RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 SPATA31A3Q5VYP0 1347 aa19.6■□□□□ 0.73
CLPTM1-202ENST00000541297 IL27Q8NEV9 243 aa19.59■□□□□ 0.73
CLPTM1-202ENST00000541297 GNAI1P63096 354 aa19.58■□□□□ 0.73
CLPTM1-202ENST00000541297 MBIPQ9NS73 344 aa19.58■□□□□ 0.73
CLPTM1-202ENST00000541297 IFT57Q9NWB7 429 aa19.58■□□□□ 0.73
CLPTM1-202ENST00000541297 ANKRD24Q8TF21 1146 aa19.57■□□□□ 0.72
CLPTM1-202ENST00000541297 SKAP1Q86WV1 359 aa19.57■□□□□ 0.72
CLPTM1-202ENST00000541297 CFAP44Q96MT7 982 aa19.56■□□□□ 0.72
CLPTM1-202ENST00000541297 ZNF853P0CG23 659 aa19.56■□□□□ 0.72
CLPTM1-202ENST00000541297 CRYBG1Q9Y4K1 1723 aa19.56■□□□□ 0.72
CLPTM1-202ENST00000541297 ELL2O00472 640 aaPredicted RBP19.55■□□□□ 0.72
CLPTM1-202ENST00000541297 USP35Q9P2H5 1018 aa19.55■□□□□ 0.72
CLPTM1-202ENST00000541297 GAS2L2Q8NHY3 880 aa19.55■□□□□ 0.72
CLPTM1-202ENST00000541297 CHRNA2Q15822 529 aa19.54■□□□□ 0.72
CLPTM1-202ENST00000541297 RTF1Q92541 710 aaKnown RBP19.54■□□□□ 0.72
CLPTM1-202ENST00000541297 SMC4Q9NTJ3 1288 aa19.54■□□□□ 0.72
CLPTM1-202ENST00000541297 TNNQ9UQP3 1299 aa19.54■□□□□ 0.72
CLPTM1-202ENST00000541297 CT47B1P0C2W7 299 aaPredicted RBP19.54■□□□□ 0.72
CLPTM1-202ENST00000541297 PANK1Q8TE04 598 aa19.54■□□□□ 0.72
CLPTM1-202ENST00000541297 SOS2Q07890 1332 aaPredicted RBP19.54■□□□□ 0.72
CLPTM1-202ENST00000541297 TSPYL6Q8N831 410 aa19.53■□□□□ 0.72
CLPTM1-202ENST00000541297 SSH1Q8WYL5 1049 aa19.53■□□□□ 0.72
CLPTM1-202ENST00000541297 CLUAP1Q96AJ1 413 aa19.52■□□□□ 0.71
CLPTM1-202ENST00000541297 MIS18AQ9NYP9 233 aa19.52■□□□□ 0.71
CLPTM1-202ENST00000541297 RTN4Q9NQC3 1192 aaKnown RBP19.51■□□□□ 0.71
CLPTM1-202ENST00000541297 KIAA0232Q92628 1395 aa19.51■□□□□ 0.71
CLPTM1-202ENST00000541297 ERBB3P21860 1342 aa19.51■□□□□ 0.71
CLPTM1-202ENST00000541297 COL18A1P39060 1754 aa19.5■□□□□ 0.71
CLPTM1-202ENST00000541297 GNAT3A8MTJ3 354 aa19.5■□□□□ 0.71
CLPTM1-202ENST00000541297 C8orf58Q8NAV2 365 aa19.5■□□□□ 0.71
CLPTM1-202ENST00000541297 COG6Q9Y2V7 657 aa19.5■□□□□ 0.71
CLPTM1-202ENST00000541297 NHSL1Q5SYE7 1610 aa19.5■□□□□ 0.71
CLPTM1-202ENST00000541297 CRB1P82279 1406 aa19.5■□□□□ 0.71
CLPTM1-202ENST00000541297 RLBP1P12271 317 aa19.49■□□□□ 0.71
CLPTM1-202ENST00000541297 PDE3AQ14432 1141 aa19.49■□□□□ 0.71
CLPTM1-202ENST00000541297 KRT24Q2M2I5 525 aa19.49■□□□□ 0.71
CLPTM1-202ENST00000541297 VAMP4O75379 141 aa19.48■□□□□ 0.71
CLPTM1-202ENST00000541297 HAP1P54257 671 aaPredicted RBP19.48■□□□□ 0.71
CLPTM1-202ENST00000541297 TWISTNBQ3B726 338 aaPredicted RBP19.48■□□□□ 0.71
CLPTM1-202ENST00000541297 MAP3K5Q99683 1374 aa19.48■□□□□ 0.71
CLPTM1-202ENST00000541297 CHL1O00533 1208 aa19.47■□□□□ 0.71
CLPTM1-202ENST00000541297 NLRP2Q9NX02 1062 aa19.47■□□□□ 0.71
CLPTM1-202ENST00000541297 LTBP4Q8N2S1 1624 aa19.47■□□□□ 0.71
CLPTM1-202ENST00000541297 CSB-PGBD3P0DP91 1061 aa19.46■□□□□ 0.71
CLPTM1-202ENST00000541297 NOB1Q9ULX3 412 aaKnown RBP19.46■□□□□ 0.71
CLPTM1-202ENST00000541297 CAMTA1Q9Y6Y1 1673 aa19.46■□□□□ 0.71
CLPTM1-202ENST00000541297 ROBO1Q9Y6N7 1651 aa19.46■□□□□ 0.71
CLPTM1-202ENST00000541297 ZKSCAN2Q63HK3 967 aa19.46■□□□□ 0.71
CLPTM1-202ENST00000541297 IL17REQ8NFR9 667 aa19.46■□□□□ 0.71
CLPTM1-202ENST00000541297 TSPYL4Q9UJ04 414 aa19.45■□□□□ 0.7
CLPTM1-202ENST00000541297 ABCA3Q99758 1704 aa19.45■□□□□ 0.7
CLPTM1-202ENST00000541297 DDRGK1Q96HY6 314 aa19.45■□□□□ 0.7
CLPTM1-202ENST00000541297 LRRC37A3O60309 1634 aa19.44■□□□□ 0.7
CLPTM1-202ENST00000541297 NCAPD2Q15021 1401 aa19.44■□□□□ 0.7
CLPTM1-202ENST00000541297 ALDH1L2Q3SY69 923 aa19.44■□□□□ 0.7
CLPTM1-202ENST00000541297 PRDM11Q9NQV5 511 aa19.44■□□□□ 0.7
CLPTM1-202ENST00000541297 HTATSF1O43719 755 aaKnown RBP19.44■□□□□ 0.7
CLPTM1-202ENST00000541297 TRIM27P14373 513 aa19.44■□□□□ 0.7
CLPTM1-202ENST00000541297 ZNF530Q6P9A1 599 aaPredicted RBP19.44■□□□□ 0.7
CLPTM1-202ENST00000541297 FTSJ3Q8IY81 847 aaKnown RBP19.44■□□□□ 0.7
CLPTM1-202ENST00000541297 CPDO75976 1380 aa19.43■□□□□ 0.7
CLPTM1-202ENST00000541297 VIRMAQ69YN4 1812 aaKnown RBP19.43■□□□□ 0.7
CLPTM1-202ENST00000541297 PLEKHO1Q53GL0 409 aaPredicted RBP19.43■□□□□ 0.7
CLPTM1-202ENST00000541297 LMO7Q8WWI1 1683 aa19.42■□□□□ 0.7
CLPTM1-202ENST00000541297 DZIP1LQ8IYY4 767 aaKnown RBP19.42■□□□□ 0.7
CLPTM1-202ENST00000541297 SLC4A3P48751 1232 aa19.41■□□□□ 0.7
CLPTM1-202ENST00000541297 ATF7IPQ6VMQ6 1270 aa19.41■□□□□ 0.7
CLPTM1-202ENST00000541297 LGR6Q9HBX8 967 aa19.41■□□□□ 0.7
CLPTM1-202ENST00000541297 KIF16BQ96L93 1317 aa19.41■□□□□ 0.7
CLPTM1-202ENST00000541297 ZNF428Q96B54 188 aa19.41■□□□□ 0.7
CLPTM1-202ENST00000541297 FAM208AQ9UK61 1670 aaKnown RBP19.41■□□□□ 0.7
CLPTM1-202ENST00000541297 MPRIPQ6WCQ1 1025 aa19.4■□□□□ 0.7
CLPTM1-202ENST00000541297 MRPL50Q8N5N7 158 aaKnown RBP19.4■□□□□ 0.7
CLPTM1-202ENST00000541297 AMOTQ4VCS5 1084 aa19.39■□□□□ 0.7
CLPTM1-202ENST00000541297 RAPGEF4Q8WZA2 1011 aa19.39■□□□□ 0.7
CLPTM1-202ENST00000541297 AKAP4Q5JQC9 854 aa19.38■□□□□ 0.69
CLPTM1-202ENST00000541297 C1orf141Q5JVX7 400 aa19.38■□□□□ 0.69
CLPTM1-202ENST00000541297 ABCC6O95255 1503 aa19.38■□□□□ 0.69
CLPTM1-202ENST00000541297 KDM2BQ8NHM5 1336 aa19.38■□□□□ 0.69
CLPTM1-202ENST00000541297 NFKBIBQ15653 356 aa19.38■□□□□ 0.69
CLPTM1-202ENST00000541297 IPO8O15397 1037 aaKnown RBP19.37■□□□□ 0.69
CLPTM1-202ENST00000541297 MVPQ14764 893 aaKnown RBP19.37■□□□□ 0.69
CLPTM1-202ENST00000541297 TAF7Q15545 349 aaPredicted RBP19.37■□□□□ 0.69
CLPTM1-202ENST00000541297 MEGF6O75095 1541 aa19.37■□□□□ 0.69
CLPTM1-202ENST00000541297 ITPRIPQ8IWB1 547 aa19.37■□□□□ 0.69
CLPTM1-202ENST00000541297 CEMIPQ8WUJ3 1361 aa19.36■□□□□ 0.69
CLPTM1-202ENST00000541297 GSE1Q14687 1217 aa19.36■□□□□ 0.69
CLPTM1-202ENST00000541297 TMEM57Q8N5G2 664 aa19.36■□□□□ 0.69
CLPTM1-202ENST00000541297 TATP17735 454 aaPredicted RBP19.35■□□□□ 0.69
CLPTM1-202ENST00000541297 BRPF1P55201 1214 aaPredicted RBP19.35■□□□□ 0.69
CLPTM1-202ENST00000541297 TOM1L2Q6ZVM7 507 aa19.34■□□□□ 0.69
CLPTM1-202ENST00000541297 STRN4Q9NRL3 753 aa19.34■□□□□ 0.69
CLPTM1-202ENST00000541297 PIP4K2BP78356 416 aa19.33■□□□□ 0.69
CLPTM1-202ENST00000541297 TEFQ10587 303 aa19.33■□□□□ 0.69
CLPTM1-202ENST00000541297 BRPF3Q9ULD4 1205 aa19.33■□□□□ 0.69
CLPTM1-202ENST00000541297 COL5A2P05997 1499 aaPredicted RBP19.33■□□□□ 0.69
CLPTM1-202ENST00000541297 CENPQQ7L2Z9 268 aaPredicted RBP19.33■□□□□ 0.68
CLPTM1-202ENST00000541297 WDR17Q8IZU2 1322 aa19.33■□□□□ 0.68
CLPTM1-202ENST00000541297 AHDC1Q5TGY3 1603 aaPredicted RBP19.32■□□□□ 0.68
CLPTM1-202ENST00000541297 RNMTO43148 476 aaKnown RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms