RNA–Protein interactions for RNA: ENST00000542996.6

CALU-206, Transcript of calumenin, humanhuman

TSL 1 (best) BASIC

Gene CALU, Length 4,225 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALU-206ENST00000542996 CHL1O00533 1208 aa13.47□□□□□ -0.25
CALU-206ENST00000542996 RTL1A6NKG5 1358 aa13.47□□□□□ -0.25
CALU-206ENST00000542996 TMEM2Q9UHN6 1383 aa13.47□□□□□ -0.25
CALU-206ENST00000542996 N4BP2Q86UW6 1770 aaPredicted RBP13.46□□□□□ -0.25
CALU-206ENST00000542996 NGEFQ8N5V2 710 aa13.46□□□□□ -0.25
CALU-206ENST00000542996 LTN1O94822 1766 aa13.46□□□□□ -0.25
CALU-206ENST00000542996 CFAP44Q96MT7 982 aa13.46□□□□□ -0.25
CALU-206ENST00000542996 ARXQ96QS3 562 aa13.46□□□□□ -0.25
CALU-206ENST00000542996 USP31Q70CQ4 1352 aa13.46□□□□□ -0.26
CALU-206ENST00000542996 TTC21BQ7Z4L5 1316 aa13.46□□□□□ -0.26
CALU-206ENST00000542996 TWISTNBQ3B726 338 aaPredicted RBP13.46□□□□□ -0.26
CALU-206ENST00000542996 ZNF428Q96B54 188 aa13.45□□□□□ -0.26
CALU-206ENST00000542996 PNMA6EA0A0J9YXQ4 647 aa13.45□□□□□ -0.26
CALU-206ENST00000542996 NUTM2GQ5VZR2 741 aa13.44□□□□□ -0.26
CALU-206ENST00000542996 MCM4P33991 863 aa13.44□□□□□ -0.26
CALU-206ENST00000542996 KCNQ3O43525 872 aa13.44□□□□□ -0.26
CALU-206ENST00000542996 ALDH1L2Q3SY69 923 aa13.44□□□□□ -0.26
CALU-206ENST00000542996 ANKRD45Q5TZF3 282 aa13.44□□□□□ -0.26
CALU-206ENST00000542996 FTSJ3Q8IY81 847 aaKnown RBP13.44□□□□□ -0.26
CALU-206ENST00000542996 TNPO1Q92973 898 aaKnown RBP13.44□□□□□ -0.26
CALU-206ENST00000542996 TERF2IPQ9NYB0 399 aa13.44□□□□□ -0.26
CALU-206ENST00000542996 CEP85Q6P2H3 762 aa13.44□□□□□ -0.26
CALU-206ENST00000542996 ZGPATQ8N5A5 531 aaKnown RBP13.44□□□□□ -0.26
CALU-206ENST00000542996 PALD1Q9ULE6 856 aa13.44□□□□□ -0.26
CALU-206ENST00000542996 PRAMEF22A3QJZ6 481 aa13.43□□□□□ -0.26
CALU-206ENST00000542996 DDRGK1Q96HY6 314 aa13.43□□□□□ -0.26
CALU-206ENST00000542996 RWDD1Q9H446 243 aaPredicted RBP13.43□□□□□ -0.26
CALU-206ENST00000542996 CCDC61Q9Y6R9 512 aa13.43□□□□□ -0.26
CALU-206ENST00000542996 EYA1Q99502 592 aa13.43□□□□□ -0.26
CALU-206ENST00000542996 DDX19BQ9UMR2 479 aa13.43□□□□□ -0.26
CALU-206ENST00000542996 IL17REQ8NFR9 667 aa13.42□□□□□ -0.26
CALU-206ENST00000542996 DIP2AQ14689 1571 aa13.42□□□□□ -0.26
CALU-206ENST00000542996 CFAP53Q96M91 514 aa13.42□□□□□ -0.26
CALU-206ENST00000542996 IFT57Q9NWB7 429 aa13.42□□□□□ -0.26
CALU-206ENST00000542996 KDRP35968 1356 aa13.41□□□□□ -0.26
CALU-206ENST00000542996 SSFA2P28290 1259 aa13.41□□□□□ -0.26
CALU-206ENST00000542996 USHBP1Q8N6Y0 703 aa13.41□□□□□ -0.26
CALU-206ENST00000542996 DCTPP1Q9H773 170 aa13.4□□□□□ -0.26
CALU-206ENST00000542996 CYP2E1P05181 493 aaPredicted RBP13.4□□□□□ -0.26
CALU-206ENST00000542996 BMP2KLQ5H9B9 411 aa13.4□□□□□ -0.26
CALU-206ENST00000542996 CENPFP49454 3210 aa13.4□□□□□ -0.26
CALU-206ENST00000542996 RTL5Q5HYW3 569 aaPredicted RBP13.4□□□□□ -0.26
CALU-206ENST00000542996 INTS3Q68E01 1043 aaKnown RBP13.4□□□□□ -0.26
CALU-206ENST00000542996 CRYBG1Q9Y4K1 1723 aa13.4□□□□□ -0.26
CALU-206ENST00000542996 NECTIN2Q92692 538 aa13.39□□□□□ -0.27
CALU-206ENST00000542996 KIAA0232Q92628 1395 aa13.39□□□□□ -0.27
CALU-206ENST00000542996 PXDNQ92626 1479 aa13.39□□□□□ -0.27
CALU-206ENST00000542996 CHGBP05060 677 aa13.39□□□□□ -0.27
CALU-206ENST00000542996 SDSP20132 328 aa13.39□□□□□ -0.27
CALU-206ENST00000542996 ARHGAP23Q9P227 1491 aa13.38□□□□□ -0.27
CALU-206ENST00000542996 USP54Q70EL1 1684 aa13.38□□□□□ -0.27
CALU-206ENST00000542996 MED1Q15648 1581 aaPredicted RBP13.38□□□□□ -0.27
CALU-206ENST00000542996 APBB1O00213 710 aa13.38□□□□□ -0.27
CALU-206ENST00000542996 CT47B1P0C2W7 299 aaPredicted RBP13.38□□□□□ -0.27
CALU-206ENST00000542996 USP26Q9BXU7 913 aa13.38□□□□□ -0.27
CALU-206ENST00000542996 PLEKHG3A1L390 1219 aa13.37□□□□□ -0.27
CALU-206ENST00000542996 PHAXQ9H814 394 aaKnown RBP13.37□□□□□ -0.27
CALU-206ENST00000542996 KDM3BQ7LBC6 1761 aa13.37□□□□□ -0.27
CALU-206ENST00000542996 SIPA1L3O60292 1781 aaPredicted RBP13.37□□□□□ -0.27
CALU-206ENST00000542996 HDGFL2Q7Z4V5 671 aaPredicted RBP13.37□□□□□ -0.27
CALU-206ENST00000542996 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.37□□□□□ -0.27
CALU-206ENST00000542996 NFAT5O94916 1531 aa13.36□□□□□ -0.27
CALU-206ENST00000542996 SLC24A1O60721 1099 aa13.36□□□□□ -0.27
CALU-206ENST00000542996 LGR6Q9HBX8 967 aa13.36□□□□□ -0.27
CALU-206ENST00000542996 ANXA1P04083 346 aa13.36□□□□□ -0.27
CALU-206ENST00000542996 RAB3GAP1Q15042 981 aa13.36□□□□□ -0.27
CALU-206ENST00000542996 ARHGAP45Q92619 1136 aa13.36□□□□□ -0.27
CALU-206ENST00000542996 TAF6LQ9Y6J9 622 aa13.35□□□□□ -0.27
CALU-206ENST00000542996 KCNA6P17658 529 aa13.35□□□□□ -0.27
CALU-206ENST00000542996 SLIT1O75093 1534 aa13.35□□□□□ -0.27
CALU-206ENST00000542996 GLI3P10071 1580 aa13.35□□□□□ -0.27
CALU-206ENST00000542996 C5P01031 1676 aa13.34□□□□□ -0.27
CALU-206ENST00000542996 ANKRD44Q8N8A2 993 aa13.34□□□□□ -0.27
CALU-206ENST00000542996 CHD2O14647 1828 aaKnown RBP13.34□□□□□ -0.27
CALU-206ENST00000542996 TNRQ92752 1358 aa13.34□□□□□ -0.27
CALU-206ENST00000542996 EXOC6BQ9Y2D4 811 aa13.34□□□□□ -0.27
CALU-206ENST00000542996 IGSF1Q8N6C5 1336 aa13.33□□□□□ -0.27
CALU-206ENST00000542996 KIF16BQ96L93 1317 aa13.33□□□□□ -0.27
CALU-206ENST00000542996 TRAK2O60296 914 aa13.33□□□□□ -0.28
CALU-206ENST00000542996 TTC22Q5TAA0 569 aa13.33□□□□□ -0.28
CALU-206ENST00000542996 GPT2Q8TD30 523 aa13.33□□□□□ -0.28
CALU-206ENST00000542996 PLPPR3Q6T4P5 718 aa13.33□□□□□ -0.28
CALU-206ENST00000542996 SNX21Q969T3 373 aa13.33□□□□□ -0.28
CALU-206ENST00000542996 AMOTL2Q9Y2J4 779 aa13.33□□□□□ -0.28
CALU-206ENST00000542996 AXIN2Q9Y2T1 843 aa13.33□□□□□ -0.28
CALU-206ENST00000542996 SLC4A2P04920 1241 aa13.33□□□□□ -0.28
CALU-206ENST00000542996 STRCP1A6NGW2 1772 aa13.32□□□□□ -0.28
CALU-206ENST00000542996 PROSER3Q2NL68 480 aa13.32□□□□□ -0.28
CALU-206ENST00000542996 USP44Q9H0E7 712 aa13.32□□□□□ -0.28
CALU-206ENST00000542996 KAZALD1Q96I82 304 aa13.32□□□□□ -0.28
CALU-206ENST00000542996 LARP6Q9BRS8 491 aaKnown RBP13.32□□□□□ -0.28
CALU-206ENST00000542996 PLEKHG1Q9ULL1 1385 aa13.31□□□□□ -0.28
CALU-206ENST00000542996 ST3GAL1Q11201 340 aa13.31□□□□□ -0.28
CALU-206ENST00000542996 COG3Q96JB2 828 aa13.3□□□□□ -0.28
CALU-206ENST00000542996 NBPF7P0C2Y1 421 aaPredicted RBP13.3□□□□□ -0.28
CALU-206ENST00000542996 NBPF6Q5VWK0 638 aa13.3□□□□□ -0.28
CALU-206ENST00000542996 NBPF4Q96M43 638 aa13.3□□□□□ -0.28
CALU-206ENST00000542996 FER1L4A9Z1Z3 1794 aa13.3□□□□□ -0.28
CALU-206ENST00000542996 LRRC59Q96AG4 307 aaKnown RBP13.29□□□□□ -0.28
CALU-206ENST00000542996 BRCA2P51587 3418 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms