RNA–Protein interactions for RNA: ENST00000552495.1

RITA1-203, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

TSL 2 BASIC

Gene RITA1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-203ENST00000552495 KIAA0232Q92628 1395 aa29.74■■■□□ 2.35
RITA1-203ENST00000552495 PDE4AP27815 886 aa29.74■■■□□ 2.35
RITA1-203ENST00000552495 LMOD2Q6P5Q4 547 aa29.73■■■□□ 2.35
RITA1-203ENST00000552495 CADPS2Q86UW7 1296 aa29.73■■■□□ 2.35
RITA1-203ENST00000552495 USP19O94966 1318 aa29.73■■■□□ 2.35
RITA1-203ENST00000552495 SKAP1Q86WV1 359 aa29.72■■■□□ 2.35
RITA1-203ENST00000552495 RWDD1Q9H446 243 aaPredicted RBP29.72■■■□□ 2.35
RITA1-203ENST00000552495 TMEM57Q8N5G2 664 aa29.72■■■□□ 2.35
RITA1-203ENST00000552495 BACH2Q9BYV9 841 aa29.71■■■□□ 2.35
RITA1-203ENST00000552495 GNAT3A8MTJ3 354 aa29.7■■■□□ 2.35
RITA1-203ENST00000552495 ARHGEF25Q86VW2 580 aa29.7■■■□□ 2.35
RITA1-203ENST00000552495 KDM4FA0A1W2PPD8 638 aa29.68■■■□□ 2.34
RITA1-203ENST00000552495 ZBTB7CA1YPR0 619 aa29.68■■■□□ 2.34
RITA1-203ENST00000552495 CHMP4BQ9H444 224 aaKnown RBP29.68■■■□□ 2.34
RITA1-203ENST00000552495 MSH6P52701 1360 aa29.68■■■□□ 2.34
RITA1-203ENST00000552495 LMTK3Q96Q04 1460 aa29.68■■■□□ 2.34
RITA1-203ENST00000552495 MAP3K5Q99683 1374 aa29.65■■■□□ 2.34
RITA1-203ENST00000552495 NBPF6Q5VWK0 638 aa29.65■■■□□ 2.34
RITA1-203ENST00000552495 NBPF4Q96M43 638 aa29.65■■■□□ 2.34
RITA1-203ENST00000552495 API5Q9BZZ5 524 aaKnown RBP29.65■■■□□ 2.34
RITA1-203ENST00000552495 TSPYL4Q9UJ04 414 aa29.65■■■□□ 2.34
RITA1-203ENST00000552495 ALS2Q96Q42 1657 aa29.64■■■□□ 2.34
RITA1-203ENST00000552495 USHBP1Q8N6Y0 703 aa29.63■■■□□ 2.33
RITA1-203ENST00000552495 ZBTB40Q9NUA8 1239 aa29.63■■■□□ 2.33
RITA1-203ENST00000552495 NPHP3Q7Z494 1330 aa29.63■■■□□ 2.33
RITA1-203ENST00000552495 RGS3P49796 1198 aa29.63■■■□□ 2.33
RITA1-203ENST00000552495 LRRC37A3O60309 1634 aa29.63■■■□□ 2.33
RITA1-203ENST00000552495 ABCC4O15439 1325 aa29.61■■■□□ 2.33
RITA1-203ENST00000552495 HDAC1Q13547 482 aaPredicted RBP29.61■■■□□ 2.33
RITA1-203ENST00000552495 ANP32AP39687 249 aaKnown RBP29.6■■■□□ 2.33
RITA1-203ENST00000552495 BABAM1Q9NWV8 329 aa29.6■■■□□ 2.33
RITA1-203ENST00000552495 STRCQ7RTU9 1775 aa29.6■■■□□ 2.33
RITA1-203ENST00000552495 KRT24Q2M2I5 525 aa29.59■■■□□ 2.33
RITA1-203ENST00000552495 MIS18AQ9NYP9 233 aa29.59■■■□□ 2.33
RITA1-203ENST00000552495 PLEKHG5O94827 1062 aa29.58■■■□□ 2.33
RITA1-203ENST00000552495 FAM161AQ3B820 660 aa29.57■■■□□ 2.32
RITA1-203ENST00000552495 ANKRD24Q8TF21 1146 aa29.57■■■□□ 2.32
RITA1-203ENST00000552495 IL17REQ8NFR9 667 aa29.56■■■□□ 2.32
RITA1-203ENST00000552495 NCAPD2Q15021 1401 aa29.56■■■□□ 2.32
RITA1-203ENST00000552495 LRRC59Q96AG4 307 aaKnown RBP29.55■■■□□ 2.32
RITA1-203ENST00000552495 ZBTB7BO15156 539 aaPredicted RBP29.55■■■□□ 2.32
RITA1-203ENST00000552495 MED1Q15648 1581 aaPredicted RBP29.54■■■□□ 2.32
RITA1-203ENST00000552495 TAF7Q15545 349 aaPredicted RBP29.54■■■□□ 2.32
RITA1-203ENST00000552495 PTPRCP08575 1304 aa29.54■■■□□ 2.32
RITA1-203ENST00000552495 RGPD2P0DJD1 1756 aa29.54■■■□□ 2.32
RITA1-203ENST00000552495 XIRP1Q702N8 1843 aaKnown RBP29.54■■■□□ 2.32
RITA1-203ENST00000552495 AMOTQ4VCS5 1084 aa29.53■■■□□ 2.32
RITA1-203ENST00000552495 PLEKHO1Q53GL0 409 aaPredicted RBP29.53■■■□□ 2.32
RITA1-203ENST00000552495 SOS1Q07889 1333 aaPredicted RBP29.53■■■□□ 2.32
RITA1-203ENST00000552495 TNS3Q68CZ2 1445 aa29.53■■■□□ 2.32
RITA1-203ENST00000552495 PDZRN3Q9UPQ7 1066 aa29.53■■■□□ 2.32
RITA1-203ENST00000552495 DDX17Q92841 729 aaKnown RBP29.52■■■□□ 2.32
RITA1-203ENST00000552495 AXIN2Q9Y2T1 843 aa29.51■■■□□ 2.31
RITA1-203ENST00000552495 CAMTA1Q9Y6Y1 1673 aa29.5■■■□□ 2.31
RITA1-203ENST00000552495 ZC3H6P61129 1189 aaKnown RBP29.5■■■□□ 2.31
RITA1-203ENST00000552495 CEMIPQ8WUJ3 1361 aa29.5■■■□□ 2.31
RITA1-203ENST00000552495 PXDNQ92626 1479 aa29.5■■■□□ 2.31
RITA1-203ENST00000552495 AKAP4Q5JQC9 854 aa29.49■■■□□ 2.31
RITA1-203ENST00000552495 C8orf34Q49A92 452 aa29.48■■■□□ 2.31
RITA1-203ENST00000552495 ERBB3P21860 1342 aa29.47■■■□□ 2.31
RITA1-203ENST00000552495 SPATA31A3Q5VYP0 1347 aa29.47■■■□□ 2.31
RITA1-203ENST00000552495 MSH5O43196 834 aa29.47■■■□□ 2.31
RITA1-203ENST00000552495 SLC4A2P04920 1241 aa29.47■■■□□ 2.31
RITA1-203ENST00000552495 INTS3Q68E01 1043 aaKnown RBP29.47■■■□□ 2.31
RITA1-203ENST00000552495 ZNF530Q6P9A1 599 aaPredicted RBP29.46■■■□□ 2.31
RITA1-203ENST00000552495 SMC5Q8IY18 1101 aa29.46■■■□□ 2.31
RITA1-203ENST00000552495 LMO7Q8WWI1 1683 aa29.45■■■□□ 2.31
RITA1-203ENST00000552495 ZNF335Q9H4Z2 1342 aaPredicted RBP29.45■■■□□ 2.3
RITA1-203ENST00000552495 BRINP3Q76B58 766 aa29.44■■■□□ 2.3
RITA1-203ENST00000552495 STK31Q9BXU1 1019 aa29.44■■■□□ 2.3
RITA1-203ENST00000552495 CCDC30Q5VVM6 783 aa29.44■■■□□ 2.3
RITA1-203ENST00000552495 RGS12O14924 1447 aa29.44■■■□□ 2.3
RITA1-203ENST00000552495 C1orf141Q5JVX7 400 aa29.43■■■□□ 2.3
RITA1-203ENST00000552495 IPO9Q96P70 1041 aaKnown RBP29.43■■■□□ 2.3
RITA1-203ENST00000552495 RGPD5Q99666 1765 aa29.42■■■□□ 2.3
RITA1-203ENST00000552495 ABCC6O95255 1503 aa29.42■■■□□ 2.3
RITA1-203ENST00000552495 NPM2Q86SE8 214 aaKnown RBP29.41■■■□□ 2.3
RITA1-203ENST00000552495 LGR6Q9HBX8 967 aa29.4■■■□□ 2.3
RITA1-203ENST00000552495 SLAIN2Q9P270 581 aa29.4■■■□□ 2.3
RITA1-203ENST00000552495 OVOS2A0A0G2JMS6 1433 aa29.39■■■□□ 2.3
RITA1-203ENST00000552495 TEFQ10587 303 aa29.39■■■□□ 2.3
RITA1-203ENST00000552495 CABLES1Q8TDN4 633 aa29.38■■■□□ 2.29
RITA1-203ENST00000552495 GCC1Q96CN9 775 aa29.38■■■□□ 2.29
RITA1-203ENST00000552495 CHMP4AQ9BY43 222 aa29.38■■■□□ 2.29
RITA1-203ENST00000552495 COL18A1P39060 1754 aa29.37■■■□□ 2.29
RITA1-203ENST00000552495 CPDO75976 1380 aa29.36■■■□□ 2.29
RITA1-203ENST00000552495 C1orf115Q9H7X2 142 aa29.36■■■□□ 2.29
RITA1-203ENST00000552495 CRYBG1Q9Y4K1 1723 aa29.36■■■□□ 2.29
RITA1-203ENST00000552495 RAPGEF4Q8WZA2 1011 aa29.36■■■□□ 2.29
RITA1-203ENST00000552495 NLRP2Q9NX02 1062 aa29.36■■■□□ 2.29
RITA1-203ENST00000552495 RNMTO43148 476 aaKnown RBP29.35■■■□□ 2.29
RITA1-203ENST00000552495 MPRIPQ6WCQ1 1025 aa29.35■■■□□ 2.29
RITA1-203ENST00000552495 ERICH6Q7L0X2 663 aa29.35■■■□□ 2.29
RITA1-203ENST00000552495 FAM208AQ9UK61 1670 aaKnown RBP29.35■■■□□ 2.29
RITA1-203ENST00000552495 CACNA1FO60840 1977 aa29.35■■■□□ 2.29
RITA1-203ENST00000552495 VIRMAQ69YN4 1812 aaKnown RBP29.35■■■□□ 2.29
RITA1-203ENST00000552495 NUCB1Q02818 461 aa29.34■■■□□ 2.29
RITA1-203ENST00000552495 G2E3Q7L622 706 aa29.34■■■□□ 2.29
RITA1-203ENST00000552495 SOS2Q07890 1332 aaPredicted RBP29.33■■■□□ 2.29
RITA1-203ENST00000552495 KDM3BQ7LBC6 1761 aa29.33■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms