RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 AKT1S1Q96B36 256 aa19.02■□□□□ 0.64
TROAP-211ENST00000549891 UTRNP46939 3433 aa19.02■□□□□ 0.64
TROAP-211ENST00000549891 SMG6Q86US8 1419 aaKnown RBP19.01■□□□□ 0.63
TROAP-211ENST00000549891 PRIM1P49642 420 aaKnown RBP19.01■□□□□ 0.63
TROAP-211ENST00000549891 TUBGCP6Q96RT7 1819 aa19.01■□□□□ 0.63
TROAP-211ENST00000549891 CGNL1Q0VF96 1302 aa19■□□□□ 0.63
TROAP-211ENST00000549891 COL24A1Q17RW2 1714 aa19■□□□□ 0.63
TROAP-211ENST00000549891 KIF20BQ96Q89 1820 aa19■□□□□ 0.63
TROAP-211ENST00000549891 POLD1P28340 1107 aa19■□□□□ 0.63
TROAP-211ENST00000549891 FBLN1P23142 703 aa18.99■□□□□ 0.63
TROAP-211ENST00000549891 CDCA8Q53HL2 280 aa18.99■□□□□ 0.63
TROAP-211ENST00000549891 TFCP2L1Q9NZI6 479 aa18.99■□□□□ 0.63
TROAP-211ENST00000549891 MEGF6O75095 1541 aa18.99■□□□□ 0.63
TROAP-211ENST00000549891 FYB1O15117 783 aa18.98■□□□□ 0.63
TROAP-211ENST00000549891 USP47Q96K76 1375 aa18.97■□□□□ 0.63
TROAP-211ENST00000549891 RRS1Q15050 365 aaKnown RBP18.97■□□□□ 0.63
TROAP-211ENST00000549891 RAPGEF4Q8WZA2 1011 aa18.97■□□□□ 0.63
TROAP-211ENST00000549891 GGNBP2Q9H3C7 697 aa18.97■□□□□ 0.63
TROAP-211ENST00000549891 PNPLA7Q6ZV29 1317 aa18.97■□□□□ 0.63
TROAP-211ENST00000549891 HMGB2P26583 209 aaKnown RBP18.96■□□□□ 0.63
TROAP-211ENST00000549891 ZNF784Q8NCA9 323 aaPredicted RBP18.96■□□□□ 0.63
TROAP-211ENST00000549891 NSD2O96028 1365 aa18.95■□□□□ 0.62
TROAP-211ENST00000549891 NBPF6Q5VWK0 638 aa18.95■□□□□ 0.62
TROAP-211ENST00000549891 NBPF4Q96M43 638 aa18.95■□□□□ 0.62
TROAP-211ENST00000549891 CCNL1Q9UK58 526 aaPredicted RBP18.95■□□□□ 0.62
TROAP-211ENST00000549891 KIF24Q5T7B8 1368 aa18.94■□□□□ 0.62
TROAP-211ENST00000549891 TATP17735 454 aaPredicted RBP18.94■□□□□ 0.62
TROAP-211ENST00000549891 GPR162Q16538 588 aa18.94■□□□□ 0.62
TROAP-211ENST00000549891 INSRP06213 1382 aa18.93■□□□□ 0.62
TROAP-211ENST00000549891 KCNQ4P56696 695 aa18.93■□□□□ 0.62
TROAP-211ENST00000549891 KLHL34Q8N239 644 aa18.93■□□□□ 0.62
TROAP-211ENST00000549891 FLT4P35916 1363 aa18.93■□□□□ 0.62
TROAP-211ENST00000549891 USHBP1Q8N6Y0 703 aa18.92■□□□□ 0.62
TROAP-211ENST00000549891 PCDH11XQ9BZA7 1347 aa18.92■□□□□ 0.62
TROAP-211ENST00000549891 PCDH11YQ9BZA8 1340 aa18.92■□□□□ 0.62
TROAP-211ENST00000549891 C5P01031 1676 aa18.92■□□□□ 0.62
TROAP-211ENST00000549891 HSP90AB2PQ58FF8 381 aa18.9■□□□□ 0.62
TROAP-211ENST00000549891 TAF1LQ8IZX4 1826 aa18.9■□□□□ 0.62
TROAP-211ENST00000549891 MSH5O43196 834 aa18.89■□□□□ 0.61
TROAP-211ENST00000549891 ITGB4P16144 1822 aa18.88■□□□□ 0.61
TROAP-211ENST00000549891 TRIM26Q12899 539 aaPredicted RBP18.88■□□□□ 0.61
TROAP-211ENST00000549891 PKD1L3Q7Z443 1732 aa18.87■□□□□ 0.61
TROAP-211ENST00000549891 PELP1Q8IZL8 1130 aaKnown RBP18.87■□□□□ 0.61
TROAP-211ENST00000549891 FLAD1Q8NFF5 587 aa18.86■□□□□ 0.61
TROAP-211ENST00000549891 MAP2P11137 1827 aaKnown RBP18.86■□□□□ 0.61
TROAP-211ENST00000549891 GOLGB1Q14789 3259 aaKnown RBP18.85■□□□□ 0.61
TROAP-211ENST00000549891 NSD3Q9BZ95 1437 aa18.85■□□□□ 0.61
TROAP-211ENST00000549891 PALLDQ8WX93 1383 aa18.85■□□□□ 0.61
TROAP-211ENST00000549891 COL23A1Q86Y22 540 aaPredicted RBP18.85■□□□□ 0.61
TROAP-211ENST00000549891 ANKRD26Q9UPS8 1709 aa18.85■□□□□ 0.61
TROAP-211ENST00000549891 MPRIPQ6WCQ1 1025 aa18.84■□□□□ 0.61
TROAP-211ENST00000549891 SMARCC1Q92922 1105 aaPredicted RBP18.84■□□□□ 0.61
TROAP-211ENST00000549891 TOGARAM1Q9Y4F4 1720 aa18.83■□□□□ 0.61
TROAP-211ENST00000549891 NLGN2Q8NFZ4 835 aa18.83■□□□□ 0.6
TROAP-211ENST00000549891 CARD14Q9BXL6 1004 aa18.83■□□□□ 0.6
TROAP-211ENST00000549891 TIMELESSQ9UNS1 1208 aa18.83■□□□□ 0.6
TROAP-211ENST00000549891 PPM1GO15355 546 aaPredicted RBP18.82■□□□□ 0.6
TROAP-211ENST00000549891 CYP27B1O15528 508 aa18.82■□□□□ 0.6
TROAP-211ENST00000549891 GRIN3BO60391 1043 aa18.82■□□□□ 0.6
TROAP-211ENST00000549891 SPG7Q9UQ90 795 aa18.82■□□□□ 0.6
TROAP-211ENST00000549891 EMILIN1Q9Y6C2 1016 aa18.82■□□□□ 0.6
TROAP-211ENST00000549891 C4BP0C0L5 1744 aa18.82■□□□□ 0.6
TROAP-211ENST00000549891 NCAPD2Q15021 1401 aa18.81■□□□□ 0.6
TROAP-211ENST00000549891 C1QTNF8P60827 252 aa18.8■□□□□ 0.6
TROAP-211ENST00000549891 AK7Q96M32 723 aa18.8■□□□□ 0.6
TROAP-211ENST00000549891 WASHC2AQ641Q2 1341 aa18.79■□□□□ 0.6
TROAP-211ENST00000549891 NKX1-1Q15270 411 aaPredicted RBP18.79■□□□□ 0.6
TROAP-211ENST00000549891 MSL1Q68DK7 614 aa18.79■□□□□ 0.6
TROAP-211ENST00000549891 UBR3Q6ZT12 1888 aa18.79■□□□□ 0.6
TROAP-211ENST00000549891 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.78■□□□□ 0.6
TROAP-211ENST00000549891 CD2APQ9Y5K6 639 aa18.78■□□□□ 0.6
TROAP-211ENST00000549891 SENP3-EIF4A1A0A087X0R7 540 aa18.76■□□□□ 0.59
TROAP-211ENST00000549891 GIGYF1O75420 1035 aaPredicted RBP18.76■□□□□ 0.59
TROAP-211ENST00000549891 PIGBQ92521 554 aa18.76■□□□□ 0.59
TROAP-211ENST00000549891 YBX3P16989 372 aaKnown RBP eCLIP18.75■□□□□ 0.597e-8■□□□□ 11.2
TROAP-211ENST00000549891 CLSPNQ9HAW4 1339 aa18.74■□□□□ 0.59
TROAP-211ENST00000549891 EYA1Q99502 592 aa18.74■□□□□ 0.59
TROAP-211ENST00000549891 TMOD3Q9NYL9 352 aa18.74■□□□□ 0.59
TROAP-211ENST00000549891 PLEKHG2Q9H7P9 1386 aa18.73■□□□□ 0.59
TROAP-211ENST00000549891 SSFA2P28290 1259 aa18.73■□□□□ 0.59
TROAP-211ENST00000549891 IFNL2Q8IZJ0 200 aa18.73■□□□□ 0.59
TROAP-211ENST00000549891 LOC102724428A0A0B4J2F2 783 aa18.72■□□□□ 0.59
TROAP-211ENST00000549891 PHF14O94880 888 aa18.72■□□□□ 0.59
TROAP-211ENST00000549891 SIK1P57059 783 aa18.72■□□□□ 0.59
TROAP-211ENST00000549891 POLKQ9UBT6 870 aa18.72■□□□□ 0.59
TROAP-211ENST00000549891 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.71■□□□□ 0.59
TROAP-211ENST00000549891 POLR3GLQ9BT43 218 aa18.71■□□□□ 0.59
TROAP-211ENST00000549891 PHKG2P15735 406 aa18.7■□□□□ 0.58
TROAP-211ENST00000549891 ATP6V1AP38606 617 aa18.69■□□□□ 0.58
TROAP-211ENST00000549891 EIF4A2Q14240 407 aaKnown RBP18.68■□□□□ 0.58
TROAP-211ENST00000549891 LINC00116Q8NCU8 138 aa18.68■□□□□ 0.58
TROAP-211ENST00000549891 ASAP1Q9ULH1 1129 aa18.68■□□□□ 0.58
TROAP-211ENST00000549891 ZNF831Q5JPB2 1677 aa18.67■□□□□ 0.58
TROAP-211ENST00000549891 TNNT2P45379 298 aaPredicted RBP18.67■□□□□ 0.58
TROAP-211ENST00000549891 AMIGO3Q86WK7 504 aa18.67■□□□□ 0.58
TROAP-211ENST00000549891 GNPATO15228 680 aa18.66■□□□□ 0.58
TROAP-211ENST00000549891 HSP90AB1P08238 724 aaKnown RBP18.66■□□□□ 0.58
TROAP-211ENST00000549891 EIF4G2P78344 907 aaKnown RBP eCLIP18.65■□□□□ 0.58
TROAP-211ENST00000549891 ATG3Q9NT62 314 aa18.65■□□□□ 0.58
TROAP-211ENST00000549891 IGSF1Q8N6C5 1336 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms