RNA–Protein interactions for RNA: ENST00000550455.5

CCT2-209, Transcript of chaperonin containing TCP1 subunit 2, humanhuman

TSL 2

Gene CCT2, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT2-209ENST00000550455 PNPLA7Q6ZV29 1317 aa14.49□□□□□ -0.09
CCT2-209ENST00000550455 PRIM1P49642 420 aaKnown RBP14.49□□□□□ -0.09
CCT2-209ENST00000550455 LY75O60449 1722 aa14.49□□□□□ -0.09
CCT2-209ENST00000550455 NSD2O96028 1365 aa14.48□□□□□ -0.09
CCT2-209ENST00000550455 LTV1Q96GA3 475 aaPredicted RBP14.48□□□□□ -0.09
CCT2-209ENST00000550455 TFCP2L1Q9NZI6 479 aa14.48□□□□□ -0.09
CCT2-209ENST00000550455 KAT6BQ8WYB5 2073 aa14.47□□□□□ -0.09
CCT2-209ENST00000550455 CDCA8Q53HL2 280 aa14.47□□□□□ -0.09
CCT2-209ENST00000550455 SYTL4Q96C24 671 aaPredicted RBP14.47□□□□□ -0.09
CCT2-209ENST00000550455 SMG6Q86US8 1419 aaKnown RBP14.47□□□□□ -0.09
CCT2-209ENST00000550455 FYB1O15117 783 aa14.46□□□□□ -0.09
CCT2-209ENST00000550455 TMF1P82094 1093 aa14.46□□□□□ -0.09
CCT2-209ENST00000550455 USP47Q96K76 1375 aa14.46□□□□□ -0.1
CCT2-209ENST00000550455 MEGF6O75095 1541 aa14.46□□□□□ -0.1
CCT2-209ENST00000550455 GPR162Q16538 588 aa14.45□□□□□ -0.1
CCT2-209ENST00000550455 NBPF6Q5VWK0 638 aa14.45□□□□□ -0.1
CCT2-209ENST00000550455 FLAD1Q8NFF5 587 aa14.45□□□□□ -0.1
CCT2-209ENST00000550455 DOT1LQ8TEK3 1739 aa14.45□□□□□ -0.1
CCT2-209ENST00000550455 RAPGEF4Q8WZA2 1011 aa14.45□□□□□ -0.1
CCT2-209ENST00000550455 NBPF4Q96M43 638 aa14.45□□□□□ -0.1
CCT2-209ENST00000550455 SHANK3Q9BYB0 1731 aa14.45□□□□□ -0.1
CCT2-209ENST00000550455 CCNL1Q9UK58 526 aaPredicted RBP14.45□□□□□ -0.1
CCT2-209ENST00000550455 INSRP06213 1382 aa14.45□□□□□ -0.1
CCT2-209ENST00000550455 PCDH11XQ9BZA7 1347 aa14.43□□□□□ -0.1
CCT2-209ENST00000550455 PCDH11YQ9BZA8 1340 aa14.43□□□□□ -0.1
CCT2-209ENST00000550455 GRIN3BO60391 1043 aa14.43□□□□□ -0.1
CCT2-209ENST00000550455 TATP17735 454 aaPredicted RBP14.43□□□□□ -0.1
CCT2-209ENST00000550455 C1QTNF8P60827 252 aa14.43□□□□□ -0.1
CCT2-209ENST00000550455 FLT4P35916 1363 aa14.43□□□□□ -0.1
CCT2-209ENST00000550455 FBLN1P23142 703 aa14.41□□□□□ -0.1
CCT2-209ENST00000550455 RRS1Q15050 365 aaKnown RBP14.41□□□□□ -0.1
CCT2-209ENST00000550455 TUBGCP6Q96RT7 1819 aa14.41□□□□□ -0.1
CCT2-209ENST00000550455 RGPD2P0DJD1 1756 aa14.4□□□□□ -0.1
CCT2-209ENST00000550455 COL23A1Q86Y22 540 aaPredicted RBP14.4□□□□□ -0.1
CCT2-209ENST00000550455 GGNBP2Q9H3C7 697 aa14.4□□□□□ -0.1
CCT2-209ENST00000550455 KCNQ4P56696 695 aa14.39□□□□□ -0.11
CCT2-209ENST00000550455 SMARCC1Q92922 1105 aaPredicted RBP14.39□□□□□ -0.11
CCT2-209ENST00000550455 CD2APQ9Y5K6 639 aa14.39□□□□□ -0.11
CCT2-209ENST00000550455 PLEKHG2Q9H7P9 1386 aa14.38□□□□□ -0.11
CCT2-209ENST00000550455 HSP90AB2PQ58FF8 381 aa14.38□□□□□ -0.11
CCT2-209ENST00000550455 KLHL34Q8N239 644 aa14.38□□□□□ -0.11
CCT2-209ENST00000550455 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.38□□□□□ -0.111e-11■■■□□ 19
CCT2-209ENST00000550455 NCAPD2Q15021 1401 aa14.38□□□□□ -0.11
CCT2-209ENST00000550455 NSD3Q9BZ95 1437 aa14.38□□□□□ -0.11
CCT2-209ENST00000550455 PALLDQ8WX93 1383 aa14.37□□□□□ -0.11
CCT2-209ENST00000550455 NKX1-1Q15270 411 aaPredicted RBP14.37□□□□□ -0.11
CCT2-209ENST00000550455 NLGN2Q8NFZ4 835 aa14.37□□□□□ -0.11
CCT2-209ENST00000550455 TIMELESSQ9UNS1 1208 aa14.37□□□□□ -0.11
CCT2-209ENST00000550455 C5P01031 1676 aa14.36□□□□□ -0.11
CCT2-209ENST00000550455 MSH5O43196 834 aa14.36□□□□□ -0.11
CCT2-209ENST00000550455 GIGYF1O75420 1035 aaPredicted RBP14.36□□□□□ -0.11
CCT2-209ENST00000550455 USHBP1Q8N6Y0 703 aa14.36□□□□□ -0.11
CCT2-209ENST00000550455 KIF20BQ96Q89 1820 aa14.36□□□□□ -0.11
CCT2-209ENST00000550455 SENP3-EIF4A1A0A087X0R7 540 aa14.35□□□□□ -0.11
CCT2-209ENST00000550455 CYP27B1O15528 508 aa14.35□□□□□ -0.11
CCT2-209ENST00000550455 WASHC2AQ641Q2 1341 aa14.35□□□□□ -0.11
CCT2-209ENST00000550455 GOLGB1Q14789 3259 aaKnown RBP14.35□□□□□ -0.11
CCT2-209ENST00000550455 MPRIPQ6WCQ1 1025 aa14.34□□□□□ -0.11
CCT2-209ENST00000550455 PELP1Q8IZL8 1130 aaKnown RBP14.34□□□□□ -0.11
CCT2-209ENST00000550455 SPG7Q9UQ90 795 aa14.34□□□□□ -0.11
CCT2-209ENST00000550455 PKD1L3Q7Z443 1732 aa14.34□□□□□ -0.11
CCT2-209ENST00000550455 TAF1LQ8IZX4 1826 aa14.34□□□□□ -0.11
CCT2-209ENST00000550455 YBX3P16989 372 aaKnown RBP eCLIP14.33□□□□□ -0.122e-7■□□□□ 8.9
CCT2-209ENST00000550455 SSFA2P28290 1259 aa14.32□□□□□ -0.12
CCT2-209ENST00000550455 AK7Q96M32 723 aa14.32□□□□□ -0.12
CCT2-209ENST00000550455 CARD14Q9BXL6 1004 aa14.32□□□□□ -0.12
CCT2-209ENST00000550455 C4BP0C0L5 1744 aa14.32□□□□□ -0.12
CCT2-209ENST00000550455 ANKRD26Q9UPS8 1709 aa14.32□□□□□ -0.12
CCT2-209ENST00000550455 EMILIN1Q9Y6C2 1016 aa14.31□□□□□ -0.12
CCT2-209ENST00000550455 PIGBQ92521 554 aa14.3□□□□□ -0.12
CCT2-209ENST00000550455 TOGARAM1Q9Y4F4 1720 aa14.29□□□□□ -0.12
CCT2-209ENST00000550455 ITGB4P16144 1822 aa14.29□□□□□ -0.12
CCT2-209ENST00000550455 LOC102724428A0A0B4J2F2 783 aa14.29□□□□□ -0.12
CCT2-209ENST00000550455 SIK1P57059 783 aa14.29□□□□□ -0.12
CCT2-209ENST00000550455 MSL1Q68DK7 614 aa14.29□□□□□ -0.12
CCT2-209ENST00000550455 IFNL2Q8IZJ0 200 aa14.29□□□□□ -0.12
CCT2-209ENST00000550455 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.28□□□□□ -0.12
CCT2-209ENST00000550455 EYA1Q99502 592 aa14.28□□□□□ -0.12
CCT2-209ENST00000550455 CLSPNQ9HAW4 1339 aa14.28□□□□□ -0.12
CCT2-209ENST00000550455 TMOD3Q9NYL9 352 aa14.28□□□□□ -0.12
CCT2-209ENST00000550455 UBR3Q6ZT12 1888 aa14.27□□□□□ -0.12
CCT2-209ENST00000550455 MAP2P11137 1827 aaKnown RBP14.27□□□□□ -0.12
CCT2-209ENST00000550455 ADCY9O60503 1353 aa14.27□□□□□ -0.12
CCT2-209ENST00000550455 TRIM26Q12899 539 aaPredicted RBP14.27□□□□□ -0.13
CCT2-209ENST00000550455 ATP10DQ9P241 1426 aa14.26□□□□□ -0.13
CCT2-209ENST00000550455 PHKG2P15735 406 aa14.26□□□□□ -0.13
CCT2-209ENST00000550455 POLKQ9UBT6 870 aa14.26□□□□□ -0.13
CCT2-209ENST00000550455 PPM1GO15355 546 aaPredicted RBP14.25□□□□□ -0.13
CCT2-209ENST00000550455 HSP90AB1P08238 724 aaKnown RBP14.25□□□□□ -0.13
CCT2-209ENST00000550455 GPBP1L1Q9HC44 474 aaPredicted RBP14.25□□□□□ -0.13
CCT2-209ENST00000550455 ZNF831Q5JPB2 1677 aa14.25□□□□□ -0.13
CCT2-209ENST00000550455 IGSF1Q8N6C5 1336 aa14.24□□□□□ -0.13
CCT2-209ENST00000550455 ERVV-2B6SEH9 535 aa14.24□□□□□ -0.13
CCT2-209ENST00000550455 ATP6V1AP38606 617 aa14.24□□□□□ -0.13
CCT2-209ENST00000550455 LINC00116Q8NCU8 138 aa14.24□□□□□ -0.13
CCT2-209ENST00000550455 ADRA2BP18089 450 aa14.23□□□□□ -0.13
CCT2-209ENST00000550455 RC3H1Q5TC82 1133 aaKnown RBP14.23□□□□□ -0.13
CCT2-209ENST00000550455 IFFO2Q5TF58 517 aa14.23□□□□□ -0.13
CCT2-209ENST00000550455 AMIGO3Q86WK7 504 aa14.23□□□□□ -0.13
CCT2-209ENST00000550455 NLGN1Q8N2Q7 840 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms