RNA–Protein interactions for RNA: ENST00000540415.1

LRP6-204, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 473 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-204ENST00000540415 CD163L1Q9NR16 1453 aa11.52□□□□□ -0.56
LRP6-204ENST00000540415 SMIM5Q71RC9 77 aa11.52□□□□□ -0.57
LRP6-204ENST00000540415 KIF3CO14782 793 aa11.51□□□□□ -0.57
LRP6-204ENST00000540415 AMIGO3Q86WK7 504 aa11.51□□□□□ -0.57
LRP6-204ENST00000540415 L3MBTL2Q969R5 705 aa11.51□□□□□ -0.57
LRP6-204ENST00000540415 FBLN1P23142 703 aa11.5□□□□□ -0.57
LRP6-204ENST00000540415 IP6K1Q92551 441 aa11.49□□□□□ -0.57
LRP6-204ENST00000540415 CD2APQ9Y5K6 639 aa11.49□□□□□ -0.57
LRP6-204ENST00000540415 MEGF6O75095 1541 aa11.49□□□□□ -0.57
LRP6-204ENST00000540415 MON2Q7Z3U7 1717 aa11.49□□□□□ -0.57
LRP6-204ENST00000540415 DOT1LQ8TEK3 1739 aa11.49□□□□□ -0.57
LRP6-204ENST00000540415 ZCRB1Q8TBF4 217 aaKnown RBP11.48□□□□□ -0.57
LRP6-204ENST00000540415 TMC1Q8TDI8 760 aa11.48□□□□□ -0.57
LRP6-204ENST00000540415 SLC12A5Q9H2X9 1139 aa11.48□□□□□ -0.57
LRP6-204ENST00000540415 IGSF1Q8N6C5 1336 aa11.48□□□□□ -0.57
LRP6-204ENST00000540415 LY75O60449 1722 aa11.48□□□□□ -0.57
LRP6-204ENST00000540415 LTN1O94822 1766 aa11.48□□□□□ -0.57
LRP6-204ENST00000540415 USP54Q70EL1 1684 aa11.47□□□□□ -0.57
LRP6-204ENST00000540415 ROCK2O75116 1388 aaKnown RBP11.47□□□□□ -0.57
LRP6-204ENST00000540415 USP47Q96K76 1375 aa11.47□□□□□ -0.57
LRP6-204ENST00000540415 USHBP1Q8N6Y0 703 aa11.47□□□□□ -0.57
LRP6-204ENST00000540415 DNAJC5GQ8N7S2 189 aa11.47□□□□□ -0.57
LRP6-204ENST00000540415 KAT6BQ8WYB5 2073 aa11.46□□□□□ -0.57
LRP6-204ENST00000540415 FAM208AQ9UK61 1670 aaKnown RBP11.46□□□□□ -0.58
LRP6-204ENST00000540415 A0A1W2PP64 1363 aa11.45□□□□□ -0.58
LRP6-204ENST00000540415 MAP3K19Q56UN5 1328 aa11.45□□□□□ -0.58
LRP6-204ENST00000540415 HOXC9P31274 260 aa11.45□□□□□ -0.58
LRP6-204ENST00000540415 HTRA3P83110 453 aa11.45□□□□□ -0.58
LRP6-204ENST00000540415 SIN3AQ96ST3 1273 aa11.45□□□□□ -0.58
LRP6-204ENST00000540415 EDC4Q6P2E9 1401 aaKnown RBP11.44□□□□□ -0.58
LRP6-204ENST00000540415 CAPN15O75808 1086 aa11.44□□□□□ -0.58
LRP6-204ENST00000540415 PHF14O94880 888 aa11.44□□□□□ -0.58
LRP6-204ENST00000540415 NBPF6Q5VWK0 638 aa11.44□□□□□ -0.58
LRP6-204ENST00000540415 HDGFL2Q7Z4V5 671 aaPredicted RBP11.44□□□□□ -0.58
LRP6-204ENST00000540415 NBPF4Q96M43 638 aa11.44□□□□□ -0.58
LRP6-204ENST00000540415 PALLDQ8WX93 1383 aa11.43□□□□□ -0.58
LRP6-204ENST00000540415 APLP1P51693 650 aa11.43□□□□□ -0.58
LRP6-204ENST00000540415 COL13A1Q5TAT6 717 aaPredicted RBP11.43□□□□□ -0.58
LRP6-204ENST00000540415 NMRK2Q9NPI5 230 aa11.42□□□□□ -0.58
LRP6-204ENST00000540415 PCNTO95613 3336 aa11.42□□□□□ -0.58
LRP6-204ENST00000540415 TOGARAM1Q9Y4F4 1720 aa11.41□□□□□ -0.58
LRP6-204ENST00000540415 C5P01031 1676 aa11.41□□□□□ -0.58
LRP6-204ENST00000540415 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.41□□□□□ -0.58
LRP6-204ENST00000540415 AMPHP49418 695 aa11.41□□□□□ -0.58
LRP6-204ENST00000540415 MPRIPQ6WCQ1 1025 aa11.41□□□□□ -0.58
LRP6-204ENST00000540415 FLAD1Q8NFF5 587 aa11.41□□□□□ -0.58
LRP6-204ENST00000540415 RRS1Q15050 365 aaKnown RBP11.4□□□□□ -0.58
LRP6-204ENST00000540415 AK7Q96M32 723 aa11.4□□□□□ -0.58
LRP6-204ENST00000540415 RGPD2P0DJD1 1756 aa11.39□□□□□ -0.59
LRP6-204ENST00000540415 CYP27B1O15528 508 aa11.39□□□□□ -0.59
LRP6-204ENST00000540415 TOMM70O94826 608 aa11.39□□□□□ -0.59
LRP6-204ENST00000540415 NEUROD1Q13562 356 aa11.39□□□□□ -0.59
LRP6-204ENST00000540415 LINC00116Q8NCU8 138 aa11.39□□□□□ -0.59
LRP6-204ENST00000540415 TERF2IPQ9NYB0 399 aa11.39□□□□□ -0.59
LRP6-204ENST00000540415 PXDNLA1KZ92 1463 aa11.38□□□□□ -0.59
LRP6-204ENST00000540415 C4BP0C0L5 1744 aa11.38□□□□□ -0.59
LRP6-204ENST00000540415 COG3Q96JB2 828 aa11.38□□□□□ -0.59
LRP6-204ENST00000540415 CICQ96RK0 1608 aaPredicted RBP11.38□□□□□ -0.59
LRP6-204ENST00000540415 A0A0G2JLW4 131 aa11.37□□□□□ -0.59
LRP6-204ENST00000540415 RAPGEF4Q8WZA2 1011 aa11.37□□□□□ -0.59
LRP6-204ENST00000540415 PIGBQ92521 554 aa11.37□□□□□ -0.59
LRP6-204ENST00000540415 BCS1LQ9Y276 419 aa11.37□□□□□ -0.59
LRP6-204ENST00000540415 MMP10P09238 476 aa11.36□□□□□ -0.59
LRP6-204ENST00000540415 TATP17735 454 aaPredicted RBP11.36□□□□□ -0.59
LRP6-204ENST00000540415 ITPK1Q13572 414 aa11.36□□□□□ -0.59
LRP6-204ENST00000540415 HSP90AB2PQ58FF8 381 aa11.36□□□□□ -0.59
LRP6-204ENST00000540415 KLRG1Q96E93 195 aa11.36□□□□□ -0.59
LRP6-204ENST00000540415 CARD11Q9BXL7 1154 aa11.36□□□□□ -0.59
LRP6-204ENST00000540415 PCDH11XQ9BZA7 1347 aa11.35□□□□□ -0.59
LRP6-204ENST00000540415 PCDH11YQ9BZA8 1340 aa11.35□□□□□ -0.59
LRP6-204ENST00000540415 GNPATO15228 680 aa11.35□□□□□ -0.59
LRP6-204ENST00000540415 SSFA2P28290 1259 aa11.35□□□□□ -0.59
LRP6-204ENST00000540415 ARHGAP27Q6ZUM4 889 aa11.35□□□□□ -0.59
LRP6-204ENST00000540415 TAF1LQ8IZX4 1826 aa11.35□□□□□ -0.59
LRP6-204ENST00000540415 CGNL1Q0VF96 1302 aa11.35□□□□□ -0.59
LRP6-204ENST00000540415 RTL1A6NKG5 1358 aa11.34□□□□□ -0.59
LRP6-204ENST00000540415 LOC102724428A0A0B4J2F2 783 aa11.34□□□□□ -0.59
LRP6-204ENST00000540415 SIK1P57059 783 aa11.34□□□□□ -0.59
LRP6-204ENST00000540415 TNS4Q8IZW8 715 aa11.34□□□□□ -0.59
LRP6-204ENST00000540415 JMYQ8N9B5 988 aa11.34□□□□□ -0.59
LRP6-204ENST00000540415 SMARCC1Q92922 1105 aaPredicted RBP11.34□□□□□ -0.59
LRP6-204ENST00000540415 GGNBP2Q9H3C7 697 aa11.34□□□□□ -0.59
LRP6-204ENST00000540415 UBR3Q6ZT12 1888 aa11.34□□□□□ -0.59
LRP6-204ENST00000540415 KIAA1551Q9HCM1 1747 aa11.33□□□□□ -0.6
LRP6-204ENST00000540415 DPEP1P16444 411 aa11.33□□□□□ -0.6
LRP6-204ENST00000540415 C9orf131Q5VYM1 1079 aa11.33□□□□□ -0.6
LRP6-204ENST00000540415 RBM46Q8TBY0 533 aaKnown RBP11.33□□□□□ -0.6
LRP6-204ENST00000540415 ASAP1Q9ULH1 1129 aa11.33□□□□□ -0.6
LRP6-204ENST00000540415 WDR90Q96KV7 1748 aa11.32□□□□□ -0.6
LRP6-204ENST00000540415 FCHSD2O94868 740 aa11.32□□□□□ -0.6
LRP6-204ENST00000540415 C10orf71Q711Q0 1435 aa11.32□□□□□ -0.6
LRP6-204ENST00000540415 KCPQ6ZWJ8 1503 aa11.31□□□□□ -0.6
LRP6-204ENST00000540415 FYB1O15117 783 aa11.31□□□□□ -0.6
LRP6-204ENST00000540415 PRELPP51888 382 aa11.31□□□□□ -0.6
LRP6-204ENST00000540415 TESK2Q96S53 571 aa11.31□□□□□ -0.6
LRP6-204ENST00000540415 SMG6Q86US8 1419 aaKnown RBP11.31□□□□□ -0.6
LRP6-204ENST00000540415 NSD3Q9BZ95 1437 aa11.31□□□□□ -0.6
LRP6-204ENST00000540415 KCNA3P22001 575 aa11.3□□□□□ -0.6
LRP6-204ENST00000540415 ATP6V1AP38606 617 aa11.3□□□□□ -0.6
LRP6-204ENST00000540415 TGFB2P61812 414 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms