RNA–Protein interactions for RNA: ENST00000541157.5

MRE11-210, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 4

Gene MRE11, Length 594 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-210ENST00000541157 MED1Q15648 1581 aaPredicted RBP13.25□□□□□ -0.29
MRE11-210ENST00000541157 U2SURPO15042 1029 aaKnown RBP13.25□□□□□ -0.29
MRE11-210ENST00000541157 SOX12O15370 315 aa13.25□□□□□ -0.29
MRE11-210ENST00000541157 SEC24BO95487 1268 aa13.25□□□□□ -0.29
MRE11-210ENST00000541157 KCNH5Q8NCM2 988 aa13.25□□□□□ -0.29
MRE11-210ENST00000541157 DDX17Q92841 729 aaKnown RBP13.25□□□□□ -0.29
MRE11-210ENST00000541157 RUNDC1Q96C34 613 aa13.25□□□□□ -0.29
MRE11-210ENST00000541157 PHRF1Q9P1Y6 1649 aaKnown RBP13.24□□□□□ -0.29
MRE11-210ENST00000541157 ARHGEF10O15013 1369 aa13.24□□□□□ -0.29
MRE11-210ENST00000541157 NGEFQ8N5V2 710 aa13.24□□□□□ -0.29
MRE11-210ENST00000541157 SOS2Q07890 1332 aaPredicted RBP13.23□□□□□ -0.29
MRE11-210ENST00000541157 SPATA31A3Q5VYP0 1347 aa13.23□□□□□ -0.29
MRE11-210ENST00000541157 RGPD1P0DJD0 1748 aa13.23□□□□□ -0.29
MRE11-210ENST00000541157 SENP3-EIF4A1A0A087X0R7 540 aa13.23□□□□□ -0.29
MRE11-210ENST00000541157 IRX5P78411 483 aaPredicted RBP13.23□□□□□ -0.29
MRE11-210ENST00000541157 COLQQ9Y215 455 aaPredicted RBP13.23□□□□□ -0.29
MRE11-210ENST00000541157 LTN1O94822 1766 aa13.22□□□□□ -0.29
MRE11-210ENST00000541157 APAF1O14727 1248 aa13.22□□□□□ -0.29
MRE11-210ENST00000541157 FCHSD2O94868 740 aa13.22□□□□□ -0.29
MRE11-210ENST00000541157 PLCG2P16885 1265 aa13.22□□□□□ -0.29
MRE11-210ENST00000541157 AMPHP49418 695 aa13.22□□□□□ -0.29
MRE11-210ENST00000541157 PDE3BQ13370 1112 aa13.22□□□□□ -0.29
MRE11-210ENST00000541157 EIF4A2Q14240 407 aaKnown RBP13.22□□□□□ -0.29
MRE11-210ENST00000541157 HSP90AB2PQ58FF8 381 aa13.22□□□□□ -0.29
MRE11-210ENST00000541157 LMOD2Q6P5Q4 547 aa13.22□□□□□ -0.29
MRE11-210ENST00000541157 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.22□□□□□ -0.297e-7■■■■□ 23.6
MRE11-210ENST00000541157 CRYBG1Q9Y4K1 1723 aa13.22□□□□□ -0.29
MRE11-210ENST00000541157 ZNF521Q96K83 1311 aa13.21□□□□□ -0.29
MRE11-210ENST00000541157 POTEFA5A3E0 1075 aa13.21□□□□□ -0.29
MRE11-210ENST00000541157 GCP02774 474 aa13.21□□□□□ -0.29
MRE11-210ENST00000541157 HOXC9P31274 260 aa13.21□□□□□ -0.29
MRE11-210ENST00000541157 PLEKHF1Q96S99 279 aa13.21□□□□□ -0.29
MRE11-210ENST00000541157 PNNQ9H307 717 aaKnown RBP13.21□□□□□ -0.29
MRE11-210ENST00000541157 TCP11L2Q8N4U5 519 aa13.2□□□□□ -0.3
MRE11-210ENST00000541157 RSPH6AQ9H0K4 717 aa13.2□□□□□ -0.3
MRE11-210ENST00000541157 ROBO1Q9Y6N7 1651 aa13.2□□□□□ -0.3
MRE11-210ENST00000541157 AHDC1Q5TGY3 1603 aaPredicted RBP13.2□□□□□ -0.3
MRE11-210ENST00000541157 ARHGEF25Q86VW2 580 aa13.19□□□□□ -0.3
MRE11-210ENST00000541157 IP6K1Q92551 441 aa13.19□□□□□ -0.3
MRE11-210ENST00000541157 OCEL1Q9H607 264 aa13.19□□□□□ -0.3
MRE11-210ENST00000541157 SALL2Q9Y467 1007 aaPredicted RBP13.19□□□□□ -0.3
MRE11-210ENST00000541157 MAPK8IP3Q9UPT6 1336 aa13.18□□□□□ -0.3
MRE11-210ENST00000541157 ABCC6O95255 1503 aa13.18□□□□□ -0.3
MRE11-210ENST00000541157 HMOX1P09601 288 aa13.17□□□□□ -0.3
MRE11-210ENST00000541157 PRKAR2BP31323 418 aa13.17□□□□□ -0.3
MRE11-210ENST00000541157 IGSF1Q8N6C5 1336 aa13.16□□□□□ -0.3
MRE11-210ENST00000541157 CCDC27Q2M243 656 aa13.16□□□□□ -0.3
MRE11-210ENST00000541157 CPDO75976 1380 aa13.16□□□□□ -0.3
MRE11-210ENST00000541157 KDRP35968 1356 aa13.16□□□□□ -0.3
MRE11-210ENST00000541157 ABCA3Q99758 1704 aa13.16□□□□□ -0.3
MRE11-210ENST00000541157 NEFMP07197 916 aa13.15□□□□□ -0.3
MRE11-210ENST00000541157 PDCD7Q8N8D1 485 aaKnown RBP13.15□□□□□ -0.3
MRE11-210ENST00000541157 RRP7AQ9Y3A4 280 aaKnown RBP13.15□□□□□ -0.3
MRE11-210ENST00000541157 TMPOP42166 694 aaKnown RBP13.14□□□□□ -0.31
MRE11-210ENST00000541157 SULT6B1Q6IMI4 303 aa13.14□□□□□ -0.31
MRE11-210ENST00000541157 ILDR1Q86SU0 546 aaPredicted RBP13.14□□□□□ -0.31
MRE11-210ENST00000541157 AEBP1Q8IUX7 1158 aa13.14□□□□□ -0.31
MRE11-210ENST00000541157 WWC1Q8IX03 1113 aa13.14□□□□□ -0.31
MRE11-210ENST00000541157 CDCA7LQ96GN5 454 aa13.14□□□□□ -0.31
MRE11-210ENST00000541157 EYA1Q99502 592 aa13.14□□□□□ -0.31
MRE11-210ENST00000541157 MFRPQ9BY79 579 aa13.14□□□□□ -0.31
MRE11-210ENST00000541157 COL18A1P39060 1754 aa13.13□□□□□ -0.31
MRE11-210ENST00000541157 ZBTB7CA1YPR0 619 aa13.13□□□□□ -0.31
MRE11-210ENST00000541157 TOM1O60784 492 aa13.13□□□□□ -0.31
MRE11-210ENST00000541157 CABLES1Q8TDN4 633 aa13.13□□□□□ -0.31
MRE11-210ENST00000541157 PHACTR3Q96KR7 559 aa13.13□□□□□ -0.31
MRE11-210ENST00000541157 CAMTA1Q9Y6Y1 1673 aa13.12□□□□□ -0.31
MRE11-210ENST00000541157 ZC3H6P61129 1189 aaKnown RBP13.12□□□□□ -0.31
MRE11-210ENST00000541157 NKX1-1Q15270 411 aaPredicted RBP13.12□□□□□ -0.31
MRE11-210ENST00000541157 NEUROD2Q15784 382 aa13.12□□□□□ -0.31
MRE11-210ENST00000541157 NFE2L2Q16236 605 aa13.12□□□□□ -0.31
MRE11-210ENST00000541157 WDR63Q8IWG1 891 aa13.12□□□□□ -0.31
MRE11-210ENST00000541157 COL22A1Q8NFW1 1626 aaPredicted RBP13.12□□□□□ -0.31
MRE11-210ENST00000541157 NCAPD2Q15021 1401 aa13.12□□□□□ -0.31
MRE11-210ENST00000541157 KIAA0232Q92628 1395 aa13.11□□□□□ -0.31
MRE11-210ENST00000541157 COL16A1Q07092 1604 aaPredicted RBP13.11□□□□□ -0.31
MRE11-210ENST00000541157 POTEB2H3BUK9 544 aa13.11□□□□□ -0.31
MRE11-210ENST00000541157 SLFN5Q08AF3 891 aa13.11□□□□□ -0.31
MRE11-210ENST00000541157 TRMT2AQ8IZ69 625 aaKnown RBP13.11□□□□□ -0.31
MRE11-210ENST00000541157 LTV1Q96GA3 475 aaPredicted RBP13.11□□□□□ -0.31
MRE11-210ENST00000541157 LMO7Q8WWI1 1683 aa13.1□□□□□ -0.31
MRE11-210ENST00000541157 E9PSI1 815 aa13.1□□□□□ -0.31
MRE11-210ENST00000541157 RIPK4P57078 832 aa13.1□□□□□ -0.31
MRE11-210ENST00000541157 LRRC59Q96AG4 307 aaKnown RBP13.1□□□□□ -0.31
MRE11-210ENST00000541157 PHLPP1O60346 1717 aa13.1□□□□□ -0.31
MRE11-210ENST00000541157 DUSP27Q5VZP5 1158 aa13.09□□□□□ -0.31
MRE11-210ENST00000541157 LHX8Q68G74 356 aa13.09□□□□□ -0.31
MRE11-210ENST00000541157 DPY19L2Q6NUT2 758 aa13.09□□□□□ -0.31
MRE11-210ENST00000541157 FBXO22Q8NEZ5 403 aa13.09□□□□□ -0.31
MRE11-210ENST00000541157 ANKRD24Q8TF21 1146 aa13.09□□□□□ -0.31
MRE11-210ENST00000541157 AXIN2Q9Y2T1 843 aa13.09□□□□□ -0.31
MRE11-210ENST00000541157 ERBB3P21860 1342 aa13.09□□□□□ -0.31
MRE11-210ENST00000541157 FAM208AQ9UK61 1670 aaKnown RBP13.08□□□□□ -0.31
MRE11-210ENST00000541157 NBPF6Q5VWK0 638 aa13.08□□□□□ -0.32
MRE11-210ENST00000541157 MS4A4AQ96JQ5 239 aa13.08□□□□□ -0.32
MRE11-210ENST00000541157 NBPF4Q96M43 638 aa13.08□□□□□ -0.32
MRE11-210ENST00000541157 GTF3C3Q9Y5Q9 886 aa13.08□□□□□ -0.32
MRE11-210ENST00000541157 IL16Q14005 1332 aa13.08□□□□□ -0.32
MRE11-210ENST00000541157 RGPD5Q99666 1765 aa13.07□□□□□ -0.32
MRE11-210ENST00000541157 UBAP1LF5GYI3 381 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms