RNA–Protein interactions for RNA: ENST00000540162.5

MRPL48-209, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 5

Gene MRPL48, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-209ENST00000540162 CCNL1Q9UK58 526 aaPredicted RBP16.34■□□□□ 0.21
MRPL48-209ENST00000540162 COL23A1Q86Y22 540 aaPredicted RBP16.33■□□□□ 0.2
MRPL48-209ENST00000540162 NSD2O96028 1365 aa16.33■□□□□ 0.2
MRPL48-209ENST00000540162 USP54Q70EL1 1684 aa16.33■□□□□ 0.2
MRPL48-209ENST00000540162 ST20-MTHFSA0A0A6YYL1 179 aa16.32■□□□□ 0.2
MRPL48-209ENST00000540162 GIGYF1O75420 1035 aaPredicted RBP16.32■□□□□ 0.2
MRPL48-209ENST00000540162 NBPF6Q5VWK0 638 aa16.32■□□□□ 0.2
MRPL48-209ENST00000540162 NBPF4Q96M43 638 aa16.32■□□□□ 0.2
MRPL48-209ENST00000540162 TESK2Q96S53 571 aa16.32■□□□□ 0.2
MRPL48-209ENST00000540162 YBX3P16989 372 aaKnown RBP eCLIP16.31■□□□□ 0.22e-7■■■□□ 17.8
MRPL48-209ENST00000540162 USHBP1Q8N6Y0 703 aa16.31■□□□□ 0.2
MRPL48-209ENST00000540162 LTN1O94822 1766 aa16.31■□□□□ 0.2
MRPL48-209ENST00000540162 RRS1Q15050 365 aaKnown RBP16.3■□□□□ 0.2
MRPL48-209ENST00000540162 MSL1Q68DK7 614 aa16.3■□□□□ 0.2
MRPL48-209ENST00000540162 USP47Q96K76 1375 aa16.29■□□□□ 0.2
MRPL48-209ENST00000540162 GRIN3BO60391 1043 aa16.29■□□□□ 0.2
MRPL48-209ENST00000540162 MEGF6O75095 1541 aa16.29■□□□□ 0.2
MRPL48-209ENST00000540162 TONSLQ96HA7 1378 aa16.28■□□□□ 0.2
MRPL48-209ENST00000540162 RAPGEF4Q8WZA2 1011 aa16.28■□□□□ 0.2
MRPL48-209ENST00000540162 GGNBP2Q9H3C7 697 aa16.28■□□□□ 0.2
MRPL48-209ENST00000540162 FYB1O15117 783 aa16.27■□□□□ 0.2
MRPL48-209ENST00000540162 GOLGB1Q14789 3259 aaKnown RBP16.27■□□□□ 0.19
MRPL48-209ENST00000540162 TATP17735 454 aaPredicted RBP16.26■□□□□ 0.19
MRPL48-209ENST00000540162 CGNL1Q0VF96 1302 aa16.25■□□□□ 0.19
MRPL48-209ENST00000540162 SLC24A1O60721 1099 aa16.25■□□□□ 0.19
MRPL48-209ENST00000540162 HSP90AB2PQ58FF8 381 aa16.25■□□□□ 0.19
MRPL48-209ENST00000540162 MPRIPQ6WCQ1 1025 aa16.25■□□□□ 0.19
MRPL48-209ENST00000540162 FLAD1Q8NFF5 587 aa16.23■□□□□ 0.19
MRPL48-209ENST00000540162 CD2APQ9Y5K6 639 aa16.23■□□□□ 0.19
MRPL48-209ENST00000540162 RTL1A6NKG5 1358 aa16.23■□□□□ 0.19
MRPL48-209ENST00000540162 FAM208AQ9UK61 1670 aaKnown RBP16.22■□□□□ 0.19
MRPL48-209ENST00000540162 CHD4Q14839 1912 aa16.21■□□□□ 0.19
MRPL48-209ENST00000540162 CYP27B1O15528 508 aa16.21■□□□□ 0.19
MRPL48-209ENST00000540162 SMIM5Q71RC9 77 aa16.21■□□□□ 0.19
MRPL48-209ENST00000540162 PALLDQ8WX93 1383 aa16.21■□□□□ 0.19
MRPL48-209ENST00000540162 PCDH11XQ9BZA7 1347 aa16.2■□□□□ 0.18
MRPL48-209ENST00000540162 PCDH11YQ9BZA8 1340 aa16.2■□□□□ 0.18
MRPL48-209ENST00000540162 SMG6Q86US8 1419 aaKnown RBP16.2■□□□□ 0.18
MRPL48-209ENST00000540162 KAT6BQ8WYB5 2073 aa16.2■□□□□ 0.18
MRPL48-209ENST00000540162 QSER1Q2KHR3 1735 aa16.2■□□□□ 0.18
MRPL48-209ENST00000540162 DOT1LQ8TEK3 1739 aa16.2■□□□□ 0.18
MRPL48-209ENST00000540162 TMF1P82094 1093 aa16.2■□□□□ 0.18
MRPL48-209ENST00000540162 AMIGO3Q86WK7 504 aa16.2■□□□□ 0.18
MRPL48-209ENST00000540162 COL24A1Q17RW2 1714 aa16.19■□□□□ 0.18
MRPL48-209ENST00000540162 INSRP06213 1382 aa16.19■□□□□ 0.18
MRPL48-209ENST00000540162 HMGB2P26583 209 aaKnown RBP16.19■□□□□ 0.18
MRPL48-209ENST00000540162 LY75O60449 1722 aa16.19■□□□□ 0.18
MRPL48-209ENST00000540162 ATP10DQ9P241 1426 aa16.19■□□□□ 0.18
MRPL48-209ENST00000540162 PHF14O94880 888 aa16.18■□□□□ 0.18
MRPL48-209ENST00000540162 PIGBQ92521 554 aa16.18■□□□□ 0.18
MRPL48-209ENST00000540162 SMARCC1Q92922 1105 aaPredicted RBP16.18■□□□□ 0.18
MRPL48-209ENST00000540162 AK7Q96M32 723 aa16.18■□□□□ 0.18
MRPL48-209ENST00000540162 SHANK3Q9BYB0 1731 aa16.17■□□□□ 0.18
MRPL48-209ENST00000540162 ZNF526Q8TF50 670 aaPredicted RBP16.17■□□□□ 0.18
MRPL48-209ENST00000540162 GPBP1L1Q9HC44 474 aaPredicted RBP16.17■□□□□ 0.18
MRPL48-209ENST00000540162 WWC3Q9ULE0 1092 aa16.17■□□□□ 0.18
MRPL48-209ENST00000540162 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.16■□□□□ 0.18
MRPL48-209ENST00000540162 IFFO2Q5TF58 517 aa16.16■□□□□ 0.18
MRPL48-209ENST00000540162 CARD14Q9BXL6 1004 aa16.16■□□□□ 0.18
MRPL48-209ENST00000540162 EMILIN1Q9Y6C2 1016 aa16.16■□□□□ 0.18
MRPL48-209ENST00000540162 TUBGCP6Q96RT7 1819 aa16.16■□□□□ 0.18
MRPL48-209ENST00000540162 FLT4P35916 1363 aa16.15■□□□□ 0.18
MRPL48-209ENST00000540162 CEP350Q5VT06 3117 aa16.15■□□□□ 0.18
MRPL48-209ENST00000540162 PPM1GO15355 546 aaPredicted RBP16.15■□□□□ 0.18
MRPL48-209ENST00000540162 RGPD2P0DJD1 1756 aa16.15■□□□□ 0.18
MRPL48-209ENST00000540162 NKX1-1Q15270 411 aaPredicted RBP16.14■□□□□ 0.17
MRPL48-209ENST00000540162 LINC00116Q8NCU8 138 aa16.13■□□□□ 0.17
MRPL48-209ENST00000540162 SPG7Q9UQ90 795 aa16.13■□□□□ 0.17
MRPL48-209ENST00000540162 IGSF1Q8N6C5 1336 aa16.13■□□□□ 0.17
MRPL48-209ENST00000540162 KIF24Q5T7B8 1368 aa16.13■□□□□ 0.17
MRPL48-209ENST00000540162 LOC102724428A0A0B4J2F2 783 aa16.12■□□□□ 0.17
MRPL48-209ENST00000540162 SIK1P57059 783 aa16.12■□□□□ 0.17
MRPL48-209ENST00000540162 CDCA8Q53HL2 280 aa16.12■□□□□ 0.17
MRPL48-209ENST00000540162 SSFA2P28290 1259 aa16.11■□□□□ 0.17
MRPL48-209ENST00000540162 ASAP1Q9ULH1 1129 aa16.11■□□□□ 0.17
MRPL48-209ENST00000540162 ITPK1Q13572 414 aa16.1■□□□□ 0.17
MRPL48-209ENST00000540162 EYA1Q99502 592 aa16.1■□□□□ 0.17
MRPL48-209ENST00000540162 TMOD3Q9NYL9 352 aa16.1■□□□□ 0.17
MRPL48-209ENST00000540162 ADCY9O60503 1353 aa16.1■□□□□ 0.17
MRPL48-209ENST00000540162 GNPATO15228 680 aa16.09■□□□□ 0.17
MRPL48-209ENST00000540162 HSPA6P17066 643 aa16.09■□□□□ 0.17
MRPL48-209ENST00000540162 ATP6V1AP38606 617 aa16.09■□□□□ 0.17
MRPL48-209ENST00000540162 C5P01031 1676 aa16.08■□□□□ 0.17
MRPL48-209ENST00000540162 ATG3Q9NT62 314 aa16.08■□□□□ 0.16
MRPL48-209ENST00000540162 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.08■□□□□ 0.16
MRPL48-209ENST00000540162 WASHC2AQ641Q2 1341 aa16.08■□□□□ 0.16
MRPL48-209ENST00000540162 PHKG2P15735 406 aa16.07■□□□□ 0.16
MRPL48-209ENST00000540162 IFNL2Q8IZJ0 200 aa16.07■□□□□ 0.16
MRPL48-209ENST00000540162 NSD3Q9BZ95 1437 aa16.07■□□□□ 0.16
MRPL48-209ENST00000540162 C4BP0C0L5 1744 aa16.07■□□□□ 0.16
MRPL48-209ENST00000540162 MMP10P09238 476 aa16.06■□□□□ 0.16
MRPL48-209ENST00000540162 POLKQ9UBT6 870 aa16.06■□□□□ 0.16
MRPL48-209ENST00000540162 NCAPD2Q15021 1401 aa16.05■□□□□ 0.16
MRPL48-209ENST00000540162 KIF3CO14782 793 aa16.05■□□□□ 0.16
MRPL48-209ENST00000540162 A0A0G2JLW4 131 aa16.04■□□□□ 0.16
MRPL48-209ENST00000540162 TRAPPC3LQ5T215 181 aa16.04■□□□□ 0.16
MRPL48-209ENST00000540162 TOGARAM1Q9Y4F4 1720 aa16.03■□□□□ 0.16
MRPL48-209ENST00000540162 TNNT2P45379 298 aaPredicted RBP16.03■□□□□ 0.16
MRPL48-209ENST00000540162 RTCBQ9Y3I0 505 aaKnown RBP16.03■□□□□ 0.16
MRPL48-209ENST00000540162 TGFB2P61812 414 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms