RNA–Protein interactions for RNA: ENST00000542145.5

RAP1B-228, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAP1B, Length 1,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-228ENST00000542145 NEUROD1Q13562 356 aa25.53■■□□□ 1.68
RAP1B-228ENST00000542145 EDC4Q6P2E9 1401 aaKnown RBP25.53■■□□□ 1.68
RAP1B-228ENST00000542145 YBX3P16989 372 aaKnown RBP eCLIP25.52■■□□□ 1.683e-11■■■□□ 17.4
RAP1B-228ENST00000542145 ANKRD36BQ8N2N9 1353 aa25.52■■□□□ 1.68
RAP1B-228ENST00000542145 IFFO2Q5TF58 517 aa25.51■■□□□ 1.67
RAP1B-228ENST00000542145 NSD2O96028 1365 aa25.51■■□□□ 1.67
RAP1B-228ENST00000542145 CEP350Q5VT06 3117 aa25.5■■□□□ 1.67
RAP1B-228ENST00000542145 A0A1W2PP64 1363 aa25.48■■□□□ 1.67
RAP1B-228ENST00000542145 GRIN3BO60391 1043 aa25.47■■□□□ 1.67
RAP1B-228ENST00000542145 COL23A1Q86Y22 540 aaPredicted RBP25.47■■□□□ 1.67
RAP1B-228ENST00000542145 TERF2IPQ9NYB0 399 aa25.46■■□□□ 1.67
RAP1B-228ENST00000542145 CCNL1Q9UK58 526 aaPredicted RBP25.46■■□□□ 1.67
RAP1B-228ENST00000542145 MSH5O43196 834 aa25.45■■□□□ 1.66
RAP1B-228ENST00000542145 ZCRB1Q8TBF4 217 aaKnown RBP25.45■■□□□ 1.66
RAP1B-228ENST00000542145 FBLN1P23142 703 aa25.44■■□□□ 1.66
RAP1B-228ENST00000542145 CARD11Q9BXL7 1154 aa25.44■■□□□ 1.66
RAP1B-228ENST00000542145 MAP3K19Q56UN5 1328 aa25.42■■□□□ 1.66
RAP1B-228ENST00000542145 HOXC9P31274 260 aa25.42■■□□□ 1.66
RAP1B-228ENST00000542145 MEGF6O75095 1541 aa25.42■■□□□ 1.66
RAP1B-228ENST00000542145 MSL1Q68DK7 614 aa25.41■■□□□ 1.66
RAP1B-228ENST00000542145 C5P01031 1676 aa25.39■■□□□ 1.66
RAP1B-228ENST00000542145 ATP10DQ9P241 1426 aa25.39■■□□□ 1.66
RAP1B-228ENST00000542145 AMPHP49418 695 aa25.39■■□□□ 1.66
RAP1B-228ENST00000542145 USP47Q96K76 1375 aa25.39■■□□□ 1.65
RAP1B-228ENST00000542145 TAF1LQ8IZX4 1826 aa25.39■■□□□ 1.65
RAP1B-228ENST00000542145 PUS7Q96PZ0 661 aaKnown RBP25.38■■□□□ 1.65
RAP1B-228ENST00000542145 COG3Q96JB2 828 aa25.37■■□□□ 1.65
RAP1B-228ENST00000542145 NBPF6Q5VWK0 638 aa25.35■■□□□ 1.65
RAP1B-228ENST00000542145 NBPF4Q96M43 638 aa25.35■■□□□ 1.65
RAP1B-228ENST00000542145 CD2APQ9Y5K6 639 aa25.35■■□□□ 1.65
RAP1B-228ENST00000542145 USHBP1Q8N6Y0 703 aa25.33■■□□□ 1.65
RAP1B-228ENST00000542145 GPBP1L1Q9HC44 474 aaPredicted RBP25.32■■□□□ 1.64
RAP1B-228ENST00000542145 RRS1Q15050 365 aaKnown RBP25.3■■□□□ 1.64
RAP1B-228ENST00000542145 CGNL1Q0VF96 1302 aa25.3■■□□□ 1.64
RAP1B-228ENST00000542145 ITGB4P16144 1822 aa25.3■■□□□ 1.64
RAP1B-228ENST00000542145 ADCY9O60503 1353 aa25.3■■□□□ 1.64
RAP1B-228ENST00000542145 FLAD1Q8NFF5 587 aa25.28■■□□□ 1.64
RAP1B-228ENST00000542145 ZNF526Q8TF50 670 aaPredicted RBP25.28■■□□□ 1.64
RAP1B-228ENST00000542145 RAPGEF4Q8WZA2 1011 aa25.28■■□□□ 1.64
RAP1B-228ENST00000542145 TESK2Q96S53 571 aa25.27■■□□□ 1.64
RAP1B-228ENST00000542145 UBR3Q6ZT12 1888 aa25.27■■□□□ 1.64
RAP1B-228ENST00000542145 RTL1A6NKG5 1358 aa25.27■■□□□ 1.64
RAP1B-228ENST00000542145 PALLDQ8WX93 1383 aa25.27■■□□□ 1.64
RAP1B-228ENST00000542145 C4BP0C0L5 1744 aa25.26■■□□□ 1.63
RAP1B-228ENST00000542145 HSPA6P17066 643 aa25.26■■□□□ 1.63
RAP1B-228ENST00000542145 MPRIPQ6WCQ1 1025 aa25.26■■□□□ 1.63
RAP1B-228ENST00000542145 AMIGO3Q86WK7 504 aa25.26■■□□□ 1.63
RAP1B-228ENST00000542145 TOGARAM1Q9Y4F4 1720 aa25.26■■□□□ 1.63
RAP1B-228ENST00000542145 TATP17735 454 aaPredicted RBP25.25■■□□□ 1.63
RAP1B-228ENST00000542145 SMIM5Q71RC9 77 aa25.24■■□□□ 1.63
RAP1B-228ENST00000542145 FYB1O15117 783 aa25.23■■□□□ 1.63
RAP1B-228ENST00000542145 GGNBP2Q9H3C7 697 aa25.23■■□□□ 1.63
RAP1B-228ENST00000542145 WWC3Q9ULE0 1092 aa25.23■■□□□ 1.63
RAP1B-228ENST00000542145 PCDH11XQ9BZA7 1347 aa25.22■■□□□ 1.63
RAP1B-228ENST00000542145 PCDH11YQ9BZA8 1340 aa25.22■■□□□ 1.63
RAP1B-228ENST00000542145 ST20-MTHFSA0A0A6YYL1 179 aa25.22■■□□□ 1.63
RAP1B-228ENST00000542145 HMGB2P26583 209 aaKnown RBP25.22■■□□□ 1.63
RAP1B-228ENST00000542145 IGSF1Q8N6C5 1336 aa25.21■■□□□ 1.63
RAP1B-228ENST00000542145 CYP27B1O15528 508 aa25.21■■□□□ 1.63
RAP1B-228ENST00000542145 HSP90AB2PQ58FF8 381 aa25.21■■□□□ 1.63
RAP1B-228ENST00000542145 SMG6Q86US8 1419 aaKnown RBP25.2■■□□□ 1.63
RAP1B-228ENST00000542145 AK7Q96M32 723 aa25.2■■□□□ 1.62
RAP1B-228ENST00000542145 PHF14O94880 888 aa25.19■■□□□ 1.62
RAP1B-228ENST00000542145 MAP2P11137 1827 aaKnown RBP25.19■■□□□ 1.62
RAP1B-228ENST00000542145 INSRP06213 1382 aa25.18■■□□□ 1.62
RAP1B-228ENST00000542145 SMARCC1Q92922 1105 aaPredicted RBP25.18■■□□□ 1.62
RAP1B-228ENST00000542145 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.17■■□□□ 1.62
RAP1B-228ENST00000542145 PIGBQ92521 554 aa25.16■■□□□ 1.62
RAP1B-228ENST00000542145 PKD1L3Q7Z443 1732 aa25.15■■□□□ 1.62
RAP1B-228ENST00000542145 KIF20BQ96Q89 1820 aa25.15■■□□□ 1.62
RAP1B-228ENST00000542145 KIF3CO14782 793 aa25.15■■□□□ 1.62
RAP1B-228ENST00000542145 TONSLQ96HA7 1378 aa25.14■■□□□ 1.61
RAP1B-228ENST00000542145 FLT4P35916 1363 aa25.13■■□□□ 1.61
RAP1B-228ENST00000542145 SLC24A1O60721 1099 aa25.12■■□□□ 1.61
RAP1B-228ENST00000542145 LINC00116Q8NCU8 138 aa25.12■■□□□ 1.61
RAP1B-228ENST00000542145 SSFA2P28290 1259 aa25.11■■□□□ 1.61
RAP1B-228ENST00000542145 NSD3Q9BZ95 1437 aa25.11■■□□□ 1.61
RAP1B-228ENST00000542145 LOC102724428A0A0B4J2F2 783 aa25.1■■□□□ 1.61
RAP1B-228ENST00000542145 SIK1P57059 783 aa25.1■■□□□ 1.61
RAP1B-228ENST00000542145 NKX1-1Q15270 411 aaPredicted RBP25.1■■□□□ 1.61
RAP1B-228ENST00000542145 KIF24Q5T7B8 1368 aa25.09■■□□□ 1.61
RAP1B-228ENST00000542145 N4BP2Q86UW6 1770 aaPredicted RBP25.09■■□□□ 1.61
RAP1B-228ENST00000542145 KIF13BQ9NQT8 1826 aa25.09■■□□□ 1.61
RAP1B-228ENST00000542145 CICQ96RK0 1608 aaPredicted RBP25.08■■□□□ 1.61
RAP1B-228ENST00000542145 KIAA1551Q9HCM1 1747 aa25.08■■□□□ 1.61
RAP1B-228ENST00000542145 ITPK1Q13572 414 aa25.07■■□□□ 1.6
RAP1B-228ENST00000542145 EMILIN1Q9Y6C2 1016 aa25.07■■□□□ 1.6
RAP1B-228ENST00000542145 ASAP1Q9ULH1 1129 aa25.06■■□□□ 1.6
RAP1B-228ENST00000542145 NCAPD2Q15021 1401 aa25.05■■□□□ 1.6
RAP1B-228ENST00000542145 GNPATO15228 680 aa25.05■■□□□ 1.6
RAP1B-228ENST00000542145 SPG7Q9UQ90 795 aa25.04■■□□□ 1.6
RAP1B-228ENST00000542145 MMP10P09238 476 aa25.03■■□□□ 1.6
RAP1B-228ENST00000542145 ATP6V1AP38606 617 aa25.03■■□□□ 1.6
RAP1B-228ENST00000542145 TMF1P82094 1093 aa25.03■■□□□ 1.6
RAP1B-228ENST00000542145 TMOD3Q9NYL9 352 aa25.03■■□□□ 1.6
RAP1B-228ENST00000542145 PXDNLA1KZ92 1463 aa25.02■■□□□ 1.6
RAP1B-228ENST00000542145 APLP1P51693 650 aa25.02■■□□□ 1.6
RAP1B-228ENST00000542145 DNAJC5GQ8N7S2 189 aa25.01■■□□□ 1.59
RAP1B-228ENST00000542145 CARD14Q9BXL6 1004 aa25■■□□□ 1.59
RAP1B-228ENST00000542145 ANKRD26Q9UPS8 1709 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms