RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 HSCBQ8IWL3 235 aa15.65■□□□□ 0.1
RNF4-222ENST00000541204 ZNF428Q96B54 188 aa15.65■□□□□ 0.1
RNF4-222ENST00000541204 DLG5Q8TDM6 1919 aa15.64■□□□□ 0.09
RNF4-222ENST00000541204 FLT4P35916 1363 aa15.64■□□□□ 0.09
RNF4-222ENST00000541204 ZBTB7BO15156 539 aaPredicted RBP15.64■□□□□ 0.09
RNF4-222ENST00000541204 CHD1LQ86WJ1 897 aa15.64■□□□□ 0.09
RNF4-222ENST00000541204 RTF1Q92541 710 aaKnown RBP15.63■□□□□ 0.09
RNF4-222ENST00000541204 CEP170BQ9Y4F5 1589 aaPredicted RBP15.63■□□□□ 0.09
RNF4-222ENST00000541204 SBNO1A3KN83 1393 aa15.63■□□□□ 0.09
RNF4-222ENST00000541204 GOLGA6L3A6NEY3 463 aa15.63■□□□□ 0.09
RNF4-222ENST00000541204 XPCQ01831 940 aaPredicted RBP15.63■□□□□ 0.09
RNF4-222ENST00000541204 ESCO1Q5FWF5 840 aa15.63■□□□□ 0.09
RNF4-222ENST00000541204 USHBP1Q8N6Y0 703 aa15.63■□□□□ 0.09
RNF4-222ENST00000541204 XRCC6P12956 609 aaKnown RBP eCLIP15.62■□□□□ 0.09
RNF4-222ENST00000541204 CHL1O00533 1208 aa15.62■□□□□ 0.09
RNF4-222ENST00000541204 TRAK2O60296 914 aa15.62■□□□□ 0.09
RNF4-222ENST00000541204 RBM25P49756 843 aaKnown RBP15.62■□□□□ 0.09
RNF4-222ENST00000541204 BRPF1P55201 1214 aaPredicted RBP15.62■□□□□ 0.09
RNF4-222ENST00000541204 RIMS1Q86UR5 1692 aaKnown RBP15.62■□□□□ 0.09
RNF4-222ENST00000541204 PHF8Q9UPP1 1060 aa15.61■□□□□ 0.09
RNF4-222ENST00000541204 HOXC9P31274 260 aa15.61■□□□□ 0.09
RNF4-222ENST00000541204 ANKRD45Q5TZF3 282 aa15.61■□□□□ 0.09
RNF4-222ENST00000541204 ARHGAP45Q92619 1136 aa15.61■□□□□ 0.09
RNF4-222ENST00000541204 FSD2A1L4K1 749 aa15.6■□□□□ 0.09
RNF4-222ENST00000541204 RRAGDQ9NQL2 400 aaPredicted RBP15.6■□□□□ 0.09
RNF4-222ENST00000541204 TSPYL4Q9UJ04 414 aa15.6■□□□□ 0.09
RNF4-222ENST00000541204 LMOD2Q6P5Q4 547 aa15.59■□□□□ 0.09
RNF4-222ENST00000541204 PANK2Q9BZ23 570 aa15.59■□□□□ 0.09
RNF4-222ENST00000541204 ABCC4O15439 1325 aa15.59■□□□□ 0.09
RNF4-222ENST00000541204 EIF5BO60841 1220 aaKnown RBP15.59■□□□□ 0.09
RNF4-222ENST00000541204 PSME1Q06323 249 aa15.59■□□□□ 0.09
RNF4-222ENST00000541204 NECTIN2Q92692 538 aa15.59■□□□□ 0.09
RNF4-222ENST00000541204 API5Q9BZZ5 524 aaKnown RBP15.59■□□□□ 0.09
RNF4-222ENST00000541204 BMP2KLQ5H9B9 411 aa15.58■□□□□ 0.09
RNF4-222ENST00000541204 ARHGEF10O15013 1369 aa15.58■□□□□ 0.09
RNF4-222ENST00000541204 PIK3R4Q99570 1358 aa15.58■□□□□ 0.09
RNF4-222ENST00000541204 XRN1Q8IZH2 1706 aaKnown RBP15.58■□□□□ 0.09
RNF4-222ENST00000541204 SLC4A2P04920 1241 aa15.58■□□□□ 0.08
RNF4-222ENST00000541204 SIRT2Q8IXJ6 389 aa15.58■□□□□ 0.08
RNF4-222ENST00000541204 PIK3C2AO00443 1686 aa15.58■□□□□ 0.08
RNF4-222ENST00000541204 NCOA3Q9Y6Q9 1424 aa15.58■□□□□ 0.08
RNF4-222ENST00000541204 DDIT3P35638 169 aa15.58■□□□□ 0.08
RNF4-222ENST00000541204 NALCNQ8IZF0 1738 aa15.57■□□□□ 0.08
RNF4-222ENST00000541204 IGSF1Q8N6C5 1336 aa15.57■□□□□ 0.08
RNF4-222ENST00000541204 SNX21Q969T3 373 aa15.57■□□□□ 0.08
RNF4-222ENST00000541204 GCC1Q96CN9 775 aa15.57■□□□□ 0.08
RNF4-222ENST00000541204 ANKARQ7Z5J8 1434 aa15.56■□□□□ 0.08
RNF4-222ENST00000541204 DDX11L8A8MPP1 907 aa15.56■□□□□ 0.08
RNF4-222ENST00000541204 HSP90AB1P08238 724 aaKnown RBP15.56■□□□□ 0.08
RNF4-222ENST00000541204 SLC4A10Q6U841 1118 aa15.56■□□□□ 0.08
RNF4-222ENST00000541204 ORAI2Q96SN7 254 aa15.56■□□□□ 0.08
RNF4-222ENST00000541204 KIF2CQ99661 725 aa15.56■□□□□ 0.08
RNF4-222ENST00000541204 CRB1P82279 1406 aa15.56■□□□□ 0.08
RNF4-222ENST00000541204 GAS2L2Q8NHY3 880 aa15.55■□□□□ 0.08
RNF4-222ENST00000541204 G2E3Q7L622 706 aa15.55■□□□□ 0.08
RNF4-222ENST00000541204 F6X3S4 739 aa15.54■□□□□ 0.08
RNF4-222ENST00000541204 APBB1O00213 710 aa15.54■□□□□ 0.08
RNF4-222ENST00000541204 CD2BP2O95400 341 aaKnown RBP15.54■□□□□ 0.08
RNF4-222ENST00000541204 TNPO1Q92973 898 aaKnown RBP15.54■□□□□ 0.08
RNF4-222ENST00000541204 TBC1D9Q6ZT07 1266 aa15.54■□□□□ 0.08
RNF4-222ENST00000541204 CHMP4BQ9H444 224 aaKnown RBP15.54■□□□□ 0.08
RNF4-222ENST00000541204 FOXD4L1Q9NU39 408 aa15.54■□□□□ 0.08
RNF4-222ENST00000541204 KDRP35968 1356 aa15.53■□□□□ 0.08
RNF4-222ENST00000541204 RGPD1P0DJD0 1748 aa15.53■□□□□ 0.08
RNF4-222ENST00000541204 GNAT3A8MTJ3 354 aa15.53■□□□□ 0.08
RNF4-222ENST00000541204 PRKCSHP14314 528 aaPredicted RBP15.52■□□□□ 0.08
RNF4-222ENST00000541204 RBM42Q9BTD8 480 aaKnown RBP15.52■□□□□ 0.08
RNF4-222ENST00000541204 HSP90AA1P07900 732 aaKnown RBP15.51■□□□□ 0.07
RNF4-222ENST00000541204 MRE11P49959 708 aa15.51■□□□□ 0.07
RNF4-222ENST00000541204 HAP1P54257 671 aaPredicted RBP15.51■□□□□ 0.07
RNF4-222ENST00000541204 IL17REQ8NFR9 667 aa15.51■□□□□ 0.07
RNF4-222ENST00000541204 LRRC59Q96AG4 307 aaKnown RBP15.51■□□□□ 0.07
RNF4-222ENST00000541204 MEIS3Q99687 375 aa15.51■□□□□ 0.07
RNF4-222ENST00000541204 KIAA0232Q92628 1395 aa15.51■□□□□ 0.07
RNF4-222ENST00000541204 NBPF6Q5VWK0 638 aa15.51■□□□□ 0.07
RNF4-222ENST00000541204 NBPF4Q96M43 638 aa15.51■□□□□ 0.07
RNF4-222ENST00000541204 FMN2Q9NZ56 1722 aa15.51■□□□□ 0.07
RNF4-222ENST00000541204 MSH6P52701 1360 aa15.5■□□□□ 0.07
RNF4-222ENST00000541204 RAB3GAP1Q15042 981 aa15.5■□□□□ 0.07
RNF4-222ENST00000541204 INTS3Q68E01 1043 aaKnown RBP15.5■□□□□ 0.07
RNF4-222ENST00000541204 GRPEL1Q9HAV7 217 aa15.5■□□□□ 0.07
RNF4-222ENST00000541204 CIZ1Q9ULV3 898 aaPredicted RBP15.5■□□□□ 0.07
RNF4-222ENST00000541204 K7ELQ4 463 aaPredicted RBP15.49■□□□□ 0.07
RNF4-222ENST00000541204 PROSER2Q86WR7 435 aaPredicted RBP15.49■□□□□ 0.07
RNF4-222ENST00000541204 RGS12O14924 1447 aa15.49■□□□□ 0.07
RNF4-222ENST00000541204 C16orf71Q8IYS4 520 aaPredicted RBP15.48■□□□□ 0.07
RNF4-222ENST00000541204 GBP4Q96PP9 640 aa15.48■□□□□ 0.07
RNF4-222ENST00000541204 NPHP4O75161 1426 aaPredicted RBP15.48■□□□□ 0.07
RNF4-222ENST00000541204 SETD1BQ9UPS6 1966 aaKnown RBP15.48■□□□□ 0.07
RNF4-222ENST00000541204 STK31Q9BXU1 1019 aa15.48■□□□□ 0.07
RNF4-222ENST00000541204 GSPT1P15170 499 aaKnown RBP15.47■□□□□ 0.07
RNF4-222ENST00000541204 IP6K1Q92551 441 aa15.47■□□□□ 0.07
RNF4-222ENST00000541204 PTPRCP08575 1304 aa15.47■□□□□ 0.07
RNF4-222ENST00000541204 ADGRL3Q9HAR2 1447 aa15.47■□□□□ 0.07
RNF4-222ENST00000541204 SMARCA5O60264 1052 aaPredicted RBP15.47■□□□□ 0.07
RNF4-222ENST00000541204 CDC45O75419 566 aa15.47■□□□□ 0.07
RNF4-222ENST00000541204 FKBP5Q13451 457 aaPredicted RBP15.47■□□□□ 0.07
RNF4-222ENST00000541204 MAP3K5Q99683 1374 aa15.47■□□□□ 0.07
RNF4-222ENST00000541204 LGR6Q9HBX8 967 aa15.46■□□□□ 0.07
RNF4-222ENST00000541204 CHD2O14647 1828 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms