RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 SPRYD3Q8NCJ5 442 aa14.28□□□□□ -0.12
LGR5-203ENST00000540815 ABCC4O15439 1325 aa14.27□□□□□ -0.12
LGR5-203ENST00000540815 SEC24BO95487 1268 aa14.26□□□□□ -0.13
LGR5-203ENST00000540815 ZBTB7BO15156 539 aaPredicted RBP14.26□□□□□ -0.13
LGR5-203ENST00000540815 ADAMTSL3P82987 1691 aa14.26□□□□□ -0.13
LGR5-203ENST00000540815 KDRP35968 1356 aa14.25□□□□□ -0.13
LGR5-203ENST00000540815 CHL1O00533 1208 aa14.25□□□□□ -0.13
LGR5-203ENST00000540815 PANK2Q9BZ23 570 aa14.25□□□□□ -0.13
LGR5-203ENST00000540815 KIF24Q5T7B8 1368 aa14.25□□□□□ -0.13
LGR5-203ENST00000540815 KIAA0232Q92628 1395 aa14.25□□□□□ -0.13
LGR5-203ENST00000540815 API5Q9BZZ5 524 aaKnown RBP14.25□□□□□ -0.13
LGR5-203ENST00000540815 HAP1P54257 671 aaPredicted RBP14.24□□□□□ -0.13
LGR5-203ENST00000540815 MCM10Q7L590 875 aa14.24□□□□□ -0.13
LGR5-203ENST00000540815 CRB1P82279 1406 aa14.24□□□□□ -0.13
LGR5-203ENST00000540815 KRT24Q2M2I5 525 aa14.24□□□□□ -0.13
LGR5-203ENST00000540815 IGSF1Q8N6C5 1336 aa14.24□□□□□ -0.13
LGR5-203ENST00000540815 RBM33Q96EV2 1170 aaKnown RBP14.23□□□□□ -0.13
LGR5-203ENST00000540815 AMPHP49418 695 aa14.23□□□□□ -0.13
LGR5-203ENST00000540815 HSP90AA2PQ14568 343 aaPredicted RBP14.23□□□□□ -0.13
LGR5-203ENST00000540815 ANKLE2Q86XL3 938 aa14.23□□□□□ -0.13
LGR5-203ENST00000540815 NUCB1Q02818 461 aa14.23□□□□□ -0.13
LGR5-203ENST00000540815 NUTM2GQ5VZR2 741 aa14.23□□□□□ -0.13
LGR5-203ENST00000540815 FOXO3O43524 673 aa14.22□□□□□ -0.13
LGR5-203ENST00000540815 NLRP6P59044 892 aa14.22□□□□□ -0.13
LGR5-203ENST00000540815 EYA1Q99502 592 aa14.22□□□□□ -0.13
LGR5-203ENST00000540815 UPF2Q9HAU5 1272 aaKnown RBP14.22□□□□□ -0.13
LGR5-203ENST00000540815 NWD1Q149M9 1564 aa14.22□□□□□ -0.13
LGR5-203ENST00000540815 MTHFSDQ2M296 383 aaKnown RBP14.21□□□□□ -0.14
LGR5-203ENST00000540815 LRRC37A3O60309 1634 aa14.2□□□□□ -0.14
LGR5-203ENST00000540815 GCC1Q96CN9 775 aa14.2□□□□□ -0.14
LGR5-203ENST00000540815 GLIPR1L2Q4G1C9 344 aa14.2□□□□□ -0.14
LGR5-203ENST00000540815 TBC1D32Q96NH3 1257 aa14.2□□□□□ -0.14
LGR5-203ENST00000540815 SETD1BQ9UPS6 1966 aaKnown RBP14.2□□□□□ -0.14
LGR5-203ENST00000540815 GAS2L2Q8NHY3 880 aa14.19□□□□□ -0.14
LGR5-203ENST00000540815 RGS12O14924 1447 aa14.19□□□□□ -0.14
LGR5-203ENST00000540815 HOXC9P31274 260 aa14.19□□□□□ -0.14
LGR5-203ENST00000540815 CHD1LQ86WJ1 897 aa14.19□□□□□ -0.14
LGR5-203ENST00000540815 RTF1Q92541 710 aaKnown RBP14.19□□□□□ -0.14
LGR5-203ENST00000540815 C1orf115Q9H7X2 142 aa14.19□□□□□ -0.14
LGR5-203ENST00000540815 HTATSF1O43719 755 aaKnown RBP14.18□□□□□ -0.14
LGR5-203ENST00000540815 INTS3Q68E01 1043 aaKnown RBP14.18□□□□□ -0.14
LGR5-203ENST00000540815 ABTB2Q8N961 1025 aa14.18□□□□□ -0.14
LGR5-203ENST00000540815 PHF8Q9UPP1 1060 aa14.18□□□□□ -0.14
LGR5-203ENST00000540815 LTN1O94822 1766 aa14.18□□□□□ -0.14
LGR5-203ENST00000540815 RTL1A6NKG5 1358 aa14.18□□□□□ -0.14
LGR5-203ENST00000540815 ADGRL3Q9HAR2 1447 aa14.17□□□□□ -0.14
LGR5-203ENST00000540815 SIRT2Q8IXJ6 389 aa14.17□□□□□ -0.14
LGR5-203ENST00000540815 PTPRCP08575 1304 aa14.17□□□□□ -0.14
LGR5-203ENST00000540815 BECN1Q14457 450 aa14.17□□□□□ -0.14
LGR5-203ENST00000540815 MIS18AQ9NYP9 233 aa14.17□□□□□ -0.14
LGR5-203ENST00000540815 HSP90AA1P07900 732 aaKnown RBP14.16□□□□□ -0.14
LGR5-203ENST00000540815 XRCC6P12956 609 aaKnown RBP eCLIP14.16□□□□□ -0.14
LGR5-203ENST00000540815 LNPKQ9C0E8 428 aa14.16□□□□□ -0.14
LGR5-203ENST00000540815 NFAT5O94916 1531 aa14.15□□□□□ -0.14
LGR5-203ENST00000540815 TSPYL4Q9UJ04 414 aa14.15□□□□□ -0.14
LGR5-203ENST00000540815 NPHP4O75161 1426 aaPredicted RBP14.15□□□□□ -0.14
LGR5-203ENST00000540815 PODXL2Q9NZ53 605 aa14.14□□□□□ -0.15
LGR5-203ENST00000540815 ANKRD45Q5TZF3 282 aa14.14□□□□□ -0.15
LGR5-203ENST00000540815 PHRF1Q9P1Y6 1649 aaKnown RBP14.13□□□□□ -0.15
LGR5-203ENST00000540815 A0A0U1RQG5 324 aaPredicted RBP14.13□□□□□ -0.15
LGR5-203ENST00000540815 GNAT3A8MTJ3 354 aa14.13□□□□□ -0.15
LGR5-203ENST00000540815 BMP2KLQ5H9B9 411 aa14.13□□□□□ -0.15
LGR5-203ENST00000540815 LTV1Q96GA3 475 aaPredicted RBP14.12□□□□□ -0.15
LGR5-203ENST00000540815 ARID3AQ99856 593 aa14.12□□□□□ -0.15
LGR5-203ENST00000540815 MSH6P52701 1360 aa14.12□□□□□ -0.15
LGR5-203ENST00000540815 MAP3K5Q99683 1374 aa14.12□□□□□ -0.15
LGR5-203ENST00000540815 C14orf37Q86TY3 774 aa14.12□□□□□ -0.15
LGR5-203ENST00000540815 ATP10DQ9P241 1426 aa14.12□□□□□ -0.15
LGR5-203ENST00000540815 FAM208AQ9UK61 1670 aaKnown RBP14.12□□□□□ -0.15
LGR5-203ENST00000540815 SLC4A2P04920 1241 aa14.11□□□□□ -0.15
LGR5-203ENST00000540815 ESCO1Q5FWF5 840 aa14.11□□□□□ -0.15
LGR5-203ENST00000540815 C22orf23Q9BZE7 217 aa14.11□□□□□ -0.15
LGR5-203ENST00000540815 MFAP1P55081 439 aaKnown RBP14.11□□□□□ -0.15
LGR5-203ENST00000540815 USHBP1Q8N6Y0 703 aa14.11□□□□□ -0.15
LGR5-203ENST00000540815 IP6K1Q92551 441 aa14.11□□□□□ -0.15
LGR5-203ENST00000540815 CACNA1FO60840 1977 aa14.1□□□□□ -0.15
LGR5-203ENST00000540815 ANKRD44Q8N8A2 993 aa14.1□□□□□ -0.15
LGR5-203ENST00000540815 DCTPP1Q9H773 170 aa14.1□□□□□ -0.15
LGR5-203ENST00000540815 BABAM1Q9NWV8 329 aa14.1□□□□□ -0.15
LGR5-203ENST00000540815 RPAP2Q8IXW5 612 aaPredicted RBP14.1□□□□□ -0.15
LGR5-203ENST00000540815 SOS1Q07889 1333 aaPredicted RBP14.1□□□□□ -0.15
LGR5-203ENST00000540815 PSME1Q06323 249 aa14.1□□□□□ -0.15
LGR5-203ENST00000540815 G2E3Q7L622 706 aa14.1□□□□□ -0.15
LGR5-203ENST00000540815 IL17REQ8NFR9 667 aa14.1□□□□□ -0.15
LGR5-203ENST00000540815 ORAI2Q96SN7 254 aa14.1□□□□□ -0.15
LGR5-203ENST00000540815 KCNH5Q8NCM2 988 aa14.09□□□□□ -0.15
LGR5-203ENST00000540815 RGPD2P0DJD1 1756 aa14.09□□□□□ -0.15
LGR5-203ENST00000540815 TBC1D2Q9BYX2 928 aa14.08□□□□□ -0.16
LGR5-203ENST00000540815 CEP85Q6P2H3 762 aa14.08□□□□□ -0.16
LGR5-203ENST00000540815 N4BP2Q86UW6 1770 aaPredicted RBP14.08□□□□□ -0.16
LGR5-203ENST00000540815 SLIT3O75094 1523 aa14.07□□□□□ -0.16
LGR5-203ENST00000540815 CCT4P50991 539 aaKnown RBP14.07□□□□□ -0.16
LGR5-203ENST00000540815 XPCQ01831 940 aaPredicted RBP14.07□□□□□ -0.16
LGR5-203ENST00000540815 NBPF6Q5VWK0 638 aa14.07□□□□□ -0.16
LGR5-203ENST00000540815 NBPF4Q96M43 638 aa14.07□□□□□ -0.16
LGR5-203ENST00000540815 TAF7Q15545 349 aaPredicted RBP14.07□□□□□ -0.16
LGR5-203ENST00000540815 STK31Q9BXU1 1019 aa14.07□□□□□ -0.16
LGR5-203ENST00000540815 ERBB4Q15303 1308 aa14.07□□□□□ -0.16
LGR5-203ENST00000540815 CCDC30Q5VVM6 783 aa14.06□□□□□ -0.16
LGR5-203ENST00000540815 MEIS3Q99687 375 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms