RNA–Protein interactions for RNA: ENST00000543957.5

ITM2C-209, Transcript of integral membrane protein 2C, humanhuman

TSL 5

Gene ITM2C, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-209ENST00000543957 USP31Q70CQ4 1352 aa17.51■□□□□ 0.39
ITM2C-209ENST00000543957 LY75O60449 1722 aa17.5■□□□□ 0.39
ITM2C-209ENST00000543957 WWC3Q9ULE0 1092 aa17.49■□□□□ 0.39
ITM2C-209ENST00000543957 NME9Q86XW9 330 aa17.48■□□□□ 0.39
ITM2C-209ENST00000543957 USP47Q96K76 1375 aa17.48■□□□□ 0.39
ITM2C-209ENST00000543957 IGSF1Q8N6C5 1336 aa17.47■□□□□ 0.39
ITM2C-209ENST00000543957 CAPN15O75808 1086 aa17.47■□□□□ 0.39
ITM2C-209ENST00000543957 TOMM70O94826 608 aa17.47■□□□□ 0.39
ITM2C-209ENST00000543957 COL13A1Q5TAT6 717 aaPredicted RBP17.47■□□□□ 0.39
ITM2C-209ENST00000543957 FLAD1Q8NFF5 587 aa17.47■□□□□ 0.39
ITM2C-209ENST00000543957 LTN1O94822 1766 aa17.46■□□□□ 0.39
ITM2C-209ENST00000543957 LTV1Q96GA3 475 aaPredicted RBP17.46■□□□□ 0.39
ITM2C-209ENST00000543957 DOT1LQ8TEK3 1739 aa17.45■□□□□ 0.38
ITM2C-209ENST00000543957 HMGB2P26583 209 aaKnown RBP17.44■□□□□ 0.38
ITM2C-209ENST00000543957 ZCRB1Q8TBF4 217 aaKnown RBP17.44■□□□□ 0.38
ITM2C-209ENST00000543957 IP6K1Q92551 441 aa17.44■□□□□ 0.38
ITM2C-209ENST00000543957 USP54Q70EL1 1684 aa17.42■□□□□ 0.38
ITM2C-209ENST00000543957 SBNO2Q9Y2G9 1366 aa17.41■□□□□ 0.38
ITM2C-209ENST00000543957 MON2Q7Z3U7 1717 aa17.41■□□□□ 0.38
ITM2C-209ENST00000543957 PRELPP51888 382 aa17.4■□□□□ 0.38
ITM2C-209ENST00000543957 KLRG1Q96E93 195 aa17.4■□□□□ 0.38
ITM2C-209ENST00000543957 TNS4Q8IZW8 715 aa17.39■□□□□ 0.37
ITM2C-209ENST00000543957 JMYQ8N9B5 988 aa17.39■□□□□ 0.37
ITM2C-209ENST00000543957 C5P01031 1676 aa17.39■□□□□ 0.37
ITM2C-209ENST00000543957 AK7Q96M32 723 aa17.38■□□□□ 0.37
ITM2C-209ENST00000543957 NMRK2Q9NPI5 230 aa17.38■□□□□ 0.37
ITM2C-209ENST00000543957 FAM208AQ9UK61 1670 aaKnown RBP17.37■□□□□ 0.37
ITM2C-209ENST00000543957 HTRA3P83110 453 aa17.37■□□□□ 0.37
ITM2C-209ENST00000543957 HDGFL2Q7Z4V5 671 aaPredicted RBP17.37■□□□□ 0.37
ITM2C-209ENST00000543957 AMIGO3Q86WK7 504 aa17.37■□□□□ 0.37
ITM2C-209ENST00000543957 CD163L1Q9NR16 1453 aa17.37■□□□□ 0.37
ITM2C-209ENST00000543957 MEGF6O75095 1541 aa17.37■□□□□ 0.37
ITM2C-209ENST00000543957 PHF14O94880 888 aa17.36■□□□□ 0.37
ITM2C-209ENST00000543957 RBM46Q8TBY0 533 aaKnown RBP17.36■□□□□ 0.37
ITM2C-209ENST00000543957 TMC1Q8TDI8 760 aa17.36■□□□□ 0.37
ITM2C-209ENST00000543957 PALLDQ8WX93 1383 aa17.36■□□□□ 0.37
ITM2C-209ENST00000543957 CICQ96RK0 1608 aaPredicted RBP17.36■□□□□ 0.37
ITM2C-209ENST00000543957 WDR90Q96KV7 1748 aa17.35■□□□□ 0.37
ITM2C-209ENST00000543957 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.35■□□□□ 0.37
ITM2C-209ENST00000543957 SMIM5Q71RC9 77 aa17.35■□□□□ 0.37
ITM2C-209ENST00000543957 HOXC9P31274 260 aa17.34■□□□□ 0.37
ITM2C-209ENST00000543957 EDC4Q6P2E9 1401 aaKnown RBP17.34■□□□□ 0.37
ITM2C-209ENST00000543957 ROCK2O75116 1388 aaKnown RBP17.33■□□□□ 0.36
ITM2C-209ENST00000543957 MPRIPQ6WCQ1 1025 aa17.33■□□□□ 0.36
ITM2C-209ENST00000543957 C16orf71Q8IYS4 520 aaPredicted RBP17.33■□□□□ 0.36
ITM2C-209ENST00000543957 SLC12A5Q9H2X9 1139 aa17.33■□□□□ 0.36
ITM2C-209ENST00000543957 CGNL1Q0VF96 1302 aa17.32■□□□□ 0.36
ITM2C-209ENST00000543957 MAP3K19Q56UN5 1328 aa17.32■□□□□ 0.36
ITM2C-209ENST00000543957 AMPHP49418 695 aa17.32■□□□□ 0.36
ITM2C-209ENST00000543957 ARHGAP27Q6ZUM4 889 aa17.32■□□□□ 0.36
ITM2C-209ENST00000543957 L3MBTL2Q969R5 705 aa17.32■□□□□ 0.36
ITM2C-209ENST00000543957 BCS1LQ9Y276 419 aa17.32■□□□□ 0.36
ITM2C-209ENST00000543957 TAF1LQ8IZX4 1826 aa17.32■□□□□ 0.36
ITM2C-209ENST00000543957 C4BP0C0L5 1744 aa17.32■□□□□ 0.36
ITM2C-209ENST00000543957 NSD3Q9BZ95 1437 aa17.31■□□□□ 0.36
ITM2C-209ENST00000543957 FSTL1Q12841 308 aa17.31■□□□□ 0.36
ITM2C-209ENST00000543957 RAPGEF4Q8WZA2 1011 aa17.31■□□□□ 0.36
ITM2C-209ENST00000543957 SSFA2P28290 1259 aa17.3■□□□□ 0.36
ITM2C-209ENST00000543957 NBPF6Q5VWK0 638 aa17.3■□□□□ 0.36
ITM2C-209ENST00000543957 SMARCC1Q92922 1105 aaPredicted RBP17.3■□□□□ 0.36
ITM2C-209ENST00000543957 NBPF4Q96M43 638 aa17.3■□□□□ 0.36
ITM2C-209ENST00000543957 TERF2IPQ9NYB0 399 aa17.3■□□□□ 0.36
ITM2C-209ENST00000543957 FBLN1P23142 703 aa17.29■□□□□ 0.36
ITM2C-209ENST00000543957 TGFB2P61812 414 aa17.29■□□□□ 0.36
ITM2C-209ENST00000543957 TOGARAM1Q9Y4F4 1720 aa17.29■□□□□ 0.36
ITM2C-209ENST00000543957 PXDNLA1KZ92 1463 aa17.29■□□□□ 0.36
ITM2C-209ENST00000543957 RGPD2P0DJD1 1756 aa17.28■□□□□ 0.36
ITM2C-209ENST00000543957 MMP10P09238 476 aa17.28■□□□□ 0.36
ITM2C-209ENST00000543957 USHBP1Q8N6Y0 703 aa17.28■□□□□ 0.36
ITM2C-209ENST00000543957 COG3Q96JB2 828 aa17.28■□□□□ 0.36
ITM2C-209ENST00000543957 UBR3Q6ZT12 1888 aa17.28■□□□□ 0.36
ITM2C-209ENST00000543957 A0A1W2PP64 1363 aa17.28■□□□□ 0.36
ITM2C-209ENST00000543957 PCDH11XQ9BZA7 1347 aa17.27■□□□□ 0.36
ITM2C-209ENST00000543957 PCDH11YQ9BZA8 1340 aa17.27■□□□□ 0.36
ITM2C-209ENST00000543957 PCNTO95613 3336 aa17.27■□□□□ 0.36
ITM2C-209ENST00000543957 A0A0G2JLW4 131 aa17.27■□□□□ 0.36
ITM2C-209ENST00000543957 TATP17735 454 aaPredicted RBP17.27■□□□□ 0.36
ITM2C-209ENST00000543957 C9orf131Q5VYM1 1079 aa17.26■□□□□ 0.35
ITM2C-209ENST00000543957 LINC00116Q8NCU8 138 aa17.26■□□□□ 0.35
ITM2C-209ENST00000543957 FCHSD2O94868 740 aa17.25■□□□□ 0.35
ITM2C-209ENST00000543957 LOC102724428A0A0B4J2F2 783 aa17.24■□□□□ 0.35
ITM2C-209ENST00000543957 GNPATO15228 680 aa17.24■□□□□ 0.35
ITM2C-209ENST00000543957 SIK1P57059 783 aa17.24■□□□□ 0.35
ITM2C-209ENST00000543957 PIGBQ92521 554 aa17.24■□□□□ 0.35
ITM2C-209ENST00000543957 PLEKHG2Q9H7P9 1386 aa17.24■□□□□ 0.35
ITM2C-209ENST00000543957 KDM2BQ8NHM5 1336 aa17.23■□□□□ 0.35
ITM2C-209ENST00000543957 CYP27B1O15528 508 aa17.23■□□□□ 0.35
ITM2C-209ENST00000543957 DPEP1P16444 411 aa17.23■□□□□ 0.35
ITM2C-209ENST00000543957 RRAGCQ9HB90 399 aa17.22■□□□□ 0.35
ITM2C-209ENST00000543957 RTL1A6NKG5 1358 aa17.22■□□□□ 0.35
ITM2C-209ENST00000543957 N4BP2Q86UW6 1770 aaPredicted RBP17.22■□□□□ 0.35
ITM2C-209ENST00000543957 KIF13BQ9NQT8 1826 aa17.21■□□□□ 0.35
ITM2C-209ENST00000543957 HSPA1AP0DMV8 641 aaKnown RBP17.21■□□□□ 0.35
ITM2C-209ENST00000543957 HSPA1BP0DMV9 641 aaKnown RBP17.21■□□□□ 0.35
ITM2C-209ENST00000543957 RRS1Q15050 365 aaKnown RBP17.21■□□□□ 0.35
ITM2C-209ENST00000543957 SMC1BQ8NDV3 1235 aa17.21■□□□□ 0.35
ITM2C-209ENST00000543957 KIAA1551Q9HCM1 1747 aa17.21■□□□□ 0.35
ITM2C-209ENST00000543957 KCPQ6ZWJ8 1503 aa17.21■□□□□ 0.34
ITM2C-209ENST00000543957 SMG6Q86US8 1419 aaKnown RBP17.21■□□□□ 0.34
ITM2C-209ENST00000543957 ITPK1Q13572 414 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms