RNA–Protein interactions for RNA: ENST00000543697.5

RAP1B-230, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAP1B, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-230ENST00000543697 MSS51Q4VC12 460 aa11.54□□□□□ -0.56
RAP1B-230ENST00000543697 SCUBE3Q8IX30 993 aa11.54□□□□□ -0.56
RAP1B-230ENST00000543697 POLR1AO95602 1720 aaPredicted RBP11.54□□□□□ -0.56
RAP1B-230ENST00000543697 CNTLNQ9NXG0 1405 aa11.53□□□□□ -0.56
RAP1B-230ENST00000543697 MROH2AA6NES4 1674 aa11.53□□□□□ -0.56
RAP1B-230ENST00000543697 APLP1P51693 650 aa11.53□□□□□ -0.56
RAP1B-230ENST00000543697 PTPRNQ16849 979 aa11.53□□□□□ -0.56
RAP1B-230ENST00000543697 PUS10Q3MIT2 529 aaKnown RBP11.53□□□□□ -0.56
RAP1B-230ENST00000543697 HMX1Q9NP08 348 aaPredicted RBP11.53□□□□□ -0.56
RAP1B-230ENST00000543697 DIP2CQ9Y2E4 1556 aa11.53□□□□□ -0.56
RAP1B-230ENST00000543697 ARHGAP5Q13017 1502 aa11.52□□□□□ -0.57
RAP1B-230ENST00000543697 BCAMP50895 628 aa11.52□□□□□ -0.57
RAP1B-230ENST00000543697 PDE4CQ08493 712 aa11.52□□□□□ -0.57
RAP1B-230ENST00000543697 LRRN4Q8WUT4 740 aa11.52□□□□□ -0.57
RAP1B-230ENST00000543697 GLMNQ92990 594 aa11.52□□□□□ -0.57
RAP1B-230ENST00000543697 IRF5Q13568 498 aa11.51□□□□□ -0.57
RAP1B-230ENST00000543697 SYMPKQ92797 1274 aaKnown RBP11.51□□□□□ -0.57
RAP1B-230ENST00000543697 THAP11Q96EK4 314 aa11.51□□□□□ -0.57
RAP1B-230ENST00000543697 CCNB3Q8WWL7 1395 aa11.51□□□□□ -0.57
RAP1B-230ENST00000543697 LRRC9Q6ZRR7 1453 aa11.51□□□□□ -0.57
RAP1B-230ENST00000543697 CDK12Q9NYV4 1490 aaPredicted RBP11.51□□□□□ -0.57
RAP1B-230ENST00000543697 EP400Q96L91 3159 aa11.5□□□□□ -0.57
RAP1B-230ENST00000543697 JUNDP17535 347 aa11.5□□□□□ -0.57
RAP1B-230ENST00000543697 THSD4Q6ZMP0 1018 aa11.5□□□□□ -0.57
RAP1B-230ENST00000543697 ARMC2Q8NEN0 867 aa11.5□□□□□ -0.57
RAP1B-230ENST00000543697 PLCH2O75038 1416 aa11.5□□□□□ -0.57
RAP1B-230ENST00000543697 MAP3K1Q13233 1512 aa11.5□□□□□ -0.57
RAP1B-230ENST00000543697 CDC42BPAQ5VT25 1732 aa11.49□□□□□ -0.57
RAP1B-230ENST00000543697 KANK4Q5T7N3 995 aaPredicted RBP11.49□□□□□ -0.57
RAP1B-230ENST00000543697 EFCAB2Q5VUJ9 269 aa11.49□□□□□ -0.57
RAP1B-230ENST00000543697 GPKOWQ92917 476 aaPredicted RBP eCLIP11.49□□□□□ -0.571e-6■■■■■ 28.4
RAP1B-230ENST00000543697 ESF1Q9H501 851 aaKnown RBP11.49□□□□□ -0.57
RAP1B-230ENST00000543697 ZMYM3Q14202 1370 aa11.49□□□□□ -0.57
RAP1B-230ENST00000543697 FAM135BQ49AJ0 1406 aa11.49□□□□□ -0.57
RAP1B-230ENST00000543697 DNMT1P26358 1616 aaKnown RBP11.49□□□□□ -0.57
RAP1B-230ENST00000543697 PREX2Q70Z35 1606 aa11.49□□□□□ -0.57
RAP1B-230ENST00000543697 CDC42BPBQ9Y5S2 1711 aa11.49□□□□□ -0.57
RAP1B-230ENST00000543697 BLOC1S3Q6QNY0 202 aa11.48□□□□□ -0.57
RAP1B-230ENST00000543697 RNF19BQ6ZMZ0 732 aa11.48□□□□□ -0.57
RAP1B-230ENST00000543697 ITSN2Q9NZM3 1697 aa11.48□□□□□ -0.57
RAP1B-230ENST00000543697 SYNMO15061 1565 aa11.47□□□□□ -0.57
RAP1B-230ENST00000543697 KDM5CP41229 1560 aa11.47□□□□□ -0.57
RAP1B-230ENST00000543697 NCOA2Q15596 1464 aa11.47□□□□□ -0.57
RAP1B-230ENST00000543697 EIF4G2P78344 907 aaKnown RBP eCLIP11.47□□□□□ -0.57
RAP1B-230ENST00000543697 GPSM3Q9Y4H4 160 aa11.47□□□□□ -0.57
RAP1B-230ENST00000543697 LRP5O75197 1615 aa11.46□□□□□ -0.57
RAP1B-230ENST00000543697 ABCA6Q8N139 1617 aa11.46□□□□□ -0.57
RAP1B-230ENST00000543697 GPR37L1O60883 481 aa11.46□□□□□ -0.57
RAP1B-230ENST00000543697 NR6A1Q15406 480 aa11.46□□□□□ -0.57
RAP1B-230ENST00000543697 WBP1LQ9NX94 342 aa11.46□□□□□ -0.57
RAP1B-230ENST00000543697 CFDP1Q9UEE9 299 aaPredicted RBP11.46□□□□□ -0.57
RAP1B-230ENST00000543697 XIRP1Q702N8 1843 aaKnown RBP11.46□□□□□ -0.58
RAP1B-230ENST00000543697 GPATCH8Q9UKJ3 1502 aaKnown RBP11.45□□□□□ -0.58
RAP1B-230ENST00000543697 PDIA4P13667 645 aaKnown RBP11.45□□□□□ -0.58
RAP1B-230ENST00000543697 RXRBP28702 533 aa11.45□□□□□ -0.58
RAP1B-230ENST00000543697 MCCD1P59942 119 aaPredicted RBP11.45□□□□□ -0.58
RAP1B-230ENST00000543697 FKBPLQ9UIM3 349 aa11.45□□□□□ -0.58
RAP1B-230ENST00000543697 MYT1LQ9UL68 1186 aa11.45□□□□□ -0.58
RAP1B-230ENST00000543697 LRP6O75581 1613 aa11.45□□□□□ -0.58
RAP1B-230ENST00000543697 PER1O15534 1290 aaPredicted RBP11.44□□□□□ -0.58
RAP1B-230ENST00000543697 DXOO77932 396 aaKnown RBP11.44□□□□□ -0.58
RAP1B-230ENST00000543697 F12P00748 615 aaPredicted RBP11.44□□□□□ -0.58
RAP1B-230ENST00000543697 MMP16P51512 607 aa11.44□□□□□ -0.58
RAP1B-230ENST00000543697 ZNF772Q68DY9 489 aaPredicted RBP11.44□□□□□ -0.58
RAP1B-230ENST00000543697 PPARGC1BQ86YN6 1023 aaKnown RBP11.44□□□□□ -0.58
RAP1B-230ENST00000543697 SPSB2Q99619 263 aa11.44□□□□□ -0.58
RAP1B-230ENST00000543697 A2ML1A8K2U0 1454 aa11.44□□□□□ -0.58
RAP1B-230ENST00000543697 CEP350Q5VT06 3117 aa11.43□□□□□ -0.58
RAP1B-230ENST00000543697 CCNYL3P0C7X3 344 aa11.43□□□□□ -0.58
RAP1B-230ENST00000543697 NR1H3Q13133 447 aa11.43□□□□□ -0.58
RAP1B-230ENST00000543697 HDGFL1Q5TGJ6 251 aa11.43□□□□□ -0.58
RAP1B-230ENST00000543697 KRTAP3-3Q9BYR6 98 aa11.43□□□□□ -0.58
RAP1B-230ENST00000543697 KRTAP3-2Q9BYR7 98 aa11.43□□□□□ -0.58
RAP1B-230ENST00000543697 ACIN1Q9UKV3 1341 aaKnown RBP11.42□□□□□ -0.58
RAP1B-230ENST00000543697 POM121CA8CG34 1229 aa11.42□□□□□ -0.58
RAP1B-230ENST00000543697 SEMA3FQ13275 785 aa11.42□□□□□ -0.58
RAP1B-230ENST00000543697 NBPF14Q5TI25 921 aa11.42□□□□□ -0.58
RAP1B-230ENST00000543697 ALG2Q9H553 416 aa11.42□□□□□ -0.58
RAP1B-230ENST00000543697 ZNF518AQ6AHZ1 1483 aa11.42□□□□□ -0.58
RAP1B-230ENST00000543697 ROBO1Q9Y6N7 1651 aa11.41□□□□□ -0.58
RAP1B-230ENST00000543697 MED14O60244 1454 aa11.41□□□□□ -0.58
RAP1B-230ENST00000543697 AFAP1Q8N556 730 aa11.41□□□□□ -0.58
RAP1B-230ENST00000543697 RGS12O14924 1447 aa11.41□□□□□ -0.58
RAP1B-230ENST00000543697 SAMD9LQ8IVG5 1584 aa11.41□□□□□ -0.58
RAP1B-230ENST00000543697 ZBBXA8MT70 800 aa11.4□□□□□ -0.58
RAP1B-230ENST00000543697 ZPR1O75312 459 aa11.4□□□□□ -0.58
RAP1B-230ENST00000543697 ADH1BP00325 375 aa11.4□□□□□ -0.58
RAP1B-230ENST00000543697 VAC14Q08AM6 782 aa11.4□□□□□ -0.58
RAP1B-230ENST00000543697 EVA1BQ9NVM1 165 aa11.4□□□□□ -0.58
RAP1B-230ENST00000543697 ABCC1P33527 1531 aa11.4□□□□□ -0.59
RAP1B-230ENST00000543697 MYOM3Q5VTT5 1437 aa11.39□□□□□ -0.59
RAP1B-230ENST00000543697 EPS8L1Q8TE68 723 aa11.39□□□□□ -0.59
RAP1B-230ENST00000543697 NUDT12Q9BQG2 462 aa11.39□□□□□ -0.59
RAP1B-230ENST00000543697 SYCP2Q9BX26 1530 aa11.39□□□□□ -0.59
RAP1B-230ENST00000543697 PLEKHH2Q8IVE3 1493 aa11.38□□□□□ -0.59
RAP1B-230ENST00000543697 NPHP4O75161 1426 aaPredicted RBP11.38□□□□□ -0.59
RAP1B-230ENST00000543697 YY1P25490 414 aa11.38□□□□□ -0.59
RAP1B-230ENST00000543697 HNRNPMP52272 730 aaKnown RBP eCLIP11.38□□□□□ -0.59
RAP1B-230ENST00000543697 PBXIP1Q96AQ6 731 aa11.38□□□□□ -0.59
RAP1B-230ENST00000543697 KCTD12Q96CX2 325 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms