RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 AGBL1Q96MI9 1066 aa6.19□□□□□ -1.42
UBE4A-203ENST00000545354 MFRPQ9BY79 579 aa6.19□□□□□ -1.42
UBE4A-203ENST00000545354 IQCGQ9H095 443 aaKnown RBP6.19□□□□□ -1.42
UBE4A-203ENST00000545354 CXorf56Q9H5V9 222 aa6.19□□□□□ -1.42
UBE4A-203ENST00000545354 CCDC189A1A4V9 331 aa6.19□□□□□ -1.42
UBE4A-203ENST00000545354 FSD2A1L4K1 749 aa6.19□□□□□ -1.42
UBE4A-203ENST00000545354 CCDC175P0C221 793 aa6.19□□□□□ -1.42
UBE4A-203ENST00000545354 NLRP6P59044 892 aa6.19□□□□□ -1.42
UBE4A-203ENST00000545354 ZSCAN26Q16670 478 aa6.19□□□□□ -1.42
UBE4A-203ENST00000545354 NOM1Q5C9Z4 860 aaKnown RBP6.19□□□□□ -1.42
UBE4A-203ENST00000545354 EP400NLQ6ZTU2 488 aa6.19□□□□□ -1.42
UBE4A-203ENST00000545354 NUTM1Q86Y26 1132 aa6.19□□□□□ -1.42
UBE4A-203ENST00000545354 SAMD3Q8N6K7 520 aa6.19□□□□□ -1.42
UBE4A-203ENST00000545354 AGAP3Q96P47 875 aa6.19□□□□□ -1.42
UBE4A-203ENST00000545354 TMEM121BQ9BXQ6 578 aaPredicted RBP6.19□□□□□ -1.42
UBE4A-203ENST00000545354 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.19□□□□□ -1.42
UBE4A-203ENST00000545354 SWAP70Q9UH65 585 aa6.19□□□□□ -1.42
UBE4A-203ENST00000545354 BOLA1Q9Y3E2 137 aa6.19□□□□□ -1.42
UBE4A-203ENST00000545354 UQCRHLA0A096LP55 91 aa6.18□□□□□ -1.42
UBE4A-203ENST00000545354 UQCRHP07919 91 aa6.18□□□□□ -1.42
UBE4A-203ENST00000545354 CATIPQ7Z7H3 387 aa6.18□□□□□ -1.42
UBE4A-203ENST00000545354 SLAIN1Q8ND83 568 aa6.18□□□□□ -1.42
UBE4A-203ENST00000545354 BHMTQ93088 406 aa6.18□□□□□ -1.42
UBE4A-203ENST00000545354 CHMP4CQ96CF2 233 aa6.18□□□□□ -1.42
UBE4A-203ENST00000545354 SENP7Q9BQF6 1050 aa6.18□□□□□ -1.42
UBE4A-203ENST00000545354 ERBB3P21860 1342 aa6.18□□□□□ -1.42
UBE4A-203ENST00000545354 CAPN2P17655 700 aa6.17□□□□□ -1.42
UBE4A-203ENST00000545354 GSCP56915 257 aaPredicted RBP6.17□□□□□ -1.42
UBE4A-203ENST00000545354 PDCD2Q16342 344 aaPredicted RBP6.17□□□□□ -1.42
UBE4A-203ENST00000545354 AMOTQ4VCS5 1084 aa6.17□□□□□ -1.42
UBE4A-203ENST00000545354 PDILTQ8N807 584 aa6.17□□□□□ -1.42
UBE4A-203ENST00000545354 ARPC5LQ9BPX5 153 aa6.17□□□□□ -1.42
UBE4A-203ENST00000545354 WWC3Q9ULE0 1092 aa6.17□□□□□ -1.42
UBE4A-203ENST00000545354 NBPF7P0C2Y1 421 aaPredicted RBP6.17□□□□□ -1.42
UBE4A-203ENST00000545354 CHGAP10645 457 aaKnown RBP6.17□□□□□ -1.42
UBE4A-203ENST00000545354 SRPK2P78362 688 aaKnown RBP6.17□□□□□ -1.42
UBE4A-203ENST00000545354 TSR1Q2NL82 804 aaKnown RBP6.17□□□□□ -1.42
UBE4A-203ENST00000545354 PIK3R5Q8WYR1 880 aa6.17□□□□□ -1.42
UBE4A-203ENST00000545354 PRIMPOLQ96LW4 560 aa6.17□□□□□ -1.42
UBE4A-203ENST00000545354 LZTS2Q9BRK4 669 aa6.17□□□□□ -1.42
UBE4A-203ENST00000545354 NOL10Q9BSC4 688 aaKnown RBP6.17□□□□□ -1.42
UBE4A-203ENST00000545354 C22orf23Q9BZE7 217 aa6.17□□□□□ -1.42
UBE4A-203ENST00000545354 RSPH9Q9H1X1 276 aaPredicted RBP6.17□□□□□ -1.42
UBE4A-203ENST00000545354 OGFRQ9NZT2 677 aa6.17□□□□□ -1.42
UBE4A-203ENST00000545354 NPHP1O15259 732 aa6.16□□□□□ -1.42
UBE4A-203ENST00000545354 PAX3P23760 479 aa6.16□□□□□ -1.42
UBE4A-203ENST00000545354 C17orf50Q8WW18 174 aa6.16□□□□□ -1.42
UBE4A-203ENST00000545354 VEZTQ9HBM0 779 aa6.16□□□□□ -1.42
UBE4A-203ENST00000545354 CCT2P78371 535 aaKnown RBP6.16□□□□□ -1.42
UBE4A-203ENST00000545354 CCDC173Q0VFZ6 552 aa6.16□□□□□ -1.42
UBE4A-203ENST00000545354 CHAF1AQ13111 956 aaPredicted RBP6.16□□□□□ -1.42
UBE4A-203ENST00000545354 WWC2Q6AWC2 1192 aa6.16□□□□□ -1.42
UBE4A-203ENST00000545354 C3orf67Q6ZVT6 689 aa6.16□□□□□ -1.42
UBE4A-203ENST00000545354 FILIP1Q7Z7B0 1213 aa6.16□□□□□ -1.42
UBE4A-203ENST00000545354 SMCR8Q8TEV9 937 aaPredicted RBP6.16□□□□□ -1.42
UBE4A-203ENST00000545354 CCDC102AQ96A19 550 aa6.16□□□□□ -1.42
UBE4A-203ENST00000545354 AK7Q96M32 723 aa6.16□□□□□ -1.42
UBE4A-203ENST00000545354 ZNF396Q96N95 335 aaPredicted RBP6.16□□□□□ -1.42
UBE4A-203ENST00000545354 G3V3G9 751 aa6.15□□□□□ -1.42
UBE4A-203ENST00000545354 WDHD1O75717 1129 aaPredicted RBP6.15□□□□□ -1.42
UBE4A-203ENST00000545354 XRCC6P12956 609 aaKnown RBP eCLIP6.15□□□□□ -1.42
UBE4A-203ENST00000545354 RASA3Q14644 834 aa6.15□□□□□ -1.42
UBE4A-203ENST00000545354 RABEP1Q15276 862 aa6.15□□□□□ -1.42
UBE4A-203ENST00000545354 LMOD2Q6P5Q4 547 aa6.15□□□□□ -1.42
UBE4A-203ENST00000545354 TAX1BP1Q86VP1 789 aa6.15□□□□□ -1.42
UBE4A-203ENST00000545354 KIF2CQ99661 725 aa6.15□□□□□ -1.42
UBE4A-203ENST00000545354 ETAA1Q9NY74 926 aa6.15□□□□□ -1.42
UBE4A-203ENST00000545354 TBC1D2BQ9UPU7 963 aa6.15□□□□□ -1.42
UBE4A-203ENST00000545354 PEG3Q9GZU2 1588 aa6.15□□□□□ -1.43
UBE4A-203ENST00000545354 RAB11FIP3O75154 756 aa6.14□□□□□ -1.43
UBE4A-203ENST00000545354 BAG4O95429 457 aaKnown RBP6.14□□□□□ -1.43
UBE4A-203ENST00000545354 SESN3P58005 492 aa6.14□□□□□ -1.43
UBE4A-203ENST00000545354 IFT88Q13099 833 aa6.14□□□□□ -1.43
UBE4A-203ENST00000545354 AP1ARQ63HQ0 302 aa6.14□□□□□ -1.43
UBE4A-203ENST00000545354 NLRP13Q86W25 1043 aa6.14□□□□□ -1.43
UBE4A-203ENST00000545354 IQCF2Q8IXL9 164 aa6.14□□□□□ -1.43
UBE4A-203ENST00000545354 TEKT1Q969V4 418 aa6.14□□□□□ -1.43
UBE4A-203ENST00000545354 EVI5LQ96CN4 794 aa6.14□□□□□ -1.43
UBE4A-203ENST00000545354 SPOCK3Q9BQ16 436 aa6.14□□□□□ -1.43
UBE4A-203ENST00000545354 WDR70Q9NW82 654 aa6.14□□□□□ -1.43
UBE4A-203ENST00000545354 RSPH14Q9UHP6 348 aa6.14□□□□□ -1.43
UBE4A-203ENST00000545354 FBXO9Q9UK97 447 aaPredicted RBP6.14□□□□□ -1.43
UBE4A-203ENST00000545354 THRAP3Q9Y2W1 955 aaKnown RBP6.14□□□□□ -1.43
UBE4A-203ENST00000545354 ARAP1Q96P48 1450 aa6.14□□□□□ -1.43
UBE4A-203ENST00000545354 CEP164Q9UPV0 1460 aa6.14□□□□□ -1.43
UBE4A-203ENST00000545354 TCF3P15923 654 aa6.14□□□□□ -1.43
UBE4A-203ENST00000545354 KCNA2P16389 499 aa6.14□□□□□ -1.43
UBE4A-203ENST00000545354 NAT1P18440 290 aa6.14□□□□□ -1.43
UBE4A-203ENST00000545354 EIF5P55010 431 aaKnown RBP6.14□□□□□ -1.43
UBE4A-203ENST00000545354 RWDD2BP57060 319 aa6.14□□□□□ -1.43
UBE4A-203ENST00000545354 BMS1Q14692 1282 aaKnown RBP6.14□□□□□ -1.43
UBE4A-203ENST00000545354 TTLL5Q6EMB2 1281 aa6.14□□□□□ -1.43
UBE4A-203ENST00000545354 BARGINQ6ZT62 677 aa6.14□□□□□ -1.43
UBE4A-203ENST00000545354 MICALL2Q8IY33 904 aa6.14□□□□□ -1.43
UBE4A-203ENST00000545354 GBP4Q96PP9 640 aa6.14□□□□□ -1.43
UBE4A-203ENST00000545354 GOPCQ9HD26 462 aa6.14□□□□□ -1.43
UBE4A-203ENST00000545354 CDKL5O76039 1030 aa6.13□□□□□ -1.43
UBE4A-203ENST00000545354 TRPC1P48995 793 aa6.13□□□□□ -1.43
UBE4A-203ENST00000545354 LCA5Q86VQ0 697 aa6.13□□□□□ -1.43
UBE4A-203ENST00000545354 CCAR1Q8IX12 1150 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms