RNA–Protein interactions for RNA: ENST00000547392.5

CACNB3-205, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5 BASIC

Gene CACNB3, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-205ENST00000547392 RPAP2Q8IXW5 612 aaPredicted RBP26.93■■□□□ 1.9
CACNB3-205ENST00000547392 ARHGAP23Q9P227 1491 aa26.93■■□□□ 1.9
CACNB3-205ENST00000547392 CDC45O75419 566 aa26.91■■□□□ 1.9
CACNB3-205ENST00000547392 CIZ1Q9ULV3 898 aaPredicted RBP26.91■■□□□ 1.9
CACNB3-205ENST00000547392 MCM10Q7L590 875 aa26.9■■□□□ 1.9
CACNB3-205ENST00000547392 PLEKHM2Q8IWE5 1019 aa26.9■■□□□ 1.9
CACNB3-205ENST00000547392 L1TD1Q5T7N2 865 aaKnown RBP26.9■■□□□ 1.9
CACNB3-205ENST00000547392 FER1L4A9Z1Z3 1794 aa26.9■■□□□ 1.9
CACNB3-205ENST00000547392 SBNO1A3KN83 1393 aa26.89■■□□□ 1.89
CACNB3-205ENST00000547392 KRT24Q2M2I5 525 aa26.89■■□□□ 1.89
CACNB3-205ENST00000547392 TBX22Q9Y458 520 aa26.89■■□□□ 1.89
CACNB3-205ENST00000547392 EID1Q9Y6B2 187 aa26.89■■□□□ 1.89
CACNB3-205ENST00000547392 RIMS1Q86UR5 1692 aaKnown RBP26.88■■□□□ 1.89
CACNB3-205ENST00000547392 KDRP35968 1356 aa26.88■■□□□ 1.89
CACNB3-205ENST00000547392 FLT4P35916 1363 aa26.87■■□□□ 1.89
CACNB3-205ENST00000547392 MAP3K19Q56UN5 1328 aa26.87■■□□□ 1.89
CACNB3-205ENST00000547392 RTL1A6NKG5 1358 aa26.86■■□□□ 1.89
CACNB3-205ENST00000547392 DIP2AQ14689 1571 aa26.86■■□□□ 1.89
CACNB3-205ENST00000547392 GSPT1P15170 499 aaKnown RBP26.86■■□□□ 1.89
CACNB3-205ENST00000547392 CEP85Q6P2H3 762 aa26.86■■□□□ 1.89
CACNB3-205ENST00000547392 AMOTL2Q9Y2J4 779 aa26.86■■□□□ 1.89
CACNB3-205ENST00000547392 NUTM2FA1L443 756 aa26.85■■□□□ 1.89
CACNB3-205ENST00000547392 TTC22Q5TAA0 569 aa26.85■■□□□ 1.89
CACNB3-205ENST00000547392 SLC26A8Q96RN1 970 aa26.84■■□□□ 1.89
CACNB3-205ENST00000547392 DDX11L8A8MPP1 907 aa26.84■■□□□ 1.89
CACNB3-205ENST00000547392 DNAJC5Q9H3Z4 198 aa26.84■■□□□ 1.89
CACNB3-205ENST00000547392 MSH6P52701 1360 aa26.83■■□□□ 1.89
CACNB3-205ENST00000547392 HSP90AB1P08238 724 aaKnown RBP26.83■■□□□ 1.89
CACNB3-205ENST00000547392 IGSF1Q8N6C5 1336 aa26.82■■□□□ 1.88
CACNB3-205ENST00000547392 MTHFSDQ2M296 383 aaKnown RBP26.82■■□□□ 1.88
CACNB3-205ENST00000547392 RTN4Q9NQC3 1192 aaKnown RBP26.82■■□□□ 1.88
CACNB3-205ENST00000547392 FSD2A1L4K1 749 aa26.81■■□□□ 1.88
CACNB3-205ENST00000547392 PIK3C2AO00443 1686 aa26.8■■□□□ 1.88
CACNB3-205ENST00000547392 HTATSF1O43719 755 aaKnown RBP26.8■■□□□ 1.88
CACNB3-205ENST00000547392 TRAK2O60296 914 aa26.8■■□□□ 1.88
CACNB3-205ENST00000547392 RGPD8O14715 1765 aaPredicted RBP26.8■■□□□ 1.88
CACNB3-205ENST00000547392 K7ELQ4 463 aaPredicted RBP26.8■■□□□ 1.88
CACNB3-205ENST00000547392 GAS2L2Q8NHY3 880 aa26.8■■□□□ 1.88
CACNB3-205ENST00000547392 RTF1Q92541 710 aaKnown RBP26.8■■□□□ 1.88
CACNB3-205ENST00000547392 LRRC37A3O60309 1634 aa26.79■■□□□ 1.88
CACNB3-205ENST00000547392 SLC4A2P04920 1241 aa26.79■■□□□ 1.88
CACNB3-205ENST00000547392 USP54Q70EL1 1684 aa26.79■■□□□ 1.88
CACNB3-205ENST00000547392 XRN1Q8IZH2 1706 aaKnown RBP26.79■■□□□ 1.88
CACNB3-205ENST00000547392 ANKARQ7Z5J8 1434 aa26.78■■□□□ 1.88
CACNB3-205ENST00000547392 RAB3GAP1Q15042 981 aa26.78■■□□□ 1.88
CACNB3-205ENST00000547392 MEIS3Q99687 375 aa26.78■■□□□ 1.88
CACNB3-205ENST00000547392 TSPYL4Q9UJ04 414 aa26.77■■□□□ 1.88
CACNB3-205ENST00000547392 CEP170BQ9Y4F5 1589 aaPredicted RBP26.77■■□□□ 1.88
CACNB3-205ENST00000547392 FOXO3O43524 673 aa26.76■■□□□ 1.87
CACNB3-205ENST00000547392 CCT4P50991 539 aaKnown RBP26.76■■□□□ 1.87
CACNB3-205ENST00000547392 NGDNQ8NEJ9 315 aaKnown RBP26.76■■□□□ 1.87
CACNB3-205ENST00000547392 EYA1Q99502 592 aa26.76■■□□□ 1.87
CACNB3-205ENST00000547392 CD2BP2O95400 341 aaKnown RBP26.75■■□□□ 1.87
CACNB3-205ENST00000547392 C16orf71Q8IYS4 520 aaPredicted RBP26.75■■□□□ 1.87
CACNB3-205ENST00000547392 TNPO1Q92973 898 aaKnown RBP26.75■■□□□ 1.87
CACNB3-205ENST00000547392 HMMRO75330 724 aa26.74■■□□□ 1.87
CACNB3-205ENST00000547392 GOLGA6L3A6NEY3 463 aa26.74■■□□□ 1.87
CACNB3-205ENST00000547392 SOX12O15370 315 aa26.74■■□□□ 1.87
CACNB3-205ENST00000547392 AMPHP49418 695 aa26.74■■□□□ 1.87
CACNB3-205ENST00000547392 RABEP1Q15276 862 aa26.74■■□□□ 1.87
CACNB3-205ENST00000547392 FAM43AQ8N2R8 423 aa26.74■■□□□ 1.87
CACNB3-205ENST00000547392 MARF1Q9Y4F3 1742 aaKnown RBP26.73■■□□□ 1.87
CACNB3-205ENST00000547392 PTMSP20962 102 aa26.73■■□□□ 1.87
CACNB3-205ENST00000547392 GBP4Q96PP9 640 aa26.73■■□□□ 1.87
CACNB3-205ENST00000547392 USP26Q9BXU7 913 aa26.73■■□□□ 1.87
CACNB3-205ENST00000547392 MIS18AQ9NYP9 233 aa26.73■■□□□ 1.87
CACNB3-205ENST00000547392 SOS1Q07889 1333 aaPredicted RBP26.72■■□□□ 1.87
CACNB3-205ENST00000547392 THEMISQ8N1K5 641 aaPredicted RBP26.71■■□□□ 1.87
CACNB3-205ENST00000547392 RBM42Q9BTD8 480 aaKnown RBP26.71■■□□□ 1.87
CACNB3-205ENST00000547392 G2E3Q7L622 706 aa26.71■■□□□ 1.87
CACNB3-205ENST00000547392 CACNA1FO60840 1977 aa26.71■■□□□ 1.87
CACNB3-205ENST00000547392 OTUD7AQ8TE49 926 aaPredicted RBP26.7■■□□□ 1.87
CACNB3-205ENST00000547392 OSBPL3Q9H4L5 887 aa26.7■■□□□ 1.87
CACNB3-205ENST00000547392 SDSP20132 328 aa26.7■■□□□ 1.86
CACNB3-205ENST00000547392 NWD1Q149M9 1564 aa26.7■■□□□ 1.86
CACNB3-205ENST00000547392 ISY1Q9ULR0 285 aaKnown RBP26.69■■□□□ 1.86
CACNB3-205ENST00000547392 FAM208AQ9UK61 1670 aaKnown RBP26.69■■□□□ 1.86
CACNB3-205ENST00000547392 BABAM1Q9NWV8 329 aa26.69■■□□□ 1.86
CACNB3-205ENST00000547392 HSP90AA1P07900 732 aaKnown RBP26.68■■□□□ 1.86
CACNB3-205ENST00000547392 CASC1Q6TDU7 716 aa26.68■■□□□ 1.86
CACNB3-205ENST00000547392 CLEC17AQ6ZS10 378 aa26.68■■□□□ 1.86
CACNB3-205ENST00000547392 XRCC6P12956 609 aaKnown RBP eCLIP26.67■■□□□ 1.86
CACNB3-205ENST00000547392 SMARCA5O60264 1052 aaPredicted RBP26.67■■□□□ 1.86
CACNB3-205ENST00000547392 STK31Q9BXU1 1019 aa26.67■■□□□ 1.86
CACNB3-205ENST00000547392 N4BP2Q86UW6 1770 aaPredicted RBP26.67■■□□□ 1.86
CACNB3-205ENST00000547392 SKOR2Q2VWA4 1001 aaPredicted RBP26.66■■□□□ 1.86
CACNB3-205ENST00000547392 GNAT3A8MTJ3 354 aa26.66■■□□□ 1.86
CACNB3-205ENST00000547392 HOXC9P31274 260 aa26.66■■□□□ 1.86
CACNB3-205ENST00000547392 NLRP6P59044 892 aa26.66■■□□□ 1.86
CACNB3-205ENST00000547392 GNAI2P04899 355 aa26.65■■□□□ 1.86
CACNB3-205ENST00000547392 CCDC30Q5VVM6 783 aa26.65■■□□□ 1.86
CACNB3-205ENST00000547392 GZF1Q9H116 711 aaPredicted RBP26.65■■□□□ 1.86
CACNB3-205ENST00000547392 F6X3S4 739 aa26.65■■□□□ 1.86
CACNB3-205ENST00000547392 SLC4A10Q6U841 1118 aa26.63■■□□□ 1.85
CACNB3-205ENST00000547392 MRE11P49959 708 aa26.63■■□□□ 1.85
CACNB3-205ENST00000547392 MAP3K5Q99683 1374 aa26.62■■□□□ 1.85
CACNB3-205ENST00000547392 REC8O95072 547 aa26.62■■□□□ 1.85
CACNB3-205ENST00000547392 GNAI3P08754 354 aa26.62■■□□□ 1.85
CACNB3-205ENST00000547392 FLIIQ13045 1269 aa26.61■■□□□ 1.85
CACNB3-205ENST00000547392 PXDNLA1KZ92 1463 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms