RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 MCTP1Q6DN14 999 aa16.87■□□□□ 0.29
PRPF40B-209ENST00000548825 CEP85Q6P2H3 762 aa16.87■□□□□ 0.29
PRPF40B-209ENST00000548825 XRCC6P12956 609 aaKnown RBP eCLIP16.86■□□□□ 0.29
PRPF40B-209ENST00000548825 K7ELQ4 463 aaPredicted RBP16.86■□□□□ 0.29
PRPF40B-209ENST00000548825 L1TD1Q5T7N2 865 aaKnown RBP16.86■□□□□ 0.29
PRPF40B-209ENST00000548825 ANO2Q9NQ90 1003 aa16.86■□□□□ 0.29
PRPF40B-209ENST00000548825 DDX49Q9Y6V7 483 aaKnown RBP16.86■□□□□ 0.29
PRPF40B-209ENST00000548825 OS9Q13438 667 aaPredicted RBP16.86■□□□□ 0.29
PRPF40B-209ENST00000548825 GBP4Q96PP9 640 aa16.86■□□□□ 0.29
PRPF40B-209ENST00000548825 ABCC4O15439 1325 aa16.85■□□□□ 0.29
PRPF40B-209ENST00000548825 ARHGAP45Q92619 1136 aa16.85■□□□□ 0.29
PRPF40B-209ENST00000548825 TMEM131LA2VDJ0 1609 aa16.85■□□□□ 0.29
PRPF40B-209ENST00000548825 PKP1Q13835 747 aa16.85■□□□□ 0.29
PRPF40B-209ENST00000548825 KCNA6P17658 529 aa16.84■□□□□ 0.29
PRPF40B-209ENST00000548825 NUTM1Q86Y26 1132 aa16.84■□□□□ 0.29
PRPF40B-209ENST00000548825 CHL1O00533 1208 aa16.84■□□□□ 0.29
PRPF40B-209ENST00000548825 HMMRO75330 724 aa16.84■□□□□ 0.29
PRPF40B-209ENST00000548825 ESCO1Q5FWF5 840 aa16.83■□□□□ 0.29
PRPF40B-209ENST00000548825 TTC22Q5TAA0 569 aa16.83■□□□□ 0.29
PRPF40B-209ENST00000548825 GOLGA6L22H0YM25 854 aa16.83■□□□□ 0.28
PRPF40B-209ENST00000548825 UPF3BQ9BZI7 483 aaKnown RBP16.83■□□□□ 0.28
PRPF40B-209ENST00000548825 DCTPP1Q9H773 170 aa16.83■□□□□ 0.28
PRPF40B-209ENST00000548825 NEURL4Q96JN8 1562 aa16.83■□□□□ 0.28
PRPF40B-209ENST00000548825 NEK4P51957 841 aa16.83■□□□□ 0.28
PRPF40B-209ENST00000548825 INTS3Q68E01 1043 aaKnown RBP16.83■□□□□ 0.28
PRPF40B-209ENST00000548825 ZGPATQ8N5A5 531 aaKnown RBP16.83■□□□□ 0.28
PRPF40B-209ENST00000548825 LRRFIP2Q9Y608 721 aaKnown RBP16.83■□□□□ 0.28
PRPF40B-209ENST00000548825 PREX1Q8TCU6 1659 aa16.82■□□□□ 0.28
PRPF40B-209ENST00000548825 MAP2P11137 1827 aaKnown RBP16.82■□□□□ 0.28
PRPF40B-209ENST00000548825 HDGFL1Q5TGJ6 251 aa16.82■□□□□ 0.28
PRPF40B-209ENST00000548825 ANKRD44Q8N8A2 993 aa16.82■□□□□ 0.28
PRPF40B-209ENST00000548825 NAP1L5Q96NT1 182 aaPredicted RBP16.82■□□□□ 0.28
PRPF40B-209ENST00000548825 PHAXQ9H814 394 aaKnown RBP16.82■□□□□ 0.28
PRPF40B-209ENST00000548825 CCDC9Q9Y3X0 531 aaKnown RBP16.82■□□□□ 0.28
PRPF40B-209ENST00000548825 DDX11L8A8MPP1 907 aa16.81■□□□□ 0.28
PRPF40B-209ENST00000548825 FLIIQ13045 1269 aa16.81■□□□□ 0.28
PRPF40B-209ENST00000548825 DDX54Q8TDD1 881 aaKnown RBP16.81■□□□□ 0.28
PRPF40B-209ENST00000548825 LRRC59Q96AG4 307 aaKnown RBP16.81■□□□□ 0.28
PRPF40B-209ENST00000548825 TRIM44Q96DX7 344 aaPredicted RBP16.81■□□□□ 0.28
PRPF40B-209ENST00000548825 PNMA6EA0A0J9YXQ4 647 aa16.81■□□□□ 0.28
PRPF40B-209ENST00000548825 AIMP1Q12904 312 aaKnown RBP16.81■□□□□ 0.28
PRPF40B-209ENST00000548825 SETD1BQ9UPS6 1966 aaKnown RBP16.81■□□□□ 0.28
PRPF40B-209ENST00000548825 RBM25P49756 843 aaKnown RBP16.81■□□□□ 0.28
PRPF40B-209ENST00000548825 HAP1P54257 671 aaPredicted RBP16.81■□□□□ 0.28
PRPF40B-209ENST00000548825 PSME1Q06323 249 aa16.81■□□□□ 0.28
PRPF40B-209ENST00000548825 KIF2CQ99661 725 aa16.81■□□□□ 0.28
PRPF40B-209ENST00000548825 CLTCQ00610 1675 aaKnown RBP16.8■□□□□ 0.28
PRPF40B-209ENST00000548825 SURF6O75683 361 aaKnown RBP16.8■□□□□ 0.28
PRPF40B-209ENST00000548825 GNAI2P04899 355 aa16.8■□□□□ 0.28
PRPF40B-209ENST00000548825 MPRIPQ6WCQ1 1025 aa16.8■□□□□ 0.28
PRPF40B-209ENST00000548825 TMEM2Q9UHN6 1383 aa16.8■□□□□ 0.28
PRPF40B-209ENST00000548825 RPAP2Q8IXW5 612 aaPredicted RBP16.79■□□□□ 0.28
PRPF40B-209ENST00000548825 CAVIN1Q6NZI2 390 aaKnown RBP16.79■□□□□ 0.28
PRPF40B-209ENST00000548825 GNAT3A8MTJ3 354 aa16.78■□□□□ 0.28
PRPF40B-209ENST00000548825 RRAGDQ9NQL2 400 aaPredicted RBP16.78■□□□□ 0.28
PRPF40B-209ENST00000548825 KCNQ3O43525 872 aa16.77■□□□□ 0.28
PRPF40B-209ENST00000548825 PRPF40AO75400 957 aaKnown RBP16.77■□□□□ 0.28
PRPF40B-209ENST00000548825 UBTFL1P0CB47 393 aaPredicted RBP16.77■□□□□ 0.28
PRPF40B-209ENST00000548825 CPSF1Q10570 1443 aaKnown RBP16.77■□□□□ 0.28
PRPF40B-209ENST00000548825 ADGRB2O60241 1585 aa16.77■□□□□ 0.27
PRPF40B-209ENST00000548825 ATP7BP35670 1465 aa16.77■□□□□ 0.27
PRPF40B-209ENST00000548825 ST18O60284 1047 aa16.77■□□□□ 0.27
PRPF40B-209ENST00000548825 NCBP3Q53F19 620 aaKnown RBP16.77■□□□□ 0.27
PRPF40B-209ENST00000548825 MPNDQ8N594 471 aa16.77■□□□□ 0.27
PRPF40B-209ENST00000548825 LGR6Q9HBX8 967 aa16.77■□□□□ 0.27
PRPF40B-209ENST00000548825 TEFQ10587 303 aa16.76■□□□□ 0.27
PRPF40B-209ENST00000548825 CCDC30Q5VVM6 783 aa16.76■□□□□ 0.27
PRPF40B-209ENST00000548825 GRPEL1Q9HAV7 217 aa16.76■□□□□ 0.27
PRPF40B-209ENST00000548825 RICTORQ6R327 1708 aa16.76■□□□□ 0.27
PRPF40B-209ENST00000548825 GAS2L3Q86XJ1 694 aa16.76■□□□□ 0.27
PRPF40B-209ENST00000548825 PPP6R1Q9UPN7 881 aa16.76■□□□□ 0.27
PRPF40B-209ENST00000548825 LRRCC1Q9C099 1032 aa16.75■□□□□ 0.27
PRPF40B-209ENST00000548825 RTL1A6NKG5 1358 aa16.75■□□□□ 0.27
PRPF40B-209ENST00000548825 PDE1AP54750 535 aa16.75■□□□□ 0.27
PRPF40B-209ENST00000548825 IL17REQ8NFR9 667 aa16.75■□□□□ 0.27
PRPF40B-209ENST00000548825 USP26Q9BXU7 913 aa16.75■□□□□ 0.27
PRPF40B-209ENST00000548825 PIP4K2AP48426 406 aaPredicted RBP16.75■□□□□ 0.27
PRPF40B-209ENST00000548825 JARID2Q92833 1246 aaPredicted RBP16.75■□□□□ 0.27
PRPF40B-209ENST00000548825 GDPD2Q9HCC8 539 aa16.75■□□□□ 0.27
PRPF40B-209ENST00000548825 RBM27Q9P2N5 1060 aaKnown RBP16.75■□□□□ 0.27
PRPF40B-209ENST00000548825 SRGAP3O43295 1099 aa16.74■□□□□ 0.27
PRPF40B-209ENST00000548825 REC8O95072 547 aa16.74■□□□□ 0.27
PRPF40B-209ENST00000548825 RNF214Q8ND24 703 aa16.74■□□□□ 0.27
PRPF40B-209ENST00000548825 ERC2O15083 957 aa16.73■□□□□ 0.27
PRPF40B-209ENST00000548825 HOXC9P31274 260 aa16.73■□□□□ 0.27
PRPF40B-209ENST00000548825 ZC3H6P61129 1189 aaKnown RBP16.73■□□□□ 0.27
PRPF40B-209ENST00000548825 RABEP1Q15276 862 aa16.73■□□□□ 0.27
PRPF40B-209ENST00000548825 TAF7Q15545 349 aaPredicted RBP16.73■□□□□ 0.27
PRPF40B-209ENST00000548825 CCT4P50991 539 aaKnown RBP16.73■□□□□ 0.27
PRPF40B-209ENST00000548825 ANP32BQ92688 251 aaKnown RBP16.73■□□□□ 0.27
PRPF40B-209ENST00000548825 TAOK2Q9UL54 1235 aa16.73■□□□□ 0.27
PRPF40B-209ENST00000548825 MX1P20591 662 aa16.73■□□□□ 0.27
PRPF40B-209ENST00000548825 UNC5CLQ8IV45 518 aa16.73■□□□□ 0.27
PRPF40B-209ENST00000548825 THEMISQ8N1K5 641 aaPredicted RBP16.73■□□□□ 0.27
PRPF40B-209ENST00000548825 ZNF530Q6P9A1 599 aaPredicted RBP16.72■□□□□ 0.27
PRPF40B-209ENST00000548825 AATKQ6ZMQ8 1374 aa16.72■□□□□ 0.27
PRPF40B-209ENST00000548825 PIK3R4Q99570 1358 aa16.72■□□□□ 0.27
PRPF40B-209ENST00000548825 PLEKHG3A1L390 1219 aa16.72■□□□□ 0.27
PRPF40B-209ENST00000548825 PI4KAP2A4QPH2 592 aa16.72■□□□□ 0.27
PRPF40B-209ENST00000548825 PI4KAP1Q8N8J0 262 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms