RNA–Protein interactions for RNA: ENST00000545210.5

TMEM258-208, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-208ENST00000545210 SLC12A5Q9H2X9 1139 aa16.39■□□□□ 0.21
TMEM258-208ENST00000545210 C5P01031 1676 aa16.38■□□□□ 0.21
TMEM258-208ENST00000545210 PRIM1P49642 420 aaKnown RBP16.38■□□□□ 0.21
TMEM258-208ENST00000545210 ANKRD36BQ8N2N9 1353 aa16.38■□□□□ 0.21
TMEM258-208ENST00000545210 IP6K1Q92551 441 aa16.37■□□□□ 0.21
TMEM258-208ENST00000545210 TAF1LQ8IZX4 1826 aa16.37■□□□□ 0.21
TMEM258-208ENST00000545210 A0A1W2PP64 1363 aa16.37■□□□□ 0.21
TMEM258-208ENST00000545210 NSD2O96028 1365 aa16.36■□□□□ 0.21
TMEM258-208ENST00000545210 MSH5O43196 834 aa16.35■□□□□ 0.21
TMEM258-208ENST00000545210 YBX3P16989 372 aaKnown RBP eCLIP16.35■□□□□ 0.216e-35■□□□□ 10.3
TMEM258-208ENST00000545210 TERF2IPQ9NYB0 399 aa16.35■□□□□ 0.21
TMEM258-208ENST00000545210 IFFO2Q5TF58 517 aa16.33■□□□□ 0.2
TMEM258-208ENST00000545210 CARD11Q9BXL7 1154 aa16.33■□□□□ 0.2
TMEM258-208ENST00000545210 CCNL1Q9UK58 526 aaPredicted RBP16.33■□□□□ 0.2
TMEM258-208ENST00000545210 MEGF6O75095 1541 aa16.33■□□□□ 0.2
TMEM258-208ENST00000545210 GRIN3BO60391 1043 aa16.32■□□□□ 0.2
TMEM258-208ENST00000545210 COL23A1Q86Y22 540 aaPredicted RBP16.32■□□□□ 0.2
TMEM258-208ENST00000545210 ZCRB1Q8TBF4 217 aaKnown RBP16.32■□□□□ 0.2
TMEM258-208ENST00000545210 ITGB4P16144 1822 aa16.31■□□□□ 0.2
TMEM258-208ENST00000545210 MAP3K19Q56UN5 1328 aa16.31■□□□□ 0.2
TMEM258-208ENST00000545210 MSL1Q68DK7 614 aa16.31■□□□□ 0.2
TMEM258-208ENST00000545210 USP47Q96K76 1375 aa16.3■□□□□ 0.2
TMEM258-208ENST00000545210 FBLN1P23142 703 aa16.3■□□□□ 0.2
TMEM258-208ENST00000545210 HOXC9P31274 260 aa16.3■□□□□ 0.2
TMEM258-208ENST00000545210 ATP10DQ9P241 1426 aa16.29■□□□□ 0.2
TMEM258-208ENST00000545210 AMPHP49418 695 aa16.29■□□□□ 0.2
TMEM258-208ENST00000545210 COG3Q96JB2 828 aa16.28■□□□□ 0.2
TMEM258-208ENST00000545210 UBR3Q6ZT12 1888 aa16.27■□□□□ 0.2
TMEM258-208ENST00000545210 TOGARAM1Q9Y4F4 1720 aa16.27■□□□□ 0.19
TMEM258-208ENST00000545210 C4BP0C0L5 1744 aa16.26■□□□□ 0.19
TMEM258-208ENST00000545210 USHBP1Q8N6Y0 703 aa16.26■□□□□ 0.19
TMEM258-208ENST00000545210 KIF20BQ96Q89 1820 aa16.25■□□□□ 0.19
TMEM258-208ENST00000545210 NBPF6Q5VWK0 638 aa16.25■□□□□ 0.19
TMEM258-208ENST00000545210 NBPF4Q96M43 638 aa16.25■□□□□ 0.19
TMEM258-208ENST00000545210 PUS7Q96PZ0 661 aaKnown RBP16.25■□□□□ 0.19
TMEM258-208ENST00000545210 CD2APQ9Y5K6 639 aa16.25■□□□□ 0.19
TMEM258-208ENST00000545210 GPBP1L1Q9HC44 474 aaPredicted RBP16.24■□□□□ 0.19
TMEM258-208ENST00000545210 RTL1A6NKG5 1358 aa16.24■□□□□ 0.19
TMEM258-208ENST00000545210 RRS1Q15050 365 aaKnown RBP16.23■□□□□ 0.19
TMEM258-208ENST00000545210 ZNF526Q8TF50 670 aaPredicted RBP16.23■□□□□ 0.19
TMEM258-208ENST00000545210 RAPGEF4Q8WZA2 1011 aa16.23■□□□□ 0.19
TMEM258-208ENST00000545210 CGNL1Q0VF96 1302 aa16.22■□□□□ 0.19
TMEM258-208ENST00000545210 ADCY9O60503 1353 aa16.22■□□□□ 0.19
TMEM258-208ENST00000545210 PALLDQ8WX93 1383 aa16.22■□□□□ 0.19
TMEM258-208ENST00000545210 PKD1L3Q7Z443 1732 aa16.22■□□□□ 0.19
TMEM258-208ENST00000545210 SMG6Q86US8 1419 aaKnown RBP16.21■□□□□ 0.19
TMEM258-208ENST00000545210 FLAD1Q8NFF5 587 aa16.21■□□□□ 0.19
TMEM258-208ENST00000545210 MAP2P11137 1827 aaKnown RBP16.2■□□□□ 0.18
TMEM258-208ENST00000545210 TATP17735 454 aaPredicted RBP16.2■□□□□ 0.18
TMEM258-208ENST00000545210 MPRIPQ6WCQ1 1025 aa16.2■□□□□ 0.18
TMEM258-208ENST00000545210 TESK2Q96S53 571 aa16.2■□□□□ 0.18
TMEM258-208ENST00000545210 WWC3Q9ULE0 1092 aa16.2■□□□□ 0.18
TMEM258-208ENST00000545210 PCDH11XQ9BZA7 1347 aa16.19■□□□□ 0.18
TMEM258-208ENST00000545210 PCDH11YQ9BZA8 1340 aa16.19■□□□□ 0.18
TMEM258-208ENST00000545210 HSPA6P17066 643 aa16.19■□□□□ 0.18
TMEM258-208ENST00000545210 AMIGO3Q86WK7 504 aa16.19■□□□□ 0.18
TMEM258-208ENST00000545210 ST20-MTHFSA0A0A6YYL1 179 aa16.18■□□□□ 0.18
TMEM258-208ENST00000545210 SMIM5Q71RC9 77 aa16.18■□□□□ 0.18
TMEM258-208ENST00000545210 GGNBP2Q9H3C7 697 aa16.18■□□□□ 0.18
TMEM258-208ENST00000545210 IGSF1Q8N6C5 1336 aa16.18■□□□□ 0.18
TMEM258-208ENST00000545210 FYB1O15117 783 aa16.17■□□□□ 0.18
TMEM258-208ENST00000545210 PHF14O94880 888 aa16.17■□□□□ 0.18
TMEM258-208ENST00000545210 HMGB2P26583 209 aaKnown RBP16.17■□□□□ 0.18
TMEM258-208ENST00000545210 HSP90AB2PQ58FF8 381 aa16.17■□□□□ 0.18
TMEM258-208ENST00000545210 AK7Q96M32 723 aa16.17■□□□□ 0.18
TMEM258-208ENST00000545210 N4BP2Q86UW6 1770 aaPredicted RBP16.17■□□□□ 0.18
TMEM258-208ENST00000545210 TONSLQ96HA7 1378 aa16.16■□□□□ 0.18
TMEM258-208ENST00000545210 CYP27B1O15528 508 aa16.16■□□□□ 0.18
TMEM258-208ENST00000545210 KIF13BQ9NQT8 1826 aa16.16■□□□□ 0.18
TMEM258-208ENST00000545210 INSRP06213 1382 aa16.15■□□□□ 0.18
TMEM258-208ENST00000545210 KIAA1551Q9HCM1 1747 aa16.15■□□□□ 0.18
TMEM258-208ENST00000545210 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.14■□□□□ 0.17
TMEM258-208ENST00000545210 SMARCC1Q92922 1105 aaPredicted RBP16.14■□□□□ 0.17
TMEM258-208ENST00000545210 FLT4P35916 1363 aa16.13■□□□□ 0.17
TMEM258-208ENST00000545210 NSD3Q9BZ95 1437 aa16.13■□□□□ 0.17
TMEM258-208ENST00000545210 CICQ96RK0 1608 aaPredicted RBP16.13■□□□□ 0.17
TMEM258-208ENST00000545210 ANKRD26Q9UPS8 1709 aa16.13■□□□□ 0.17
TMEM258-208ENST00000545210 PIGBQ92521 554 aa16.12■□□□□ 0.17
TMEM258-208ENST00000545210 SLC24A1O60721 1099 aa16.11■□□□□ 0.17
TMEM258-208ENST00000545210 SSFA2P28290 1259 aa16.11■□□□□ 0.17
TMEM258-208ENST00000545210 LINC00116Q8NCU8 138 aa16.11■□□□□ 0.17
TMEM258-208ENST00000545210 BRCA1P38398 1863 aaKnown RBP16.1■□□□□ 0.17
TMEM258-208ENST00000545210 KIF3CO14782 793 aa16.1■□□□□ 0.17
TMEM258-208ENST00000545210 KIF24Q5T7B8 1368 aa16.1■□□□□ 0.17
TMEM258-208ENST00000545210 LOC102724428A0A0B4J2F2 783 aa16.09■□□□□ 0.17
TMEM258-208ENST00000545210 SIK1P57059 783 aa16.09■□□□□ 0.17
TMEM258-208ENST00000545210 GNPATO15228 680 aa16.08■□□□□ 0.16
TMEM258-208ENST00000545210 NKX1-1Q15270 411 aaPredicted RBP16.08■□□□□ 0.16
TMEM258-208ENST00000545210 EMILIN1Q9Y6C2 1016 aa16.08■□□□□ 0.16
TMEM258-208ENST00000545210 NCAPD2Q15021 1401 aa16.08■□□□□ 0.16
TMEM258-208ENST00000545210 TMF1P82094 1093 aa16.07■□□□□ 0.16
TMEM258-208ENST00000545210 ITPK1Q13572 414 aa16.07■□□□□ 0.16
TMEM258-208ENST00000545210 ASAP1Q9ULH1 1129 aa16.07■□□□□ 0.16
TMEM258-208ENST00000545210 SPG7Q9UQ90 795 aa16.07■□□□□ 0.16
TMEM258-208ENST00000545210 PXDNLA1KZ92 1463 aa16.07■□□□□ 0.16
TMEM258-208ENST00000545210 COL5A3P25940 1745 aaPredicted RBP16.07■□□□□ 0.16
TMEM258-208ENST00000545210 WDR90Q96KV7 1748 aa16.06■□□□□ 0.16
TMEM258-208ENST00000545210 PPM1GO15355 546 aaPredicted RBP16.06■□□□□ 0.16
TMEM258-208ENST00000545210 MMP10P09238 476 aa16.06■□□□□ 0.16
TMEM258-208ENST00000545210 TMOD3Q9NYL9 352 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms