RNA–Protein interactions for RNA: ENST00000540849.5

PRICKLE3-205, Transcript of prickle planar cell polarity protein 3, humanhuman

TSL 2

Gene PRICKLE3, Length 2,246 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3-205ENST00000540849 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.5■□□□□ 0.23
PRICKLE3-205ENST00000540849 ROBO2Q9HCK4 1378 aa16.5■□□□□ 0.23
PRICKLE3-205ENST00000540849 EIF5BO60841 1220 aaKnown RBP16.5■□□□□ 0.23
PRICKLE3-205ENST00000540849 HAP1P54257 671 aaPredicted RBP16.5■□□□□ 0.23
PRICKLE3-205ENST00000540849 GAS2L2Q8NHY3 880 aa16.5■□□□□ 0.23
PRICKLE3-205ENST00000540849 GBP4Q96PP9 640 aa16.5■□□□□ 0.23
PRICKLE3-205ENST00000540849 MRE11P49959 708 aa16.49■□□□□ 0.23
PRICKLE3-205ENST00000540849 TTC21BQ7Z4L5 1316 aa16.49■□□□□ 0.23
PRICKLE3-205ENST00000540849 CHL1O00533 1208 aa16.49■□□□□ 0.23
PRICKLE3-205ENST00000540849 HSP90AA1P07900 732 aaKnown RBP16.49■□□□□ 0.23
PRICKLE3-205ENST00000540849 MCM10Q7L590 875 aa16.49■□□□□ 0.23
PRICKLE3-205ENST00000540849 C16orf71Q8IYS4 520 aaPredicted RBP16.49■□□□□ 0.23
PRICKLE3-205ENST00000540849 KIAA0232Q92628 1395 aa16.48■□□□□ 0.23
PRICKLE3-205ENST00000540849 CEP85Q6P2H3 762 aa16.48■□□□□ 0.23
PRICKLE3-205ENST00000540849 UBR1Q8IWV7 1749 aa16.48■□□□□ 0.23
PRICKLE3-205ENST00000540849 OTUD7AQ8TE49 926 aaPredicted RBP16.47■□□□□ 0.23
PRICKLE3-205ENST00000540849 GRPEL1Q9HAV7 217 aa16.47■□□□□ 0.23
PRICKLE3-205ENST00000540849 RTL1A6NKG5 1358 aa16.47■□□□□ 0.23
PRICKLE3-205ENST00000540849 ESF1Q9H501 851 aaKnown RBP16.47■□□□□ 0.23
PRICKLE3-205ENST00000540849 SSFA2P28290 1259 aa16.46■□□□□ 0.23
PRICKLE3-205ENST00000540849 CRB1P82279 1406 aa16.46■□□□□ 0.23
PRICKLE3-205ENST00000540849 RIMS1Q86UR5 1692 aaKnown RBP16.46■□□□□ 0.23
PRICKLE3-205ENST00000540849 ADAMTS13Q76LX8 1427 aa16.46■□□□□ 0.23
PRICKLE3-205ENST00000540849 ACEP12821 1306 aa16.45■□□□□ 0.22
PRICKLE3-205ENST00000540849 KIF13AQ9H1H9 1805 aa16.45■□□□□ 0.22
PRICKLE3-205ENST00000540849 USP6P35125 1406 aa16.45■□□□□ 0.22
PRICKLE3-205ENST00000540849 RPAP2Q8IXW5 612 aaPredicted RBP16.45■□□□□ 0.22
PRICKLE3-205ENST00000540849 ISY1Q9ULR0 285 aaKnown RBP16.45■□□□□ 0.22
PRICKLE3-205ENST00000540849 TNRQ92752 1358 aa16.45■□□□□ 0.22
PRICKLE3-205ENST00000540849 PTPRCP08575 1304 aa16.45■□□□□ 0.22
PRICKLE3-205ENST00000540849 FMN2Q9NZ56 1722 aa16.45■□□□□ 0.22
PRICKLE3-205ENST00000540849 MEIS3Q99687 375 aa16.45■□□□□ 0.22
PRICKLE3-205ENST00000540849 SMARCA5O60264 1052 aaPredicted RBP16.44■□□□□ 0.22
PRICKLE3-205ENST00000540849 PTMSP20962 102 aa16.44■□□□□ 0.22
PRICKLE3-205ENST00000540849 RABEP1Q15276 862 aa16.44■□□□□ 0.22
PRICKLE3-205ENST00000540849 HSP90AB2PQ58FF8 381 aa16.44■□□□□ 0.22
PRICKLE3-205ENST00000540849 TMEM2Q9UHN6 1383 aa16.44■□□□□ 0.22
PRICKLE3-205ENST00000540849 USP31Q70CQ4 1352 aa16.43■□□□□ 0.22
PRICKLE3-205ENST00000540849 GAS2L3Q86XJ1 694 aa16.43■□□□□ 0.22
PRICKLE3-205ENST00000540849 USP26Q9BXU7 913 aa16.43■□□□□ 0.22
PRICKLE3-205ENST00000540849 SKOR2Q2VWA4 1001 aaPredicted RBP16.43■□□□□ 0.22
PRICKLE3-205ENST00000540849 NUTM2FA1L443 756 aa16.42■□□□□ 0.22
PRICKLE3-205ENST00000540849 SDSP20132 328 aa16.42■□□□□ 0.22
PRICKLE3-205ENST00000540849 PLEKHG3A1L390 1219 aa16.42■□□□□ 0.22
PRICKLE3-205ENST00000540849 APBB1O00213 710 aa16.42■□□□□ 0.22
PRICKLE3-205ENST00000540849 ARHGEF10O15013 1369 aa16.41■□□□□ 0.22
PRICKLE3-205ENST00000540849 CLEC17AQ6ZS10 378 aa16.41■□□□□ 0.22
PRICKLE3-205ENST00000540849 MAP3K19Q56UN5 1328 aa16.4■□□□□ 0.22
PRICKLE3-205ENST00000540849 SSH2Q76I76 1423 aa16.4■□□□□ 0.22
PRICKLE3-205ENST00000540849 MIS18AQ9NYP9 233 aa16.4■□□□□ 0.22
PRICKLE3-205ENST00000540849 AK9Q5TCS8 1911 aa16.4■□□□□ 0.22
PRICKLE3-205ENST00000540849 SOX12O15370 315 aa16.39■□□□□ 0.22
PRICKLE3-205ENST00000540849 SLC4A2P04920 1241 aa16.39■□□□□ 0.22
PRICKLE3-205ENST00000540849 FOXO3O43524 673 aa16.39■□□□□ 0.21
PRICKLE3-205ENST00000540849 BAG4O95429 457 aaKnown RBP16.39■□□□□ 0.21
PRICKLE3-205ENST00000540849 G2E3Q7L622 706 aa16.39■□□□□ 0.21
PRICKLE3-205ENST00000540849 PTPRUQ92729 1446 aa16.38■□□□□ 0.21
PRICKLE3-205ENST00000540849 CLCN1P35523 988 aa16.38■□□□□ 0.21
PRICKLE3-205ENST00000540849 MTHFSDQ2M296 383 aaKnown RBP16.38■□□□□ 0.21
PRICKLE3-205ENST00000540849 CASC1Q6TDU7 716 aa16.37■□□□□ 0.21
PRICKLE3-205ENST00000540849 PLEKHG1Q9ULL1 1385 aa16.37■□□□□ 0.21
PRICKLE3-205ENST00000540849 CEP170BQ9Y4F5 1589 aaPredicted RBP16.37■□□□□ 0.21
PRICKLE3-205ENST00000540849 FAM208AQ9UK61 1670 aaKnown RBP16.37■□□□□ 0.21
PRICKLE3-205ENST00000540849 F6X3S4 739 aa16.37■□□□□ 0.21
PRICKLE3-205ENST00000540849 LRRC37A3O60309 1634 aa16.37■□□□□ 0.21
PRICKLE3-205ENST00000540849 CYP2E1P05181 493 aaPredicted RBP16.37■□□□□ 0.21
PRICKLE3-205ENST00000540849 TSPYL4Q9UJ04 414 aa16.37■□□□□ 0.21
PRICKLE3-205ENST00000540849 TUBGCP6Q96RT7 1819 aa16.36■□□□□ 0.21
PRICKLE3-205ENST00000540849 GOLGA6L22H0YM25 854 aa16.36■□□□□ 0.21
PRICKLE3-205ENST00000540849 LTKP29376 864 aa16.35■□□□□ 0.21
PRICKLE3-205ENST00000540849 SLC4A10Q6U841 1118 aa16.35■□□□□ 0.21
PRICKLE3-205ENST00000540849 SBNO1A3KN83 1393 aa16.35■□□□□ 0.21
PRICKLE3-205ENST00000540849 KDRP35968 1356 aa16.35■□□□□ 0.21
PRICKLE3-205ENST00000540849 KLHL40Q2TBA0 621 aa16.35■□□□□ 0.21
PRICKLE3-205ENST00000540849 XRN1Q8IZH2 1706 aaKnown RBP16.34■□□□□ 0.21
PRICKLE3-205ENST00000540849 FLT4P35916 1363 aa16.34■□□□□ 0.21
PRICKLE3-205ENST00000540849 ERBB4Q15303 1308 aa16.34■□□□□ 0.21
PRICKLE3-205ENST00000540849 HMMRO75330 724 aa16.34■□□□□ 0.21
PRICKLE3-205ENST00000540849 CCT4P50991 539 aaKnown RBP16.34■□□□□ 0.21
PRICKLE3-205ENST00000540849 NUCB2P80303 420 aa16.34■□□□□ 0.21
PRICKLE3-205ENST00000540849 PKP1Q13835 747 aa16.34■□□□□ 0.21
PRICKLE3-205ENST00000540849 RTF1Q92541 710 aaKnown RBP16.34■□□□□ 0.21
PRICKLE3-205ENST00000540849 OSBPL3Q9H4L5 887 aa16.34■□□□□ 0.21
PRICKLE3-205ENST00000540849 PIK3C2AO00443 1686 aa16.34■□□□□ 0.21
PRICKLE3-205ENST00000540849 TTC21AQ8NDW8 1320 aa16.33■□□□□ 0.21
PRICKLE3-205ENST00000540849 REC8O95072 547 aa16.33■□□□□ 0.2
PRICKLE3-205ENST00000540849 PDE1AP54750 535 aa16.33■□□□□ 0.2
PRICKLE3-205ENST00000540849 DDX49Q9Y6V7 483 aaKnown RBP16.33■□□□□ 0.2
PRICKLE3-205ENST00000540849 IBTKQ9P2D0 1353 aaPredicted RBP16.33■□□□□ 0.2
PRICKLE3-205ENST00000540849 ERC2O15083 957 aa16.33■□□□□ 0.2
PRICKLE3-205ENST00000540849 MCTP1Q6DN14 999 aa16.33■□□□□ 0.2
PRICKLE3-205ENST00000540849 ZGPATQ8N5A5 531 aaKnown RBP16.33■□□□□ 0.2
PRICKLE3-205ENST00000540849 IGSF1Q8N6C5 1336 aa16.32■□□□□ 0.2
PRICKLE3-205ENST00000540849 RGPD8O14715 1765 aaPredicted RBP16.32■□□□□ 0.2
PRICKLE3-205ENST00000540849 ST18O60284 1047 aa16.32■□□□□ 0.2
PRICKLE3-205ENST00000540849 SALL3Q9BXA9 1300 aa16.32■□□□□ 0.2
PRICKLE3-205ENST00000540849 ESPNB1AK53 854 aa16.31■□□□□ 0.2
PRICKLE3-205ENST00000540849 DIP2AQ14689 1571 aa16.31■□□□□ 0.2
PRICKLE3-205ENST00000540849 SLC26A8Q96RN1 970 aa16.31■□□□□ 0.2
PRICKLE3-205ENST00000540849 EYA1Q99502 592 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms