RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 ZCRB1Q8TBF4 217 aaKnown RBP22.94■■□□□ 1.26
RABGGTA-203ENST00000543002 PLEKHG2Q9H7P9 1386 aa22.93■■□□□ 1.26
RABGGTA-203ENST00000543002 FAM182BQ5T319 152 aa22.92■■□□□ 1.26
RABGGTA-203ENST00000543002 MARCH10Q8NA82 808 aaPredicted RBP22.92■■□□□ 1.26
RABGGTA-203ENST00000543002 HMOX1P09601 288 aa22.91■■□□□ 1.26
RABGGTA-203ENST00000543002 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.91■■□□□ 1.261e-7■□□□□ 10.6
RABGGTA-203ENST00000543002 FAM196AQ6ZSG2 479 aa22.89■■□□□ 1.26
RABGGTA-203ENST00000543002 SPG7Q9UQ90 795 aa22.89■■□□□ 1.26
RABGGTA-203ENST00000543002 U2AF1L5P0DN76 240 aaPredicted RBP22.88■■□□□ 1.25
RABGGTA-203ENST00000543002 U2AF1Q01081 240 aaKnown RBP eCLIP22.88■■□□□ 1.25
RABGGTA-203ENST00000543002 DDX54Q8TDD1 881 aaKnown RBP22.88■■□□□ 1.25
RABGGTA-203ENST00000543002 PKD1L3Q7Z443 1732 aa22.88■■□□□ 1.25
RABGGTA-203ENST00000543002 PCDH11XQ9BZA7 1347 aa22.87■■□□□ 1.25
RABGGTA-203ENST00000543002 PCDH11YQ9BZA8 1340 aa22.87■■□□□ 1.25
RABGGTA-203ENST00000543002 BCL9O00512 1426 aa22.87■■□□□ 1.25
RABGGTA-203ENST00000543002 SHANK3Q9BYB0 1731 aa22.87■■□□□ 1.25
RABGGTA-203ENST00000543002 PLEKHO1Q53GL0 409 aaPredicted RBP22.86■■□□□ 1.25
RABGGTA-203ENST00000543002 SOCS7O14512 581 aa22.85■■□□□ 1.25
RABGGTA-203ENST00000543002 AMOTQ4VCS5 1084 aa22.85■■□□□ 1.25
RABGGTA-203ENST00000543002 CYP27B1O15528 508 aa22.84■■□□□ 1.25
RABGGTA-203ENST00000543002 RSPH6AQ9H0K4 717 aa22.84■■□□□ 1.25
RABGGTA-203ENST00000543002 FCHSD2O94868 740 aa22.83■■□□□ 1.25
RABGGTA-203ENST00000543002 UPF1Q92900 1129 aaKnown RBP eCLIP22.83■■□□□ 1.25
RABGGTA-203ENST00000543002 EP400Q96L91 3159 aa22.82■■□□□ 1.24
RABGGTA-203ENST00000543002 PRKAR2BP31323 418 aa22.81■■□□□ 1.24
RABGGTA-203ENST00000543002 CCDC125Q86Z20 511 aa22.81■■□□□ 1.24
RABGGTA-203ENST00000543002 IFNL2Q8IZJ0 200 aa22.81■■□□□ 1.24
RABGGTA-203ENST00000543002 PHKG2P15735 406 aa22.8■■□□□ 1.24
RABGGTA-203ENST00000543002 CCDC184Q52MB2 194 aa22.8■■□□□ 1.24
RABGGTA-203ENST00000543002 DIEXFQ68CQ4 756 aaKnown RBP22.8■■□□□ 1.24
RABGGTA-203ENST00000543002 ZNF530Q6P9A1 599 aaPredicted RBP22.8■■□□□ 1.24
RABGGTA-203ENST00000543002 TRIM37O94972 964 aa22.79■■□□□ 1.24
RABGGTA-203ENST00000543002 NKX1-1Q15270 411 aaPredicted RBP22.79■■□□□ 1.24
RABGGTA-203ENST00000543002 WDR43Q15061 677 aaKnown RBP eCLIP22.78■■□□□ 1.24
RABGGTA-203ENST00000543002 SBF2Q86WG5 1849 aa22.77■■□□□ 1.24
RABGGTA-203ENST00000543002 MTHFSDQ2M296 383 aaKnown RBP22.77■■□□□ 1.24
RABGGTA-203ENST00000543002 C1orf141Q5JVX7 400 aa22.76■■□□□ 1.23
RABGGTA-203ENST00000543002 ACSBG1Q96GR2 724 aa22.76■■□□□ 1.23
RABGGTA-203ENST00000543002 PHACTR3Q96KR7 559 aa22.76■■□□□ 1.23
RABGGTA-203ENST00000543002 PNNQ9H307 717 aaKnown RBP22.76■■□□□ 1.23
RABGGTA-203ENST00000543002 MRS2Q9HD23 443 aa22.76■■□□□ 1.23
RABGGTA-203ENST00000543002 HSP90AB1P08238 724 aaKnown RBP22.75■■□□□ 1.23
RABGGTA-203ENST00000543002 GAS2L2Q8NHY3 880 aa22.75■■□□□ 1.23
RABGGTA-203ENST00000543002 BCL11BQ9C0K0 894 aaPredicted RBP22.75■■□□□ 1.23
RABGGTA-203ENST00000543002 SF3B2Q13435 895 aaKnown RBP22.74■■□□□ 1.23
RABGGTA-203ENST00000543002 AKAP4Q5JQC9 854 aa22.74■■□□□ 1.23
RABGGTA-203ENST00000543002 PLEKHF1Q96S99 279 aa22.74■■□□□ 1.23
RABGGTA-203ENST00000543002 KCNQ2O43526 872 aa22.73■■□□□ 1.23
RABGGTA-203ENST00000543002 ADAMTS8Q9UP79 889 aa22.73■■□□□ 1.23
RABGGTA-203ENST00000543002 NHSQ6T4R5 1651 aa22.72■■□□□ 1.23
RABGGTA-203ENST00000543002 NEFMP07197 916 aa22.72■■□□□ 1.23
RABGGTA-203ENST00000543002 PRIM1P49642 420 aaKnown RBP22.72■■□□□ 1.23
RABGGTA-203ENST00000543002 PTF1AQ7RTS3 328 aa22.72■■□□□ 1.23
RABGGTA-203ENST00000543002 DCAF5Q96JK2 942 aa22.72■■□□□ 1.23
RABGGTA-203ENST00000543002 DOT1LQ8TEK3 1739 aa22.71■■□□□ 1.23
RABGGTA-203ENST00000543002 TNS1Q9HBL0 1735 aaKnown RBP22.71■■□□□ 1.23
RABGGTA-203ENST00000543002 PNISRQ8TF01 805 aaKnown RBP22.7■■□□□ 1.22
RABGGTA-203ENST00000543002 KAT6BQ8WYB5 2073 aa22.7■■□□□ 1.22
RABGGTA-203ENST00000543002 APBA3O96018 575 aa22.69■■□□□ 1.22
RABGGTA-203ENST00000543002 SYTL4Q96C24 671 aaPredicted RBP22.69■■□□□ 1.22
RABGGTA-203ENST00000543002 KDM6AO15550 1401 aaPredicted RBP22.69■■□□□ 1.22
RABGGTA-203ENST00000543002 MAPK8IP3Q9UPT6 1336 aa22.69■■□□□ 1.22
RABGGTA-203ENST00000543002 TOGARAM1Q9Y4F4 1720 aa22.68■■□□□ 1.22
RABGGTA-203ENST00000543002 BAG6P46379 1132 aa22.68■■□□□ 1.22
RABGGTA-203ENST00000543002 MPRIPQ6WCQ1 1025 aa22.68■■□□□ 1.22
RABGGTA-203ENST00000543002 MAP3K5Q99683 1374 aa22.67■■□□□ 1.22
RABGGTA-203ENST00000543002 GNAT3A8MTJ3 354 aa22.67■■□□□ 1.22
RABGGTA-203ENST00000543002 ERVV-2B6SEH9 535 aa22.67■■□□□ 1.22
RABGGTA-203ENST00000543002 DEFB132Q7Z7B7 95 aa22.66■■□□□ 1.22
RABGGTA-203ENST00000543002 RUNDC1Q96C34 613 aa22.66■■□□□ 1.22
RABGGTA-203ENST00000543002 CCER2I3L3R5 266 aa22.65■■□□□ 1.22
RABGGTA-203ENST00000543002 CCDC146Q8IYE0 955 aa22.65■■□□□ 1.22
RABGGTA-203ENST00000543002 PLSCR1O15162 318 aa22.64■■□□□ 1.22
RABGGTA-203ENST00000543002 RNMTO43148 476 aaKnown RBP22.64■■□□□ 1.22
RABGGTA-203ENST00000543002 NFE2L2Q16236 605 aa22.64■■□□□ 1.22
RABGGTA-203ENST00000543002 LGR6Q9HBX8 967 aa22.64■■□□□ 1.22
RABGGTA-203ENST00000543002 BTAF1O14981 1849 aa22.64■■□□□ 1.21
RABGGTA-203ENST00000543002 ITGB4P16144 1822 aa22.64■■□□□ 1.21
RABGGTA-203ENST00000543002 EN1Q05925 392 aaPredicted RBP22.63■■□□□ 1.21
RABGGTA-203ENST00000543002 TMOD3Q9NYL9 352 aa22.63■■□□□ 1.21
RABGGTA-203ENST00000543002 SCN11AQ9UI33 1791 aa22.63■■□□□ 1.21
RABGGTA-203ENST00000543002 ADAMTS7Q9UKP4 1686 aa22.63■■□□□ 1.21
RABGGTA-203ENST00000543002 CABP4P57796 275 aa22.62■■□□□ 1.21
RABGGTA-203ENST00000543002 MIER1Q8N108 512 aa22.62■■□□□ 1.21
RABGGTA-203ENST00000543002 PIGBQ92521 554 aa22.62■■□□□ 1.21
RABGGTA-203ENST00000543002 HTATSF1O43719 755 aaKnown RBP22.61■■□□□ 1.21
RABGGTA-203ENST00000543002 IL17REQ8NFR9 667 aa22.61■■□□□ 1.21
RABGGTA-203ENST00000543002 CAMKK2Q96RR4 588 aa22.61■■□□□ 1.21
RABGGTA-203ENST00000543002 TMPOP42166 694 aaKnown RBP22.59■■□□□ 1.21
RABGGTA-203ENST00000543002 EZH2Q15910 746 aaKnown RBP22.59■■□□□ 1.21
RABGGTA-203ENST00000543002 RTF1Q92541 710 aaKnown RBP22.59■■□□□ 1.21
RABGGTA-203ENST00000543002 SLC52A2Q9HAB3 445 aa22.59■■□□□ 1.21
RABGGTA-203ENST00000543002 NFATC2IPQ8NCF5 419 aa22.58■■□□□ 1.21
RABGGTA-203ENST00000543002 CEMIPQ8WUJ3 1361 aa22.58■■□□□ 1.21
RABGGTA-203ENST00000543002 MRC1P22897 1456 aa22.58■■□□□ 1.21
RABGGTA-203ENST00000543002 RGPD3A6NKT7 1758 aaPredicted RBP22.58■■□□□ 1.21
RABGGTA-203ENST00000543002 RGPD4Q7Z3J3 1758 aa22.58■■□□□ 1.21
RABGGTA-203ENST00000543002 VIRMAQ69YN4 1812 aaKnown RBP22.57■■□□□ 1.2
RABGGTA-203ENST00000543002 DLG5Q8TDM6 1919 aa22.57■■□□□ 1.2
RABGGTA-203ENST00000543002 RIPK4P57078 832 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms