RNA–Protein interactions for RNA: ENST00000547533.1

AC055716.3-201, humanhuman

TSL 3 BASIC

Gene AC055716.3, Length 761 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.3-201ENST00000547533 ZCRB1Q8TBF4 217 aaKnown RBP12.79□□□□□ -0.36
AC055716.3-201ENST00000547533 USP47Q96K76 1375 aa12.79□□□□□ -0.36
AC055716.3-201ENST00000547533 HOXC9P31274 260 aa12.78□□□□□ -0.36
AC055716.3-201ENST00000547533 RAPGEF4Q8WZA2 1011 aa12.78□□□□□ -0.36
AC055716.3-201ENST00000547533 AKT1S1Q96B36 256 aa12.78□□□□□ -0.36
AC055716.3-201ENST00000547533 LRRC4BQ9NT99 713 aa12.78□□□□□ -0.36
AC055716.3-201ENST00000547533 CCNL1Q9UK58 526 aaPredicted RBP12.78□□□□□ -0.36
AC055716.3-201ENST00000547533 RGPD2P0DJD1 1756 aa12.78□□□□□ -0.36
AC055716.3-201ENST00000547533 RTL1A6NKG5 1358 aa12.78□□□□□ -0.36
AC055716.3-201ENST00000547533 COL24A1Q17RW2 1714 aa12.77□□□□□ -0.36
AC055716.3-201ENST00000547533 TUBGCP6Q96RT7 1819 aa12.77□□□□□ -0.37
AC055716.3-201ENST00000547533 SENP3-EIF4A1A0A087X0R7 540 aa12.77□□□□□ -0.37
AC055716.3-201ENST00000547533 PRIM1P49642 420 aaKnown RBP12.77□□□□□ -0.37
AC055716.3-201ENST00000547533 GRIN3BO60391 1043 aa12.76□□□□□ -0.37
AC055716.3-201ENST00000547533 GIGYF1O75420 1035 aaPredicted RBP12.76□□□□□ -0.37
AC055716.3-201ENST00000547533 C1QTNF8P60827 252 aa12.76□□□□□ -0.37
AC055716.3-201ENST00000547533 CDCA8Q53HL2 280 aa12.76□□□□□ -0.37
AC055716.3-201ENST00000547533 MAP3K19Q56UN5 1328 aa12.76□□□□□ -0.37
AC055716.3-201ENST00000547533 PNPLA7Q6ZV29 1317 aa12.76□□□□□ -0.37
AC055716.3-201ENST00000547533 KIF20BQ96Q89 1820 aa12.76□□□□□ -0.37
AC055716.3-201ENST00000547533 TATP17735 454 aaPredicted RBP12.75□□□□□ -0.37
AC055716.3-201ENST00000547533 TMF1P82094 1093 aa12.75□□□□□ -0.37
AC055716.3-201ENST00000547533 FLAD1Q8NFF5 587 aa12.75□□□□□ -0.37
AC055716.3-201ENST00000547533 SHANK3Q9BYB0 1731 aa12.75□□□□□ -0.37
AC055716.3-201ENST00000547533 C5P01031 1676 aa12.74□□□□□ -0.37
AC055716.3-201ENST00000547533 ST20-MTHFSA0A0A6YYL1 179 aa12.74□□□□□ -0.37
AC055716.3-201ENST00000547533 PCDH11XQ9BZA7 1347 aa12.73□□□□□ -0.37
AC055716.3-201ENST00000547533 PCDH11YQ9BZA8 1340 aa12.73□□□□□ -0.37
AC055716.3-201ENST00000547533 MEGF6O75095 1541 aa12.72□□□□□ -0.37
AC055716.3-201ENST00000547533 UTRNP46939 3433 aa12.72□□□□□ -0.37
AC055716.3-201ENST00000547533 KIF24Q5T7B8 1368 aa12.71□□□□□ -0.37
AC055716.3-201ENST00000547533 SMARCC1Q92922 1105 aaPredicted RBP12.71□□□□□ -0.37
AC055716.3-201ENST00000547533 NSD3Q9BZ95 1437 aa12.71□□□□□ -0.38
AC055716.3-201ENST00000547533 FLT4P35916 1363 aa12.7□□□□□ -0.38
AC055716.3-201ENST00000547533 TAF1LQ8IZX4 1826 aa12.7□□□□□ -0.38
AC055716.3-201ENST00000547533 KCNQ4P56696 695 aa12.7□□□□□ -0.38
AC055716.3-201ENST00000547533 RRS1Q15050 365 aaKnown RBP12.7□□□□□ -0.38
AC055716.3-201ENST00000547533 TESK2Q96S53 571 aa12.7□□□□□ -0.38
AC055716.3-201ENST00000547533 GGNBP2Q9H3C7 697 aa12.7□□□□□ -0.38
AC055716.3-201ENST00000547533 NSD2O96028 1365 aa12.69□□□□□ -0.38
AC055716.3-201ENST00000547533 NBPF6Q5VWK0 638 aa12.69□□□□□ -0.38
AC055716.3-201ENST00000547533 NBPF4Q96M43 638 aa12.69□□□□□ -0.38
AC055716.3-201ENST00000547533 ITGB4P16144 1822 aa12.69□□□□□ -0.38
AC055716.3-201ENST00000547533 INSRP06213 1382 aa12.69□□□□□ -0.38
AC055716.3-201ENST00000547533 FYB1O15117 783 aa12.68□□□□□ -0.38
AC055716.3-201ENST00000547533 MPRIPQ6WCQ1 1025 aa12.68□□□□□ -0.38
AC055716.3-201ENST00000547533 COL23A1Q86Y22 540 aaPredicted RBP12.68□□□□□ -0.38
AC055716.3-201ENST00000547533 USHBP1Q8N6Y0 703 aa12.68□□□□□ -0.38
AC055716.3-201ENST00000547533 AK7Q96M32 723 aa12.68□□□□□ -0.38
AC055716.3-201ENST00000547533 CD2APQ9Y5K6 639 aa12.68□□□□□ -0.38
AC055716.3-201ENST00000547533 PALLDQ8WX93 1383 aa12.68□□□□□ -0.38
AC055716.3-201ENST00000547533 NLGN2Q8NFZ4 835 aa12.67□□□□□ -0.38
AC055716.3-201ENST00000547533 SPG7Q9UQ90 795 aa12.67□□□□□ -0.38
AC055716.3-201ENST00000547533 FBLN1P23142 703 aa12.66□□□□□ -0.38
AC055716.3-201ENST00000547533 MSL1Q68DK7 614 aa12.66□□□□□ -0.38
AC055716.3-201ENST00000547533 C4BP0C0L5 1744 aa12.65□□□□□ -0.38
AC055716.3-201ENST00000547533 PKD1L3Q7Z443 1732 aa12.65□□□□□ -0.38
AC055716.3-201ENST00000547533 PPM1GO15355 546 aaPredicted RBP12.64□□□□□ -0.39
AC055716.3-201ENST00000547533 HSP90AB2PQ58FF8 381 aa12.64□□□□□ -0.39
AC055716.3-201ENST00000547533 GPBP1L1Q9HC44 474 aaPredicted RBP12.64□□□□□ -0.39
AC055716.3-201ENST00000547533 MAP2P11137 1827 aaKnown RBP12.64□□□□□ -0.39
AC055716.3-201ENST00000547533 UBR3Q6ZT12 1888 aa12.63□□□□□ -0.39
AC055716.3-201ENST00000547533 YBX3P16989 372 aaKnown RBP eCLIP12.63□□□□□ -0.39
AC055716.3-201ENST00000547533 TMOD3Q9NYL9 352 aa12.63□□□□□ -0.39
AC055716.3-201ENST00000547533 PHF14O94880 888 aa12.62□□□□□ -0.39
AC055716.3-201ENST00000547533 TOGARAM1Q9Y4F4 1720 aa12.62□□□□□ -0.39
AC055716.3-201ENST00000547533 SSFA2P28290 1259 aa12.61□□□□□ -0.39
AC055716.3-201ENST00000547533 ATP10DQ9P241 1426 aa12.61□□□□□ -0.39
AC055716.3-201ENST00000547533 GOLGB1Q14789 3259 aaKnown RBP12.61□□□□□ -0.39
AC055716.3-201ENST00000547533 ANKRD26Q9UPS8 1709 aa12.6□□□□□ -0.39
AC055716.3-201ENST00000547533 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.6□□□□□ -0.39
AC055716.3-201ENST00000547533 CYP27B1O15528 508 aa12.6□□□□□ -0.39
AC055716.3-201ENST00000547533 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.6□□□□□ -0.39
AC055716.3-201ENST00000547533 LOC102724428A0A0B4J2F2 783 aa12.59□□□□□ -0.39
AC055716.3-201ENST00000547533 SIK1P57059 783 aa12.59□□□□□ -0.39
AC055716.3-201ENST00000547533 NKX1-1Q15270 411 aaPredicted RBP12.59□□□□□ -0.39
AC055716.3-201ENST00000547533 IFNL2Q8IZJ0 200 aa12.59□□□□□ -0.39
AC055716.3-201ENST00000547533 IGSF1Q8N6C5 1336 aa12.59□□□□□ -0.39
AC055716.3-201ENST00000547533 ATP6V1AP38606 617 aa12.58□□□□□ -0.4
AC055716.3-201ENST00000547533 PIGBQ92521 554 aa12.58□□□□□ -0.4
AC055716.3-201ENST00000547533 EMILIN1Q9Y6C2 1016 aa12.58□□□□□ -0.4
AC055716.3-201ENST00000547533 WASHC2AQ641Q2 1341 aa12.58□□□□□ -0.4
AC055716.3-201ENST00000547533 PLEKHG2Q9H7P9 1386 aa12.57□□□□□ -0.4
AC055716.3-201ENST00000547533 GNPATO15228 680 aa12.57□□□□□ -0.4
AC055716.3-201ENST00000547533 HSP90AB1P08238 724 aaKnown RBP12.57□□□□□ -0.4
AC055716.3-201ENST00000547533 ZNF526Q8TF50 670 aaPredicted RBP12.56□□□□□ -0.4
AC055716.3-201ENST00000547533 TIMELESSQ9UNS1 1208 aa12.56□□□□□ -0.4
AC055716.3-201ENST00000547533 NCAPD2Q15021 1401 aa12.55□□□□□ -0.4
AC055716.3-201ENST00000547533 TRAPPC3LQ5T215 181 aa12.55□□□□□ -0.4
AC055716.3-201ENST00000547533 POLR3GLQ9BT43 218 aa12.55□□□□□ -0.4
AC055716.3-201ENST00000547533 RTCBQ9Y3I0 505 aaKnown RBP12.55□□□□□ -0.4
AC055716.3-201ENST00000547533 PHKG2P15735 406 aa12.54□□□□□ -0.4
AC055716.3-201ENST00000547533 ADRA2BP18089 450 aa12.54□□□□□ -0.4
AC055716.3-201ENST00000547533 NLGN1Q8N2Q7 840 aa12.54□□□□□ -0.4
AC055716.3-201ENST00000547533 LINC00116Q8NCU8 138 aa12.54□□□□□ -0.4
AC055716.3-201ENST00000547533 EYA1Q99502 592 aa12.54□□□□□ -0.4
AC055716.3-201ENST00000547533 CARD14Q9BXL6 1004 aa12.54□□□□□ -0.4
AC055716.3-201ENST00000547533 ZNF831Q5JPB2 1677 aa12.54□□□□□ -0.4
AC055716.3-201ENST00000547533 KIF13BQ9NQT8 1826 aa12.53□□□□□ -0.4
AC055716.3-201ENST00000547533 HSPA6P17066 643 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms