RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 POGZQ7Z3K3 1410 aa17.11■□□□□ 0.33
SCNN1A-215ENST00000540037 MAP2P11137 1827 aaKnown RBP17.11■□□□□ 0.33
SCNN1A-215ENST00000540037 FOXD4L6Q3SYB3 417 aaPredicted RBP17.11■□□□□ 0.33
SCNN1A-215ENST00000540037 FOXD4L3Q6VB84 417 aaPredicted RBP17.11■□□□□ 0.33
SCNN1A-215ENST00000540037 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.11■□□□□ 0.33
SCNN1A-215ENST00000540037 NOL8Q76FK4 1167 aaKnown RBP17.11■□□□□ 0.33
SCNN1A-215ENST00000540037 PDLIM2Q96JY6 352 aa17.11■□□□□ 0.33
SCNN1A-215ENST00000540037 NOL7Q9UMY1 257 aaKnown RBP17.11■□□□□ 0.33
SCNN1A-215ENST00000540037 CEP85Q6P2H3 762 aa17.1■□□□□ 0.33
SCNN1A-215ENST00000540037 MEIS3Q99687 375 aa17.1■□□□□ 0.33
SCNN1A-215ENST00000540037 NCKAP5LQ9HCH0 1330 aa17.1■□□□□ 0.33
SCNN1A-215ENST00000540037 ATP10DQ9P241 1426 aa17.1■□□□□ 0.33
SCNN1A-215ENST00000540037 ANKRD44Q8N8A2 993 aa17.1■□□□□ 0.33
SCNN1A-215ENST00000540037 ARHGAP31Q2M1Z3 1444 aa17.09■□□□□ 0.33
SCNN1A-215ENST00000540037 CDC42BPGQ6DT37 1551 aa17.09■□□□□ 0.33
SCNN1A-215ENST00000540037 ST18O60284 1047 aa17.09■□□□□ 0.33
SCNN1A-215ENST00000540037 FBXO31Q5XUX0 539 aaPredicted RBP17.09■□□□□ 0.33
SCNN1A-215ENST00000540037 MPNDQ8N594 471 aa17.09■□□□□ 0.33
SCNN1A-215ENST00000540037 KIF20BQ96Q89 1820 aa17.08■□□□□ 0.33
SCNN1A-215ENST00000540037 MSH6P52701 1360 aa17.08■□□□□ 0.32
SCNN1A-215ENST00000540037 AEBP1Q8IUX7 1158 aa17.08■□□□□ 0.32
SCNN1A-215ENST00000540037 RIMS2Q9UQ26 1411 aa17.08■□□□□ 0.32
SCNN1A-215ENST00000540037 ARHGEF40Q8TER5 1519 aa17.07■□□□□ 0.32
SCNN1A-215ENST00000540037 DLG5Q8TDM6 1919 aa17.07■□□□□ 0.32
SCNN1A-215ENST00000540037 NEK4P51957 841 aa17.07■□□□□ 0.32
SCNN1A-215ENST00000540037 CWC22Q9HCG8 908 aaKnown RBP17.07■□□□□ 0.32
SCNN1A-215ENST00000540037 MLH3Q9UHC1 1453 aa17.07■□□□□ 0.32
SCNN1A-215ENST00000540037 UQCRHLA0A096LP55 91 aa17.06■□□□□ 0.32
SCNN1A-215ENST00000540037 UQCRHP07919 91 aa17.06■□□□□ 0.32
SCNN1A-215ENST00000540037 MCM10Q7L590 875 aa17.06■□□□□ 0.32
SCNN1A-215ENST00000540037 ZNF500O60304 480 aaPredicted RBP17.06■□□□□ 0.32
SCNN1A-215ENST00000540037 LRSAM1Q6UWE0 723 aa17.06■□□□□ 0.32
SCNN1A-215ENST00000540037 RGS12O14924 1447 aa17.06■□□□□ 0.32
SCNN1A-215ENST00000540037 TPRNQ4KMQ1 711 aa17.05■□□□□ 0.32
SCNN1A-215ENST00000540037 TMX3Q96JJ7 454 aa17.05■□□□□ 0.32
SCNN1A-215ENST00000540037 GDPD2Q9HCC8 539 aa17.05■□□□□ 0.32
SCNN1A-215ENST00000540037 MIS18AQ9NYP9 233 aa17.05■□□□□ 0.32
SCNN1A-215ENST00000540037 ZKSCAN5Q9Y2L8 839 aa17.05■□□□□ 0.32
SCNN1A-215ENST00000540037 RTL1A6NKG5 1358 aa17.05■□□□□ 0.32
SCNN1A-215ENST00000540037 CASC1Q6TDU7 716 aa17.04■□□□□ 0.32
SCNN1A-215ENST00000540037 PALD1Q9ULE6 856 aa17.04■□□□□ 0.32
SCNN1A-215ENST00000540037 HS1BP3Q53T59 392 aa17.04■□□□□ 0.32
SCNN1A-215ENST00000540037 JARID2Q92833 1246 aaPredicted RBP17.04■□□□□ 0.32
SCNN1A-215ENST00000540037 CLTCQ00610 1675 aaKnown RBP17.04■□□□□ 0.32
SCNN1A-215ENST00000540037 REREQ9P2R6 1566 aa17.03■□□□□ 0.32
SCNN1A-215ENST00000540037 F6X3S4 739 aa17.03■□□□□ 0.32
SCNN1A-215ENST00000540037 ERC2O15083 957 aa17.03■□□□□ 0.32
SCNN1A-215ENST00000540037 PLPPR3Q6T4P5 718 aa17.03■□□□□ 0.32
SCNN1A-215ENST00000540037 YEATS2Q9ULM3 1422 aa17.03■□□□□ 0.32
SCNN1A-215ENST00000540037 RPAP2Q8IXW5 612 aaPredicted RBP17.03■□□□□ 0.32
SCNN1A-215ENST00000540037 SLC52A1Q9NWF4 448 aa17.03■□□□□ 0.32
SCNN1A-215ENST00000540037 REC8O95072 547 aa17.02■□□□□ 0.32
SCNN1A-215ENST00000540037 SLC4A10Q6U841 1118 aa17.02■□□□□ 0.32
SCNN1A-215ENST00000540037 EXOC6BQ9Y2D4 811 aa17.02■□□□□ 0.32
SCNN1A-215ENST00000540037 PDE1AP54750 535 aa17.01■□□□□ 0.31
SCNN1A-215ENST00000540037 G2E3Q7L622 706 aa17.01■□□□□ 0.31
SCNN1A-215ENST00000540037 GADD45BO75293 160 aaPredicted RBP17■□□□□ 0.31
SCNN1A-215ENST00000540037 SLC4A2P04920 1241 aa17■□□□□ 0.31
SCNN1A-215ENST00000540037 LMOD3Q0VAK6 560 aa17■□□□□ 0.31
SCNN1A-215ENST00000540037 SULT6B1Q6IMI4 303 aa17■□□□□ 0.31
SCNN1A-215ENST00000540037 STAG3Q9UJ98 1225 aa17■□□□□ 0.31
SCNN1A-215ENST00000540037 ALKQ9UM73 1620 aa17■□□□□ 0.31
SCNN1A-215ENST00000540037 ZNF830Q96NB3 372 aaPredicted RBP16.99■□□□□ 0.31
SCNN1A-215ENST00000540037 UPF3BQ9BZI7 483 aaKnown RBP16.99■□□□□ 0.31
SCNN1A-215ENST00000540037 TMEM131LA2VDJ0 1609 aa16.99■□□□□ 0.31
SCNN1A-215ENST00000540037 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.99■□□□□ 0.31
SCNN1A-215ENST00000540037 KIF24Q5T7B8 1368 aa16.99■□□□□ 0.31
SCNN1A-215ENST00000540037 TERF1P54274 439 aa16.98■□□□□ 0.31
SCNN1A-215ENST00000540037 DTNBO60941 627 aa16.98■□□□□ 0.31
SCNN1A-215ENST00000540037 BRD1O95696 1058 aa16.98■□□□□ 0.31
SCNN1A-215ENST00000540037 NPM1P06748 294 aaKnown RBP eCLIP16.98■□□□□ 0.31
SCNN1A-215ENST00000540037 TSC1Q92574 1164 aa16.98■□□□□ 0.31
SCNN1A-215ENST00000540037 COG3Q96JB2 828 aa16.97■□□□□ 0.31
SCNN1A-215ENST00000540037 CCDC39Q9UFE4 941 aa16.97■□□□□ 0.31
SCNN1A-215ENST00000540037 CHL1O00533 1208 aa16.96■□□□□ 0.31
SCNN1A-215ENST00000540037 PTMAP06454 111 aaKnown RBP16.96■□□□□ 0.31
SCNN1A-215ENST00000540037 RILPL2Q969X0 211 aa16.96■□□□□ 0.31
SCNN1A-215ENST00000540037 ANO2Q9NQ90 1003 aa16.96■□□□□ 0.31
SCNN1A-215ENST00000540037 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.96■□□□□ 0.31
SCNN1A-215ENST00000540037 SOX12O15370 315 aa16.96■□□□□ 0.31
SCNN1A-215ENST00000540037 IL25Q9H293 177 aa16.96■□□□□ 0.31
SCNN1A-215ENST00000540037 CPS1P31327 1500 aa16.96■□□□□ 0.31
SCNN1A-215ENST00000540037 CDK12Q9NYV4 1490 aaPredicted RBP16.96■□□□□ 0.31
SCNN1A-215ENST00000540037 C17orf53Q8N3J3 647 aaPredicted RBP16.96■□□□□ 0.3
SCNN1A-215ENST00000540037 EIF4A2Q14240 407 aaKnown RBP16.95■□□□□ 0.3
SCNN1A-215ENST00000540037 UNC5CLQ8IV45 518 aa16.95■□□□□ 0.3
SCNN1A-215ENST00000540037 ESYT1Q9BSJ8 1104 aa16.95■□□□□ 0.3
SCNN1A-215ENST00000540037 FOXO3O43524 673 aa16.95■□□□□ 0.3
SCNN1A-215ENST00000540037 LARP6Q9BRS8 491 aaKnown RBP16.95■□□□□ 0.3
SCNN1A-215ENST00000540037 TSPY26PQ9H489 355 aa16.95■□□□□ 0.3
SCNN1A-215ENST00000540037 ATP7BP35670 1465 aa16.95■□□□□ 0.3
SCNN1A-215ENST00000540037 TRIM6-TRIM34B2RNG4 842 aa16.94■□□□□ 0.3
SCNN1A-215ENST00000540037 TXNDC2Q86VQ3 553 aa16.94■□□□□ 0.3
SCNN1A-215ENST00000540037 DIP2CQ9Y2E4 1556 aa16.94■□□□□ 0.3
SCNN1A-215ENST00000540037 MBD3O95983 291 aa16.94■□□□□ 0.3
SCNN1A-215ENST00000540037 CPSF1Q10570 1443 aaKnown RBP16.93■□□□□ 0.3
SCNN1A-215ENST00000540037 PNMA6EA0A0J9YXQ4 647 aa16.93■□□□□ 0.3
SCNN1A-215ENST00000540037 USP48Q86UV5 1035 aa16.93■□□□□ 0.3
SCNN1A-215ENST00000540037 EDC4Q6P2E9 1401 aaKnown RBP16.93■□□□□ 0.3
SCNN1A-215ENST00000540037 WASLO00401 505 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms