RNA–Protein interactions for RNA: ENST00000539568.2

AC007406.4-201, humanhuman

TSL 1 (best) BASIC

Gene AC007406.4, Length 765 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007406.4-201ENST00000539568 MEGF6O75095 1541 aa21.45■■□□□ 1.02
AC007406.4-201ENST00000539568 PARP4Q9UKK3 1724 aaKnown RBP21.45■■□□□ 1.02
AC007406.4-201ENST00000539568 DISP2A7MBM2 1401 aa21.45■■□□□ 1.02
AC007406.4-201ENST00000539568 LRRC37A3O60309 1634 aa21.44■■□□□ 1.02
AC007406.4-201ENST00000539568 ONECUT3O60422 494 aaPredicted RBP21.43■■□□□ 1.02
AC007406.4-201ENST00000539568 WDR43Q15061 677 aaKnown RBP eCLIP21.43■■□□□ 1.02
AC007406.4-201ENST00000539568 NCAPD2Q15021 1401 aa21.43■■□□□ 1.02
AC007406.4-201ENST00000539568 CDCA7Q9BWT1 371 aaPredicted RBP21.42■■□□□ 1.02
AC007406.4-201ENST00000539568 EXOC5O00471 708 aa21.41■■□□□ 1.02
AC007406.4-201ENST00000539568 DDB1Q16531 1140 aa21.41■■□□□ 1.02
AC007406.4-201ENST00000539568 PDE3BQ13370 1112 aa21.39■■□□□ 1.01
AC007406.4-201ENST00000539568 OVOS2A0A0G2JMS6 1433 aa21.38■■□□□ 1.01
AC007406.4-201ENST00000539568 KDRP35968 1356 aa21.38■■□□□ 1.01
AC007406.4-201ENST00000539568 PSDA5PKW4 1024 aaPredicted RBP21.38■■□□□ 1.01
AC007406.4-201ENST00000539568 PRKAR2BP31323 418 aa21.38■■□□□ 1.01
AC007406.4-201ENST00000539568 FAM182BQ5T319 152 aa21.38■■□□□ 1.01
AC007406.4-201ENST00000539568 ZCRB1Q8TBF4 217 aaKnown RBP21.38■■□□□ 1.01
AC007406.4-201ENST00000539568 DDX54Q8TDD1 881 aaKnown RBP21.38■■□□□ 1.01
AC007406.4-201ENST00000539568 RSPH6AQ9H0K4 717 aa21.38■■□□□ 1.01
AC007406.4-201ENST00000539568 KRT27Q7Z3Y8 459 aa21.37■■□□□ 1.01
AC007406.4-201ENST00000539568 SHANK3Q9BYB0 1731 aa21.37■■□□□ 1.01
AC007406.4-201ENST00000539568 TNS2Q63HR2 1409 aa21.37■■□□□ 1.01
AC007406.4-201ENST00000539568 PKD1L3Q7Z443 1732 aa21.36■■□□□ 1.01
AC007406.4-201ENST00000539568 ADAMTS8Q9UP79 889 aa21.36■■□□□ 1.01
AC007406.4-201ENST00000539568 PLEKHO1Q53GL0 409 aaPredicted RBP21.35■■□□□ 1.01
AC007406.4-201ENST00000539568 CCDC146Q8IYE0 955 aa21.35■■□□□ 1.01
AC007406.4-201ENST00000539568 SPG7Q9UQ90 795 aa21.35■■□□□ 1.01
AC007406.4-201ENST00000539568 CCER2I3L3R5 266 aa21.34■■□□□ 1.01
AC007406.4-201ENST00000539568 FCHSD2O94868 740 aa21.34■■□□□ 1.01
AC007406.4-201ENST00000539568 SF3B2Q13435 895 aaKnown RBP21.34■■□□□ 1.01
AC007406.4-201ENST00000539568 FAM9BQ8IZU0 186 aa21.34■■□□□ 1.01
AC007406.4-201ENST00000539568 MARCH10Q8NA82 808 aaPredicted RBP21.33■■□□□ 1.01
AC007406.4-201ENST00000539568 PNISRQ8TF01 805 aaKnown RBP21.33■■□□□ 1.01
AC007406.4-201ENST00000539568 PHACTR3Q96KR7 559 aa21.33■■□□□ 1.01
AC007406.4-201ENST00000539568 ZNF530Q6P9A1 599 aaPredicted RBP21.32■■□□□ 1
AC007406.4-201ENST00000539568 NEFMP07197 916 aa21.31■■□□□ 1
AC007406.4-201ENST00000539568 MTHFSDQ2M296 383 aaKnown RBP21.31■■□□□ 1
AC007406.4-201ENST00000539568 AMOTQ4VCS5 1084 aa21.31■■□□□ 1
AC007406.4-201ENST00000539568 PCDH11XQ9BZA7 1347 aa21.3■■□□□ 1
AC007406.4-201ENST00000539568 PCDH11YQ9BZA8 1340 aa21.3■■□□□ 1
AC007406.4-201ENST00000539568 PNNQ9H307 717 aaKnown RBP21.3■■□□□ 1
AC007406.4-201ENST00000539568 CYP27B1O15528 508 aa21.29■■□□□ 1
AC007406.4-201ENST00000539568 PLEKHF1Q96S99 279 aa21.29■■□□□ 1
AC007406.4-201ENST00000539568 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.29■■□□□ 1
AC007406.4-201ENST00000539568 MAPK8IP3Q9UPT6 1336 aa21.29■■□□□ 1
AC007406.4-201ENST00000539568 SENP3-EIF4A1A0A087X0R7 540 aa21.28■■□□□ 1
AC007406.4-201ENST00000539568 PHKG2P15735 406 aa21.27■■□□□ 1
AC007406.4-201ENST00000539568 C1orf141Q5JVX7 400 aa21.27■■□□□ 1
AC007406.4-201ENST00000539568 IFNL2Q8IZJ0 200 aa21.27■■□□□ 1
AC007406.4-201ENST00000539568 RUNDC1Q96C34 613 aa21.26■□□□□ 0.99
AC007406.4-201ENST00000539568 ACSBG1Q96GR2 724 aa21.26■□□□□ 0.99
AC007406.4-201ENST00000539568 GAS2L2Q8NHY3 880 aa21.25■□□□□ 0.99
AC007406.4-201ENST00000539568 PLEKHG2Q9H7P9 1386 aa21.24■□□□□ 0.99
AC007406.4-201ENST00000539568 RRP7AQ9Y3A4 280 aaKnown RBP21.24■□□□□ 0.99
AC007406.4-201ENST00000539568 DOT1LQ8TEK3 1739 aa21.24■□□□□ 0.99
AC007406.4-201ENST00000539568 MPRIPQ6WCQ1 1025 aa21.23■□□□□ 0.99
AC007406.4-201ENST00000539568 DLG5Q8TDM6 1919 aa21.23■□□□□ 0.99
AC007406.4-201ENST00000539568 VIRMAQ69YN4 1812 aaKnown RBP21.22■□□□□ 0.99
AC007406.4-201ENST00000539568 KAT6BQ8WYB5 2073 aa21.22■□□□□ 0.99
AC007406.4-201ENST00000539568 YY1P25490 414 aa21.22■□□□□ 0.99
AC007406.4-201ENST00000539568 NEUROD2Q15784 382 aa21.22■□□□□ 0.99
AC007406.4-201ENST00000539568 AKAP4Q5JQC9 854 aa21.22■□□□□ 0.99
AC007406.4-201ENST00000539568 FAM196AQ6ZSG2 479 aa21.22■□□□□ 0.99
AC007406.4-201ENST00000539568 SBF2Q86WG5 1849 aa21.21■□□□□ 0.99
AC007406.4-201ENST00000539568 NFE2L2Q16236 605 aa21.21■□□□□ 0.99
AC007406.4-201ENST00000539568 SYTL4Q96C24 671 aaPredicted RBP21.21■□□□□ 0.99
AC007406.4-201ENST00000539568 TOGARAM1Q9Y4F4 1720 aa21.21■□□□□ 0.99
AC007406.4-201ENST00000539568 BAG6P46379 1132 aa21.2■□□□□ 0.98
AC007406.4-201ENST00000539568 MAP3K5Q99683 1374 aa21.2■□□□□ 0.98
AC007406.4-201ENST00000539568 GNAT3A8MTJ3 354 aa21.19■□□□□ 0.98
AC007406.4-201ENST00000539568 APAF1O14727 1248 aa21.19■□□□□ 0.98
AC007406.4-201ENST00000539568 TRIM37O94972 964 aa21.19■□□□□ 0.98
AC007406.4-201ENST00000539568 TMPOP42166 694 aaKnown RBP21.19■□□□□ 0.98
AC007406.4-201ENST00000539568 LGR6Q9HBX8 967 aa21.19■□□□□ 0.98
AC007406.4-201ENST00000539568 KCNQ2O43526 872 aa21.18■□□□□ 0.98
AC007406.4-201ENST00000539568 HSP90AB1P08238 724 aaKnown RBP21.18■□□□□ 0.98
AC007406.4-201ENST00000539568 RIPK4P57078 832 aa21.18■□□□□ 0.98
AC007406.4-201ENST00000539568 R3HDM1Q15032 1099 aaKnown RBP21.18■□□□□ 0.98
AC007406.4-201ENST00000539568 NKX1-1Q15270 411 aaPredicted RBP21.18■□□□□ 0.98
AC007406.4-201ENST00000539568 KDM6AO15550 1401 aaPredicted RBP21.18■□□□□ 0.98
AC007406.4-201ENST00000539568 SCN11AQ9UI33 1791 aa21.18■□□□□ 0.98
AC007406.4-201ENST00000539568 ITGB4P16144 1822 aa21.18■□□□□ 0.98
AC007406.4-201ENST00000539568 PRIM1P49642 420 aaKnown RBP21.17■□□□□ 0.98
AC007406.4-201ENST00000539568 DCTN1Q14203 1278 aa21.17■□□□□ 0.98
AC007406.4-201ENST00000539568 PTF1AQ7RTS3 328 aa21.17■□□□□ 0.98
AC007406.4-201ENST00000539568 DCAF5Q96JK2 942 aa21.17■□□□□ 0.98
AC007406.4-201ENST00000539568 NHSQ6T4R5 1651 aa21.16■□□□□ 0.98
AC007406.4-201ENST00000539568 RNMTO43148 476 aaKnown RBP21.16■□□□□ 0.98
AC007406.4-201ENST00000539568 MCM10Q7L590 875 aa21.16■□□□□ 0.98
AC007406.4-201ENST00000539568 RTF1Q92541 710 aaKnown RBP21.16■□□□□ 0.98
AC007406.4-201ENST00000539568 SALL2Q9Y467 1007 aaPredicted RBP21.16■□□□□ 0.98
AC007406.4-201ENST00000539568 EN1Q05925 392 aaPredicted RBP21.15■□□□□ 0.98
AC007406.4-201ENST00000539568 IL17REQ8NFR9 667 aa21.14■□□□□ 0.97
AC007406.4-201ENST00000539568 BCL9O00512 1426 aa21.13■□□□□ 0.97
AC007406.4-201ENST00000539568 CABP4P57796 275 aa21.13■□□□□ 0.97
AC007406.4-201ENST00000539568 THUMPD2Q9BTF0 503 aaKnown RBP21.12■□□□□ 0.97
AC007406.4-201ENST00000539568 TMOD3Q9NYL9 352 aa21.12■□□□□ 0.97
AC007406.4-201ENST00000539568 BTAF1O14981 1849 aa21.12■□□□□ 0.97
AC007406.4-201ENST00000539568 TNS1Q9HBL0 1735 aaKnown RBP21.12■□□□□ 0.97
AC007406.4-201ENST00000539568 BCL11BQ9C0K0 894 aaPredicted RBP21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms