RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 TRIM34Q9BYJ4 488 aa9.39□□□□□ -0.91
CPSF7-222ENST00000544585 PPP1R12CQ9BZL4 782 aa9.39□□□□□ -0.91
CPSF7-222ENST00000544585 SLAIN2Q9P270 581 aa9.39□□□□□ -0.91
CPSF7-222ENST00000544585 EHBP1L1Q8N3D4 1523 aa9.39□□□□□ -0.91
CPSF7-222ENST00000544585 TMEM94Q12767 1356 aa9.38□□□□□ -0.91
CPSF7-222ENST00000544585 C6orf229H3BNL8 230 aa9.38□□□□□ -0.91
CPSF7-222ENST00000544585 BRD1O95696 1058 aa9.38□□□□□ -0.91
CPSF7-222ENST00000544585 SLC10A3P09131 477 aa9.38□□□□□ -0.91
CPSF7-222ENST00000544585 SWT1Q5T5J6 900 aaKnown RBP9.38□□□□□ -0.91
CPSF7-222ENST00000544585 ZNF772Q68DY9 489 aaPredicted RBP9.38□□□□□ -0.91
CPSF7-222ENST00000544585 LRRN4Q8WUT4 740 aa9.38□□□□□ -0.91
CPSF7-222ENST00000544585 HLA-CQ95604 372 aa9.38□□□□□ -0.91
CPSF7-222ENST00000544585 ERVK-7P63135 1459 aa9.38□□□□□ -0.91
CPSF7-222ENST00000544585 NCOA2Q15596 1464 aa9.38□□□□□ -0.91
CPSF7-222ENST00000544585 RNF17Q9BXT8 1623 aaKnown RBP9.38□□□□□ -0.91
CPSF7-222ENST00000544585 TMEM2Q9UHN6 1383 aa9.37□□□□□ -0.91
CPSF7-222ENST00000544585 CAMSAP2Q08AD1 1489 aa9.37□□□□□ -0.91
CPSF7-222ENST00000544585 ARHGAP23Q9P227 1491 aa9.37□□□□□ -0.91
CPSF7-222ENST00000544585 KCNA1Q09470 495 aa9.37□□□□□ -0.91
CPSF7-222ENST00000544585 IDI1Q13907 227 aa9.37□□□□□ -0.91
CPSF7-222ENST00000544585 SLC26A8Q96RN1 970 aa9.37□□□□□ -0.91
CPSF7-222ENST00000544585 SCUBE2Q9NQ36 999 aa9.37□□□□□ -0.91
CPSF7-222ENST00000544585 ARHGAP31Q2M1Z3 1444 aa9.37□□□□□ -0.91
CPSF7-222ENST00000544585 SYNMO15061 1565 aa9.37□□□□□ -0.91
CPSF7-222ENST00000544585 SLIT1O75093 1534 aa9.36□□□□□ -0.91
CPSF7-222ENST00000544585 RGS22Q8NE09 1264 aa9.36□□□□□ -0.91
CPSF7-222ENST00000544585 ALG2Q9H553 416 aa9.36□□□□□ -0.91
CPSF7-222ENST00000544585 SLC52A1Q9NWF4 448 aa9.36□□□□□ -0.91
CPSF7-222ENST00000544585 JCADQ9P266 1359 aa9.36□□□□□ -0.91
CPSF7-222ENST00000544585 ABCC3O15438 1527 aa9.36□□□□□ -0.91
CPSF7-222ENST00000544585 STRCP1A6NGW2 1772 aa9.35□□□□□ -0.91
CPSF7-222ENST00000544585 PALM3A6NDB9 673 aaPredicted RBP9.35□□□□□ -0.91
CPSF7-222ENST00000544585 CFAP99D6REC4 459 aa9.35□□□□□ -0.91
CPSF7-222ENST00000544585 LMOD1P29536 600 aaPredicted RBP9.35□□□□□ -0.91
CPSF7-222ENST00000544585 SOX11P35716 441 aa9.35□□□□□ -0.91
CPSF7-222ENST00000544585 ARHGEF5Q12774 1597 aa9.35□□□□□ -0.91
CPSF7-222ENST00000544585 MTMR7Q9Y216 660 aa9.35□□□□□ -0.91
CPSF7-222ENST00000544585 MSH6P52701 1360 aa9.35□□□□□ -0.91
CPSF7-222ENST00000544585 KANK1Q14678 1352 aa9.35□□□□□ -0.91
CPSF7-222ENST00000544585 SNPHO15079 494 aa9.34□□□□□ -0.91
CPSF7-222ENST00000544585 GPR37L1O60883 481 aa9.34□□□□□ -0.91
CPSF7-222ENST00000544585 HOXB1P14653 301 aaPredicted RBP9.34□□□□□ -0.91
CPSF7-222ENST00000544585 SRPK2P78362 688 aaKnown RBP9.34□□□□□ -0.91
CPSF7-222ENST00000544585 PNMA1Q8ND90 353 aa9.34□□□□□ -0.91
CPSF7-222ENST00000544585 ZBED2Q9BTP6 218 aa9.34□□□□□ -0.91
CPSF7-222ENST00000544585 RRP7BPQ9NSQ0 103 aa9.34□□□□□ -0.91
CPSF7-222ENST00000544585 SPATA31A6Q5VVP1 1343 aa9.33□□□□□ -0.92
CPSF7-222ENST00000544585 POTEJP0CG39 1038 aa9.33□□□□□ -0.92
CPSF7-222ENST00000544585 RXRBP28702 533 aa9.33□□□□□ -0.92
CPSF7-222ENST00000544585 FUT2Q10981 343 aa9.33□□□□□ -0.92
CPSF7-222ENST00000544585 SEMA3FQ13275 785 aa9.33□□□□□ -0.92
CPSF7-222ENST00000544585 MEX3CQ5U5Q3 659 aaKnown RBP9.33□□□□□ -0.92
CPSF7-222ENST00000544585 MAMSTRQ6ZN01 415 aa9.33□□□□□ -0.92
CPSF7-222ENST00000544585 TFIP11Q9UBB9 837 aaKnown RBP9.33□□□□□ -0.92
CPSF7-222ENST00000544585 CFAP65Q6ZU64 1925 aaKnown RBP9.33□□□□□ -0.92
CPSF7-222ENST00000544585 MYOM3Q5VTT5 1437 aa9.32□□□□□ -0.92
CPSF7-222ENST00000544585 SLF2Q8IX21 1173 aa9.32□□□□□ -0.92
CPSF7-222ENST00000544585 EPS8L1Q8TE68 723 aa9.32□□□□□ -0.92
CPSF7-222ENST00000544585 RABGEF1Q9UJ41 708 aa9.32□□□□□ -0.92
CPSF7-222ENST00000544585 TBX22Q9Y458 520 aa9.32□□□□□ -0.92
CPSF7-222ENST00000544585 ZC3H13Q5T200 1668 aaKnown RBP9.32□□□□□ -0.92
CPSF7-222ENST00000544585 ATP6V1AP38606 617 aa9.31□□□□□ -0.92
CPSF7-222ENST00000544585 C19orf44Q9H6X5 657 aa9.31□□□□□ -0.92
CPSF7-222ENST00000544585 SEPT9Q9UHD8 586 aaPredicted RBP9.31□□□□□ -0.92
CPSF7-222ENST00000544585 LRRC9Q6ZRR7 1453 aa9.31□□□□□ -0.92
CPSF7-222ENST00000544585 UBR1Q8IWV7 1749 aa9.31□□□□□ -0.92
CPSF7-222ENST00000544585 DUOX2Q9NRD8 1548 aa9.31□□□□□ -0.92
CPSF7-222ENST00000544585 NCOA3Q9Y6Q9 1424 aa9.31□□□□□ -0.92
CPSF7-222ENST00000544585 MAST1Q9Y2H9 1570 aa9.3□□□□□ -0.92
CPSF7-222ENST00000544585 CFHP08603 1231 aa9.3□□□□□ -0.92
CPSF7-222ENST00000544585 ATF3P18847 181 aa9.3□□□□□ -0.92
CPSF7-222ENST00000544585 NR6A1Q15406 480 aa9.3□□□□□ -0.92
CPSF7-222ENST00000544585 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.3□□□□□ -0.92
CPSF7-222ENST00000544585 PRR7Q8TB68 274 aa9.3□□□□□ -0.92
CPSF7-222ENST00000544585 TRIM52Q96A61 297 aa9.3□□□□□ -0.92
CPSF7-222ENST00000544585 KIF15Q9NS87 1388 aa9.29□□□□□ -0.92
CPSF7-222ENST00000544585 EIF4G2P78344 907 aaKnown RBP eCLIP9.29□□□□□ -0.92
CPSF7-222ENST00000544585 KANK4Q5T7N3 995 aaPredicted RBP9.29□□□□□ -0.92
CPSF7-222ENST00000544585 SP7Q8TDD2 431 aaPredicted RBP9.29□□□□□ -0.92
CPSF7-222ENST00000544585 EIF2AK4Q9P2K8 1649 aaKnown RBP9.29□□□□□ -0.92
CPSF7-222ENST00000544585 PRDM15P57071 1507 aaPredicted RBP9.29□□□□□ -0.92
CPSF7-222ENST00000544585 FAM98CQ17RN3 349 aaKnown RBP9.28□□□□□ -0.92
CPSF7-222ENST00000544585 SYMPKQ92797 1274 aaKnown RBP9.28□□□□□ -0.92
CPSF7-222ENST00000544585 UCN2Q96RP3 112 aa9.28□□□□□ -0.92
CPSF7-222ENST00000544585 TET3O43151 1660 aa9.28□□□□□ -0.92
CPSF7-222ENST00000544585 FGD6Q6ZV73 1430 aa9.28□□□□□ -0.92
CPSF7-222ENST00000544585 ERBINQ96RT1 1412 aa9.28□□□□□ -0.92
CPSF7-222ENST00000544585 EFCAB6Q5THR3 1501 aa9.27□□□□□ -0.93
CPSF7-222ENST00000544585 XIRP1Q702N8 1843 aaKnown RBP9.27□□□□□ -0.93
CPSF7-222ENST00000544585 RNF40O75150 1001 aa9.27□□□□□ -0.93
CPSF7-222ENST00000544585 ATG7O95352 703 aa9.27□□□□□ -0.93
CPSF7-222ENST00000544585 PSEN2P49810 448 aa9.27□□□□□ -0.93
CPSF7-222ENST00000544585 CDCA8Q53HL2 280 aa9.27□□□□□ -0.93
CPSF7-222ENST00000544585 FOXD4L5Q5VV16 416 aaPredicted RBP9.27□□□□□ -0.93
CPSF7-222ENST00000544585 FOXD4L4Q8WXT5 416 aaPredicted RBP9.27□□□□□ -0.93
CPSF7-222ENST00000544585 VRTNQ9H8Y1 702 aa9.27□□□□□ -0.93
CPSF7-222ENST00000544585 NKTRP30414 1462 aaKnown RBP9.27□□□□□ -0.93
CPSF7-222ENST00000544585 ROBO1Q9Y6N7 1651 aa9.26□□□□□ -0.93
CPSF7-222ENST00000544585 CARNS1A5YM72 827 aa9.26□□□□□ -0.93
CPSF7-222ENST00000544585 KMT5BQ4FZB7 885 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms