RNA–Protein interactions for RNA: ENST00000549490.1

UBE2N-203, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2

Gene UBE2N, Length 676 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-203ENST00000549490 TUBGCP6Q96RT7 1819 aa12.83□□□□□ -0.35
UBE2N-203ENST00000549490 IP6K1Q92551 441 aa12.82□□□□□ -0.36
UBE2N-203ENST00000549490 LTV1Q96GA3 475 aaPredicted RBP12.82□□□□□ -0.36
UBE2N-203ENST00000549490 WWC3Q9ULE0 1092 aa12.82□□□□□ -0.36
UBE2N-203ENST00000549490 KAT6BQ8WYB5 2073 aa12.82□□□□□ -0.36
UBE2N-203ENST00000549490 SBNO2Q9Y2G9 1366 aa12.81□□□□□ -0.36
UBE2N-203ENST00000549490 ZCRB1Q8TBF4 217 aaKnown RBP12.81□□□□□ -0.36
UBE2N-203ENST00000549490 IGSF1Q8N6C5 1336 aa12.81□□□□□ -0.36
UBE2N-203ENST00000549490 USP47Q96K76 1375 aa12.81□□□□□ -0.36
UBE2N-203ENST00000549490 FLAD1Q8NFF5 587 aa12.8□□□□□ -0.36
UBE2N-203ENST00000549490 COL13A1Q5TAT6 717 aaPredicted RBP12.79□□□□□ -0.36
UBE2N-203ENST00000549490 TOMM70O94826 608 aa12.78□□□□□ -0.36
UBE2N-203ENST00000549490 LY75O60449 1722 aa12.78□□□□□ -0.36
UBE2N-203ENST00000549490 CD163L1Q9NR16 1453 aa12.78□□□□□ -0.36
UBE2N-203ENST00000549490 AMIGO3Q86WK7 504 aa12.77□□□□□ -0.37
UBE2N-203ENST00000549490 L3MBTL2Q969R5 705 aa12.77□□□□□ -0.37
UBE2N-203ENST00000549490 CAPN15O75808 1086 aa12.76□□□□□ -0.37
UBE2N-203ENST00000549490 SMIM5Q71RC9 77 aa12.76□□□□□ -0.37
UBE2N-203ENST00000549490 HDGFL2Q7Z4V5 671 aaPredicted RBP12.76□□□□□ -0.37
UBE2N-203ENST00000549490 TMC1Q8TDI8 760 aa12.76□□□□□ -0.37
UBE2N-203ENST00000549490 SLC12A5Q9H2X9 1139 aa12.76□□□□□ -0.37
UBE2N-203ENST00000549490 USP54Q70EL1 1684 aa12.76□□□□□ -0.37
UBE2N-203ENST00000549490 MEGF6O75095 1541 aa12.75□□□□□ -0.37
UBE2N-203ENST00000549490 HMGB2P26583 209 aaKnown RBP12.75□□□□□ -0.37
UBE2N-203ENST00000549490 HOXC9P31274 260 aa12.75□□□□□ -0.37
UBE2N-203ENST00000549490 EDC4Q6P2E9 1401 aaKnown RBP12.75□□□□□ -0.37
UBE2N-203ENST00000549490 MON2Q7Z3U7 1717 aa12.75□□□□□ -0.37
UBE2N-203ENST00000549490 DOT1LQ8TEK3 1739 aa12.75□□□□□ -0.37
UBE2N-203ENST00000549490 LTN1O94822 1766 aa12.74□□□□□ -0.37
UBE2N-203ENST00000549490 ROCK2O75116 1388 aaKnown RBP12.74□□□□□ -0.37
UBE2N-203ENST00000549490 PALLDQ8WX93 1383 aa12.74□□□□□ -0.37
UBE2N-203ENST00000549490 MAP3K19Q56UN5 1328 aa12.74□□□□□ -0.37
UBE2N-203ENST00000549490 FBLN1P23142 703 aa12.74□□□□□ -0.37
UBE2N-203ENST00000549490 HTRA3P83110 453 aa12.74□□□□□ -0.37
UBE2N-203ENST00000549490 AK7Q96M32 723 aa12.74□□□□□ -0.37
UBE2N-203ENST00000549490 NMRK2Q9NPI5 230 aa12.74□□□□□ -0.37
UBE2N-203ENST00000549490 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.73□□□□□ -0.37
UBE2N-203ENST00000549490 PHF14O94880 888 aa12.73□□□□□ -0.37
UBE2N-203ENST00000549490 JMYQ8N9B5 988 aa12.73□□□□□ -0.37
UBE2N-203ENST00000549490 KLRG1Q96E93 195 aa12.73□□□□□ -0.37
UBE2N-203ENST00000549490 AMPHP49418 695 aa12.72□□□□□ -0.37
UBE2N-203ENST00000549490 NBPF6Q5VWK0 638 aa12.72□□□□□ -0.37
UBE2N-203ENST00000549490 MPRIPQ6WCQ1 1025 aa12.72□□□□□ -0.37
UBE2N-203ENST00000549490 NBPF4Q96M43 638 aa12.72□□□□□ -0.37
UBE2N-203ENST00000549490 TERF2IPQ9NYB0 399 aa12.72□□□□□ -0.37
UBE2N-203ENST00000549490 CGNL1Q0VF96 1302 aa12.71□□□□□ -0.37
UBE2N-203ENST00000549490 PRELPP51888 382 aa12.71□□□□□ -0.37
UBE2N-203ENST00000549490 TNS4Q8IZW8 715 aa12.71□□□□□ -0.37
UBE2N-203ENST00000549490 USHBP1Q8N6Y0 703 aa12.71□□□□□ -0.37
UBE2N-203ENST00000549490 RBM46Q8TBY0 533 aaKnown RBP12.71□□□□□ -0.37
UBE2N-203ENST00000549490 FAM208AQ9UK61 1670 aaKnown RBP12.7□□□□□ -0.38
UBE2N-203ENST00000549490 A0A1W2PP64 1363 aa12.7□□□□□ -0.38
UBE2N-203ENST00000549490 SSFA2P28290 1259 aa12.7□□□□□ -0.38
UBE2N-203ENST00000549490 RAPGEF4Q8WZA2 1011 aa12.7□□□□□ -0.38
UBE2N-203ENST00000549490 SMARCC1Q92922 1105 aaPredicted RBP12.7□□□□□ -0.38
UBE2N-203ENST00000549490 C5P01031 1676 aa12.7□□□□□ -0.38
UBE2N-203ENST00000549490 CICQ96RK0 1608 aaPredicted RBP12.7□□□□□ -0.38
UBE2N-203ENST00000549490 TATP17735 454 aaPredicted RBP12.69□□□□□ -0.38
UBE2N-203ENST00000549490 ARHGAP27Q6ZUM4 889 aa12.69□□□□□ -0.38
UBE2N-203ENST00000549490 COG3Q96JB2 828 aa12.69□□□□□ -0.38
UBE2N-203ENST00000549490 BCS1LQ9Y276 419 aa12.69□□□□□ -0.38
UBE2N-203ENST00000549490 PXDNLA1KZ92 1463 aa12.68□□□□□ -0.38
UBE2N-203ENST00000549490 A0A0G2JLW4 131 aa12.68□□□□□ -0.38
UBE2N-203ENST00000549490 MMP10P09238 476 aa12.68□□□□□ -0.38
UBE2N-203ENST00000549490 LINC00116Q8NCU8 138 aa12.68□□□□□ -0.38
UBE2N-203ENST00000549490 NSD3Q9BZ95 1437 aa12.68□□□□□ -0.38
UBE2N-203ENST00000549490 PCDH11XQ9BZA7 1347 aa12.67□□□□□ -0.38
UBE2N-203ENST00000549490 PCDH11YQ9BZA8 1340 aa12.67□□□□□ -0.38
UBE2N-203ENST00000549490 CYP27B1O15528 508 aa12.67□□□□□ -0.38
UBE2N-203ENST00000549490 TGFB2P61812 414 aa12.67□□□□□ -0.38
UBE2N-203ENST00000549490 FSTL1Q12841 308 aa12.67□□□□□ -0.38
UBE2N-203ENST00000549490 C16orf71Q8IYS4 520 aaPredicted RBP12.67□□□□□ -0.38
UBE2N-203ENST00000549490 PIGBQ92521 554 aa12.67□□□□□ -0.38
UBE2N-203ENST00000549490 C4BP0C0L5 1744 aa12.67□□□□□ -0.38
UBE2N-203ENST00000549490 TOGARAM1Q9Y4F4 1720 aa12.66□□□□□ -0.38
UBE2N-203ENST00000549490 LOC102724428A0A0B4J2F2 783 aa12.66□□□□□ -0.38
UBE2N-203ENST00000549490 SIK1P57059 783 aa12.66□□□□□ -0.38
UBE2N-203ENST00000549490 RRS1Q15050 365 aaKnown RBP12.66□□□□□ -0.38
UBE2N-203ENST00000549490 SIN3AQ96ST3 1273 aa12.66□□□□□ -0.38
UBE2N-203ENST00000549490 PCNTO95613 3336 aa12.66□□□□□ -0.38
UBE2N-203ENST00000549490 GNPATO15228 680 aa12.65□□□□□ -0.38
UBE2N-203ENST00000549490 C9orf131Q5VYM1 1079 aa12.65□□□□□ -0.38
UBE2N-203ENST00000549490 PUS7Q96PZ0 661 aaKnown RBP12.65□□□□□ -0.38
UBE2N-203ENST00000549490 RTL1A6NKG5 1358 aa12.65□□□□□ -0.38
UBE2N-203ENST00000549490 FCHSD2O94868 740 aa12.64□□□□□ -0.39
UBE2N-203ENST00000549490 DPEP1P16444 411 aa12.64□□□□□ -0.39
UBE2N-203ENST00000549490 ITPK1Q13572 414 aa12.64□□□□□ -0.39
UBE2N-203ENST00000549490 WDR90Q96KV7 1748 aa12.64□□□□□ -0.39
UBE2N-203ENST00000549490 TAF1LQ8IZX4 1826 aa12.63□□□□□ -0.39
UBE2N-203ENST00000549490 CARD11Q9BXL7 1154 aa12.63□□□□□ -0.39
UBE2N-203ENST00000549490 RGPD2P0DJD1 1756 aa12.62□□□□□ -0.39
UBE2N-203ENST00000549490 NEUROD1Q13562 356 aa12.62□□□□□ -0.39
UBE2N-203ENST00000549490 NKX1-1Q15270 411 aaPredicted RBP12.62□□□□□ -0.39
UBE2N-203ENST00000549490 HSP90AB2PQ58FF8 381 aa12.62□□□□□ -0.39
UBE2N-203ENST00000549490 NLGN1Q8N2Q7 840 aa12.62□□□□□ -0.39
UBE2N-203ENST00000549490 RRAGCQ9HB90 399 aa12.62□□□□□ -0.39
UBE2N-203ENST00000549490 C10orf71Q711Q0 1435 aa12.62□□□□□ -0.39
UBE2N-203ENST00000549490 SMG6Q86US8 1419 aaKnown RBP12.62□□□□□ -0.39
UBE2N-203ENST00000549490 UBR3Q6ZT12 1888 aa12.61□□□□□ -0.39
UBE2N-203ENST00000549490 PLEKHG2Q9H7P9 1386 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 343.6 ms