RNA–Protein interactions for RNA: ENST00000551765.5

GATC-203, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GATC, Length 4,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-203ENST00000551765 ZBTB40Q9NUA8 1239 aa16.11■□□□□ 0.17
GATC-203ENST00000551765 BECN2A8MW95 431 aa16.1■□□□□ 0.17
GATC-203ENST00000551765 MRPL50Q8N5N7 158 aaKnown RBP16.1■□□□□ 0.17
GATC-203ENST00000551765 FERMT3Q86UX7 667 aa16.1■□□□□ 0.17
GATC-203ENST00000551765 TTC21BQ7Z4L5 1316 aa16.09■□□□□ 0.17
GATC-203ENST00000551765 PTCD1O75127 700 aaKnown RBP16.09■□□□□ 0.17
GATC-203ENST00000551765 R3HCC1Q9Y3T6 440 aaKnown RBP16.09■□□□□ 0.17
GATC-203ENST00000551765 UGGT1Q9NYU2 1555 aa16.09■□□□□ 0.17
GATC-203ENST00000551765 CPLX1O14810 134 aa16.09■□□□□ 0.17
GATC-203ENST00000551765 PLA2R1Q13018 1463 aa16.09■□□□□ 0.17
GATC-203ENST00000551765 SPG7Q9UQ90 795 aa16.08■□□□□ 0.17
GATC-203ENST00000551765 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.08■□□□□ 0.16
GATC-203ENST00000551765 PPIP5K1Q6PFW1 1433 aa16.08■□□□□ 0.16
GATC-203ENST00000551765 JAKMIP1Q96N16 626 aaKnown RBP16.08■□□□□ 0.16
GATC-203ENST00000551765 PANK2Q9BZ23 570 aa16.08■□□□□ 0.16
GATC-203ENST00000551765 PHF8Q9UPP1 1060 aa16.08■□□□□ 0.16
GATC-203ENST00000551765 SDSP20132 328 aa16.08■□□□□ 0.16
GATC-203ENST00000551765 OTUD7AQ8TE49 926 aaPredicted RBP16.08■□□□□ 0.16
GATC-203ENST00000551765 CCDC8Q9H0W5 538 aaPredicted RBP16.08■□□□□ 0.16
GATC-203ENST00000551765 PI4KAP2A4QPH2 592 aa16.08■□□□□ 0.16
GATC-203ENST00000551765 GOLGA6L19H0YKK7 550 aa16.08■□□□□ 0.16
GATC-203ENST00000551765 PI4KAP1Q8N8J0 262 aa16.08■□□□□ 0.16
GATC-203ENST00000551765 ZNF592Q92610 1267 aa16.08■□□□□ 0.16
GATC-203ENST00000551765 TATP17735 454 aaPredicted RBP16.07■□□□□ 0.16
GATC-203ENST00000551765 BOLA2Q9H3K6 86 aa16.07■□□□□ 0.16
GATC-203ENST00000551765 KDM5CP41229 1560 aa16.07■□□□□ 0.16
GATC-203ENST00000551765 PTPRTO14522 1441 aa16.07■□□□□ 0.16
GATC-203ENST00000551765 IL16Q14005 1332 aa16.07■□□□□ 0.16
GATC-203ENST00000551765 SYCE3A1L190 88 aa16.07■□□□□ 0.16
GATC-203ENST00000551765 MTHFSDQ2M296 383 aaKnown RBP16.07■□□□□ 0.16
GATC-203ENST00000551765 KIF3AQ9Y496 699 aa16.07■□□□□ 0.16
GATC-203ENST00000551765 STK11IPQ8N1F8 1099 aa16.06■□□□□ 0.16
GATC-203ENST00000551765 EIF2AK4Q9P2K8 1649 aaKnown RBP16.06■□□□□ 0.16
GATC-203ENST00000551765 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.06■□□□□ 0.16
GATC-203ENST00000551765 PPFIA3O75145 1194 aa16.06■□□□□ 0.16
GATC-203ENST00000551765 ZMYM4Q5VZL5 1548 aa16.06■□□□□ 0.16
GATC-203ENST00000551765 BLMP54132 1417 aaPredicted RBP16.05■□□□□ 0.16
GATC-203ENST00000551765 DTNBO60941 627 aa16.05■□□□□ 0.16
GATC-203ENST00000551765 PIP4K2AP48426 406 aaPredicted RBP16.05■□□□□ 0.16
GATC-203ENST00000551765 TOM1L2Q6ZVM7 507 aa16.05■□□□□ 0.16
GATC-203ENST00000551765 MAST1Q9Y2H9 1570 aa16.05■□□□□ 0.16
GATC-203ENST00000551765 KAT6BQ8WYB5 2073 aa16.05■□□□□ 0.16
GATC-203ENST00000551765 CASTP20810 708 aaKnown RBP16.05■□□□□ 0.16
GATC-203ENST00000551765 CABP4P57796 275 aa16.05■□□□□ 0.16
GATC-203ENST00000551765 G2E3Q7L622 706 aa16.05■□□□□ 0.16
GATC-203ENST00000551765 SMC5Q8IY18 1101 aa16.05■□□□□ 0.16
GATC-203ENST00000551765 PPP1R42Q7Z4L9 355 aa16.05■□□□□ 0.16
GATC-203ENST00000551765 TTC22Q5TAA0 569 aa16.04■□□□□ 0.16
GATC-203ENST00000551765 SAMD9LQ8IVG5 1584 aa16.04■□□□□ 0.16
GATC-203ENST00000551765 PRPF40BQ6NWY9 871 aaKnown RBP16.04■□□□□ 0.16
GATC-203ENST00000551765 CIZ1Q9ULV3 898 aaPredicted RBP16.04■□□□□ 0.16
GATC-203ENST00000551765 CYP46A1Q9Y6A2 500 aa16.04■□□□□ 0.16
GATC-203ENST00000551765 SPC24Q8NBT2 197 aa16.04■□□□□ 0.16
GATC-203ENST00000551765 ATP7AQ04656 1500 aa16.03■□□□□ 0.16
GATC-203ENST00000551765 MCM2P49736 904 aa16.03■□□□□ 0.16
GATC-203ENST00000551765 CCDC83Q8IWF9 413 aa16.03■□□□□ 0.16
GATC-203ENST00000551765 LRRC59Q96AG4 307 aaKnown RBP16.03■□□□□ 0.16
GATC-203ENST00000551765 CWC22Q9HCG8 908 aaKnown RBP16.03■□□□□ 0.16
GATC-203ENST00000551765 DNAAF4Q8WXU2 420 aa16.03■□□□□ 0.16
GATC-203ENST00000551765 PRDM11Q9NQV5 511 aa16.03■□□□□ 0.16
GATC-203ENST00000551765 ATP10AO60312 1499 aa16.02■□□□□ 0.16
GATC-203ENST00000551765 ESPNB1AK53 854 aa16.02■□□□□ 0.16
GATC-203ENST00000551765 ZBTB7BO15156 539 aaPredicted RBP16.02■□□□□ 0.16
GATC-203ENST00000551765 KIF1BPQ96EK5 621 aa16.02■□□□□ 0.16
GATC-203ENST00000551765 YTHDC2Q9H6S0 1430 aaKnown RBP16.02■□□□□ 0.16
GATC-203ENST00000551765 RIMS2Q9UQ26 1411 aa16.02■□□□□ 0.16
GATC-203ENST00000551765 BCORL1Q5H9F3 1711 aa16.02■□□□□ 0.16
GATC-203ENST00000551765 MBD3O95983 291 aa16.02■□□□□ 0.16
GATC-203ENST00000551765 ATP2B1P20020 1258 aa16.02■□□□□ 0.16
GATC-203ENST00000551765 DDX11Q96FC9 970 aa16.02■□□□□ 0.16
GATC-203ENST00000551765 RBM27Q9P2N5 1060 aaKnown RBP16.02■□□□□ 0.16
GATC-203ENST00000551765 FKBP4Q02790 459 aaKnown RBP eCLIP16.02■□□□□ 0.15
GATC-203ENST00000551765 VSIG10Q8N0Z9 540 aa16.02■□□□□ 0.15
GATC-203ENST00000551765 RASSF8Q8NHQ8 419 aa16.02■□□□□ 0.15
GATC-203ENST00000551765 FMNL2Q96PY5 1086 aa16.02■□□□□ 0.15
GATC-203ENST00000551765 LARP1BQ659C4 914 aaKnown RBP16.02■□□□□ 0.15
GATC-203ENST00000551765 NPATQ14207 1427 aa16.01■□□□□ 0.15
GATC-203ENST00000551765 CHRNA2Q15822 529 aa16.01■□□□□ 0.15
GATC-203ENST00000551765 TCEANC2Q96MN5 208 aa16.01■□□□□ 0.15
GATC-203ENST00000551765 CDK11BP21127 795 aaKnown RBP16.01■□□□□ 0.15
GATC-203ENST00000551765 TRDNQ13061 729 aa16.01■□□□□ 0.15
GATC-203ENST00000551765 NFXL1Q6ZNB6 911 aa16.01■□□□□ 0.15
GATC-203ENST00000551765 EYA1Q99502 592 aa16.01■□□□□ 0.15
GATC-203ENST00000551765 ABCA8O94911 1581 aa16.01■□□□□ 0.15
GATC-203ENST00000551765 RBM10P98175 930 aaKnown RBP16.01■□□□□ 0.15
GATC-203ENST00000551765 SLC39A6Q13433 755 aa16.01■□□□□ 0.15
GATC-203ENST00000551765 RALYLQ86SE5 291 aaKnown RBP16.01■□□□□ 0.15
GATC-203ENST00000551765 ANKRD44Q8N8A2 993 aa16.01■□□□□ 0.15
GATC-203ENST00000551765 NPC1L1Q9UHC9 1359 aa16■□□□□ 0.15
GATC-203ENST00000551765 ATP5J2-PTCD1G3V325 749 aa16■□□□□ 0.15
GATC-203ENST00000551765 ARHGAP45Q92619 1136 aa16■□□□□ 0.15
GATC-203ENST00000551765 CHPF2Q9P2E5 772 aa16■□□□□ 0.15
GATC-203ENST00000551765 MAP3K19Q56UN5 1328 aa16■□□□□ 0.15
GATC-203ENST00000551765 PSMA5P28066 241 aa16■□□□□ 0.15
GATC-203ENST00000551765 MYD88Q99836 296 aa16■□□□□ 0.15
GATC-203ENST00000551765 SASS6Q6UVJ0 657 aa16■□□□□ 0.15
GATC-203ENST00000551765 TSPY26PQ9H489 355 aa16■□□□□ 0.15
GATC-203ENST00000551765 PDRG1Q9NUG6 133 aa16■□□□□ 0.15
GATC-203ENST00000551765 PDE1AP54750 535 aa15.99■□□□□ 0.15
GATC-203ENST00000551765 ADGBQ8N7X0 1667 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms