000553970 PLEKHO1Q53GL0 409 aaPredicted RBP23.59■■□□□ 1.37
SEC23A-206ENST00000553970 DCAF5Q96JK2 942 aa23.59■■□□□ 1.37
SEC23A-206ENST00000553970 SENP3-EIF4A1A0A087X0R7 540 aa23.58■■□□□ 1.37
SEC23A-206ENST00000553970 GNPATO15228 680 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms