RNA–Protein interactions for RNA: ENST00000539573.5

NDUFA9-205, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 3

Gene NDUFA9, Length 500 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-205ENST00000539573 L3MBTL2Q969R5 705 aa12.6□□□□□ -0.39
NDUFA9-205ENST00000539573 COG3Q96JB2 828 aa12.6□□□□□ -0.39
NDUFA9-205ENST00000539573 NFAT5O94916 1531 aa12.6□□□□□ -0.39
NDUFA9-205ENST00000539573 COL23A1Q86Y22 540 aaPredicted RBP12.59□□□□□ -0.39
NDUFA9-205ENST00000539573 APLP1P51693 650 aa12.58□□□□□ -0.4
NDUFA9-205ENST00000539573 AK7Q96M32 723 aa12.58□□□□□ -0.4
NDUFA9-205ENST00000539573 PAPPAQ13219 1627 aa12.58□□□□□ -0.4
NDUFA9-205ENST00000539573 CGNL1Q0VF96 1302 aa12.58□□□□□ -0.4
NDUFA9-205ENST00000539573 KAT6BQ8WYB5 2073 aa12.57□□□□□ -0.4
NDUFA9-205ENST00000539573 SLC24A1O60721 1099 aa12.57□□□□□ -0.4
NDUFA9-205ENST00000539573 CACNB1Q02641 598 aaPredicted RBP12.57□□□□□ -0.4
NDUFA9-205ENST00000539573 SMARCC1Q92922 1105 aaPredicted RBP12.57□□□□□ -0.4
NDUFA9-205ENST00000539573 BTAF1O14981 1849 aa12.57□□□□□ -0.4
NDUFA9-205ENST00000539573 EDC4Q6P2E9 1401 aaKnown RBP12.56□□□□□ -0.4
NDUFA9-205ENST00000539573 TATP17735 454 aaPredicted RBP12.56□□□□□ -0.4
NDUFA9-205ENST00000539573 NEUROD1Q13562 356 aa12.56□□□□□ -0.4
NDUFA9-205ENST00000539573 SMG6Q86US8 1419 aaKnown RBP12.55□□□□□ -0.4
NDUFA9-205ENST00000539573 NSD3Q9BZ95 1437 aa12.55□□□□□ -0.4
NDUFA9-205ENST00000539573 C16orf71Q8IYS4 520 aaPredicted RBP12.55□□□□□ -0.4
NDUFA9-205ENST00000539573 CARD11Q9BXL7 1154 aa12.55□□□□□ -0.4
NDUFA9-205ENST00000539573 SLC12A5Q9H2X9 1139 aa12.55□□□□□ -0.4
NDUFA9-205ENST00000539573 RGPD5Q99666 1765 aa12.54□□□□□ -0.4
NDUFA9-205ENST00000539573 SBNO2Q9Y2G9 1366 aa12.54□□□□□ -0.4
NDUFA9-205ENST00000539573 HOXC9P31274 260 aa12.53□□□□□ -0.4
NDUFA9-205ENST00000539573 MPRIPQ6WCQ1 1025 aa12.53□□□□□ -0.4
NDUFA9-205ENST00000539573 PUS7Q96PZ0 661 aaKnown RBP12.53□□□□□ -0.4
NDUFA9-205ENST00000539573 IGSF1Q8N6C5 1336 aa12.53□□□□□ -0.4
NDUFA9-205ENST00000539573 SHANK3Q9BYB0 1731 aa12.53□□□□□ -0.4
NDUFA9-205ENST00000539573 PHF14O94880 888 aa12.52□□□□□ -0.41
NDUFA9-205ENST00000539573 PCDH11XQ9BZA7 1347 aa12.52□□□□□ -0.41
NDUFA9-205ENST00000539573 PCDH11YQ9BZA8 1340 aa12.52□□□□□ -0.41
NDUFA9-205ENST00000539573 TOMM70O94826 608 aa12.51□□□□□ -0.41
NDUFA9-205ENST00000539573 MAP3K19Q56UN5 1328 aa12.51□□□□□ -0.41
NDUFA9-205ENST00000539573 PALLDQ8WX93 1383 aa12.51□□□□□ -0.41
NDUFA9-205ENST00000539573 QSER1Q2KHR3 1735 aa12.51□□□□□ -0.41
NDUFA9-205ENST00000539573 WWC3Q9ULE0 1092 aa12.5□□□□□ -0.41
NDUFA9-205ENST00000539573 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.49□□□□□ -0.41
NDUFA9-205ENST00000539573 SSFA2P28290 1259 aa12.49□□□□□ -0.41
NDUFA9-205ENST00000539573 A0A1W2PP64 1363 aa12.48□□□□□ -0.41
NDUFA9-205ENST00000539573 ADCY9O60503 1353 aa12.48□□□□□ -0.41
NDUFA9-205ENST00000539573 NSD2O96028 1365 aa12.48□□□□□ -0.41
NDUFA9-205ENST00000539573 PPP4R3CPQ6ZMV5 832 aa12.48□□□□□ -0.41
NDUFA9-205ENST00000539573 RTL1A6NKG5 1358 aa12.47□□□□□ -0.41
NDUFA9-205ENST00000539573 KIF3CO14782 793 aa12.47□□□□□ -0.41
NDUFA9-205ENST00000539573 NBPF6Q5VWK0 638 aa12.47□□□□□ -0.41
NDUFA9-205ENST00000539573 ARHGAP27Q6ZUM4 889 aa12.47□□□□□ -0.41
NDUFA9-205ENST00000539573 NBPF4Q96M43 638 aa12.47□□□□□ -0.41
NDUFA9-205ENST00000539573 SIN3AQ96ST3 1273 aa12.47□□□□□ -0.41
NDUFA9-205ENST00000539573 SPG7Q9UQ90 795 aa12.47□□□□□ -0.41
NDUFA9-205ENST00000539573 BCS1LQ9Y276 419 aa12.47□□□□□ -0.41
NDUFA9-205ENST00000539573 MON2Q7Z3U7 1717 aa12.46□□□□□ -0.41
NDUFA9-205ENST00000539573 FAM208AQ9UK61 1670 aaKnown RBP12.46□□□□□ -0.41
NDUFA9-205ENST00000539573 TGFB2P61812 414 aa12.46□□□□□ -0.41
NDUFA9-205ENST00000539573 USHBP1Q8N6Y0 703 aa12.46□□□□□ -0.41
NDUFA9-205ENST00000539573 LTN1O94822 1766 aa12.46□□□□□ -0.42
NDUFA9-205ENST00000539573 GNPATO15228 680 aa12.45□□□□□ -0.42
NDUFA9-205ENST00000539573 NLGN1Q8N2Q7 840 aa12.45□□□□□ -0.42
NDUFA9-205ENST00000539573 TMOD3Q9NYL9 352 aa12.45□□□□□ -0.42
NDUFA9-205ENST00000539573 KDM2BQ8NHM5 1336 aa12.44□□□□□ -0.42
NDUFA9-205ENST00000539573 LOC102724428A0A0B4J2F2 783 aa12.44□□□□□ -0.42
NDUFA9-205ENST00000539573 MMP10P09238 476 aa12.44□□□□□ -0.42
NDUFA9-205ENST00000539573 SIK1P57059 783 aa12.44□□□□□ -0.42
NDUFA9-205ENST00000539573 RRS1Q15050 365 aaKnown RBP12.44□□□□□ -0.42
NDUFA9-205ENST00000539573 CCDC87Q9NVE4 849 aa12.44□□□□□ -0.42
NDUFA9-205ENST00000539573 COL24A1Q17RW2 1714 aa12.44□□□□□ -0.42
NDUFA9-205ENST00000539573 CD163L1Q9NR16 1453 aa12.44□□□□□ -0.42
NDUFA9-205ENST00000539573 MEGF6O75095 1541 aa12.43□□□□□ -0.42
NDUFA9-205ENST00000539573 DOT1LQ8TEK3 1739 aa12.43□□□□□ -0.42
NDUFA9-205ENST00000539573 FCHSD2O94868 740 aa12.43□□□□□ -0.42
NDUFA9-205ENST00000539573 ATP6V1AP38606 617 aa12.43□□□□□ -0.42
NDUFA9-205ENST00000539573 TMF1P82094 1093 aa12.43□□□□□ -0.42
NDUFA9-205ENST00000539573 TRAPPC3LQ5T215 181 aa12.43□□□□□ -0.42
NDUFA9-205ENST00000539573 RBM46Q8TBY0 533 aaKnown RBP12.43□□□□□ -0.42
NDUFA9-205ENST00000539573 RTCBQ9Y3I0 505 aaKnown RBP12.43□□□□□ -0.42
NDUFA9-205ENST00000539573 USP54Q70EL1 1684 aa12.42□□□□□ -0.42
NDUFA9-205ENST00000539573 CAPN15O75808 1086 aa12.42□□□□□ -0.42
NDUFA9-205ENST00000539573 FSTL1Q12841 308 aa12.42□□□□□ -0.42
NDUFA9-205ENST00000539573 PARP3Q9Y6F1 533 aa12.42□□□□□ -0.42
NDUFA9-205ENST00000539573 LY75O60449 1722 aa12.42□□□□□ -0.42
NDUFA9-205ENST00000539573 FBLN1P23142 703 aa12.41□□□□□ -0.42
NDUFA9-205ENST00000539573 CDCA8Q53HL2 280 aa12.41□□□□□ -0.42
NDUFA9-205ENST00000539573 TNS4Q8IZW8 715 aa12.41□□□□□ -0.42
NDUFA9-205ENST00000539573 PIGBQ92521 554 aa12.41□□□□□ -0.42
NDUFA9-205ENST00000539573 GGNBP2Q9H3C7 697 aa12.41□□□□□ -0.42
NDUFA9-205ENST00000539573 INSRP06213 1382 aa12.41□□□□□ -0.42
NDUFA9-205ENST00000539573 TONSLQ96HA7 1378 aa12.41□□□□□ -0.42
NDUFA9-205ENST00000539573 UTRNP46939 3433 aa12.4□□□□□ -0.42
NDUFA9-205ENST00000539573 A0A0G2JLW4 131 aa12.4□□□□□ -0.42
NDUFA9-205ENST00000539573 PPM1GO15355 546 aaPredicted RBP12.4□□□□□ -0.42
NDUFA9-205ENST00000539573 RFC4P35249 363 aa12.4□□□□□ -0.42
NDUFA9-205ENST00000539573 HSP90AB2PQ58FF8 381 aa12.4□□□□□ -0.42
NDUFA9-205ENST00000539573 DNAJC5GQ8N7S2 189 aa12.4□□□□□ -0.42
NDUFA9-205ENST00000539573 KLRG1Q96E93 195 aa12.4□□□□□ -0.42
NDUFA9-205ENST00000539573 FLT4P35916 1363 aa12.4□□□□□ -0.42
NDUFA9-205ENST00000539573 KIF24Q5T7B8 1368 aa12.4□□□□□ -0.42
NDUFA9-205ENST00000539573 PLEKHG2Q9H7P9 1386 aa12.4□□□□□ -0.42
NDUFA9-205ENST00000539573 CYP27B1O15528 508 aa12.39□□□□□ -0.43
NDUFA9-205ENST00000539573 NMRK2Q9NPI5 230 aa12.39□□□□□ -0.43
NDUFA9-205ENST00000539573 FYB1O15117 783 aa12.38□□□□□ -0.43
NDUFA9-205ENST00000539573 C9orf131Q5VYM1 1079 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms