RNA–Protein interactions for RNA: ENST00000539568.2

AC007406.4-201, humanhuman

TSL 1 (best) BASIC

Gene AC007406.4, Length 765 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007406.4-201ENST00000539568 NISCHQ9Y2I1 1504 aa38.16■■■■□ 3.7
AC007406.4-201ENST00000539568 CCDC180Q9P1Z9 1646 aa33.73■■■□□ 2.99
AC007406.4-201ENST00000539568 ABCC9O60706 1549 aa33.13■■■□□ 2.89
AC007406.4-201ENST00000539568 DNAJC5BQ9UF47 199 aa31.98■■■□□ 2.71
AC007406.4-201ENST00000539568 DCAF8L2P0C7V8 631 aa31.9■■■□□ 2.7
AC007406.4-201ENST00000539568 ZCCHC6Q5VYS8 1495 aaKnown RBP31.85■■■□□ 2.69
AC007406.4-201ENST00000539568 NACADO15069 1562 aa31.6■■■□□ 2.65
AC007406.4-201ENST00000539568 RB1CC1Q8TDY2 1594 aa31.58■■■□□ 2.65
AC007406.4-201ENST00000539568 DCAF1Q9Y4B6 1507 aa31.5■■■□□ 2.63
AC007406.4-201ENST00000539568 MYO15BQ96JP2 1530 aa31.44■■■□□ 2.62
AC007406.4-201ENST00000539568 UNC13AQ9UPW8 1703 aa30.96■■■□□ 2.55
AC007406.4-201ENST00000539568 SCRIBQ14160 1630 aa30.94■■■□□ 2.54
AC007406.4-201ENST00000539568 PABPN1Q86U42 306 aaKnown RBP eCLIP30.74■■■□□ 2.51
AC007406.4-201ENST00000539568 BICRAQ9NZM4 1560 aa30.62■■■□□ 2.49
AC007406.4-201ENST00000539568 SHROOM4Q9ULL8 1493 aa30.57■■■□□ 2.48
AC007406.4-201ENST00000539568 DNAJC5Q9H3Z4 198 aa29.97■■■□□ 2.39
AC007406.4-201ENST00000539568 CECR2Q9BXF3 1484 aa29.92■■■□□ 2.38
AC007406.4-201ENST00000539568 CC2D2AQ9P2K1 1620 aa29.85■■■□□ 2.37
AC007406.4-201ENST00000539568 EIF4G1Q04637 1599 aaKnown RBP29.78■■■□□ 2.36
AC007406.4-201ENST00000539568 SMARCA4P51532 1647 aa29.56■■■□□ 2.32
AC007406.4-201ENST00000539568 BAZ1AQ9NRL2 1556 aaPredicted RBP29.54■■■□□ 2.32
AC007406.4-201ENST00000539568 MROH2BQ7Z745 1585 aa29.47■■■□□ 2.31
AC007406.4-201ENST00000539568 ATAD2BQ9ULI0 1458 aa29.26■■■□□ 2.27
AC007406.4-201ENST00000539568 SMARCA2P51531 1590 aa29.23■■■□□ 2.27
AC007406.4-201ENST00000539568 RSF1Q96T23 1441 aaPredicted RBP29.23■■■□□ 2.27
AC007406.4-201ENST00000539568 WIZO95785 1651 aa29.22■■■□□ 2.27
AC007406.4-201ENST00000539568 PEG3Q9GZU2 1588 aa29.17■■■□□ 2.26
AC007406.4-201ENST00000539568 NCAPD3P42695 1498 aa29.13■■■□□ 2.25
AC007406.4-201ENST00000539568 BAZ1BQ9UIG0 1483 aaKnown RBP29.08■■■□□ 2.25
AC007406.4-201ENST00000539568 HMGXB3Q12766 1538 aa29.04■■■□□ 2.24
AC007406.4-201ENST00000539568 SUPT5HO00267 1087 aaKnown RBP28.94■■■□□ 2.22
AC007406.4-201ENST00000539568 CUX2O14529 1486 aa28.87■■■□□ 2.21
AC007406.4-201ENST00000539568 TOP2AP11388 1531 aaKnown RBP28.84■■■□□ 2.21
AC007406.4-201ENST00000539568 ERCC6Q03468 1493 aa28.63■■■□□ 2.17
AC007406.4-201ENST00000539568 CCDC88BA6NC98 1476 aa28.53■■■□□ 2.16
AC007406.4-201ENST00000539568 NESP48681 1621 aa28.45■■■□□ 2.14
AC007406.4-201ENST00000539568 CADPSQ9ULU8 1353 aa28.35■■■□□ 2.13
AC007406.4-201ENST00000539568 LAMC3Q9Y6N6 1575 aa28.34■■■□□ 2.13
AC007406.4-201ENST00000539568 TRIM41Q8WV44 630 aa28.3■■■□□ 2.12
AC007406.4-201ENST00000539568 CFTRP13569 1480 aa28.24■■■□□ 2.11
AC007406.4-201ENST00000539568 PRDM2Q13029 1718 aa28.15■■■□□ 2.1
AC007406.4-201ENST00000539568 KIF21AQ7Z4S6 1674 aa28.14■■■□□ 2.1
AC007406.4-201ENST00000539568 PDS5BQ9NTI5 1447 aa28.14■■■□□ 2.1
AC007406.4-201ENST00000539568 THOC2Q8NI27 1593 aaKnown RBP28.07■■■□□ 2.08
AC007406.4-201ENST00000539568 FANCD2Q9BXW9 1451 aa28.06■■■□□ 2.08
AC007406.4-201ENST00000539568 CEP164Q9UPV0 1460 aa27.98■■■□□ 2.07
AC007406.4-201ENST00000539568 MRC2Q9UBG0 1479 aa27.85■■■□□ 2.05
AC007406.4-201ENST00000539568 URB2Q14146 1524 aaKnown RBP27.77■■■□□ 2.04
AC007406.4-201ENST00000539568 WDR62O43379 1518 aa27.72■■■□□ 2.03
AC007406.4-201ENST00000539568 ABCC8Q09428 1581 aa27.69■■■□□ 2.02
AC007406.4-201ENST00000539568 TOPBP1Q92547 1522 aa27.66■■■□□ 2.02
AC007406.4-201ENST00000539568 DNMBPQ6XZF7 1577 aa27.65■■■□□ 2.02
AC007406.4-201ENST00000539568 CUX1P39880 1505 aa27.61■■■□□ 2.01
AC007406.4-201ENST00000539568 WRNQ14191 1432 aaPredicted RBP eCLIP27.57■■■□□ 2
AC007406.4-201ENST00000539568 SYNJ1O43426 1573 aa27.52■■■□□ 2
AC007406.4-201ENST00000539568 FGD5Q6ZNL6 1462 aa27.46■■□□□ 1.99
AC007406.4-201ENST00000539568 TOP2BQ02880 1626 aa27.46■■□□□ 1.99
AC007406.4-201ENST00000539568 BIVM-ERCC5R4GMW8 1640 aa27.46■■□□□ 1.99
AC007406.4-201ENST00000539568 POLA1P09884 1462 aaPredicted RBP27.44■■□□□ 1.98
AC007406.4-201ENST00000539568 OSCARQ8IYS5 282 aa27.42■■□□□ 1.98
AC007406.4-201ENST00000539568 RAD54L2Q9Y4B4 1467 aa27.38■■□□□ 1.97
AC007406.4-201ENST00000539568 SOGA1O94964 1423 aa27.35■■□□□ 1.97
AC007406.4-201ENST00000539568 IFT140Q96RY7 1462 aa27.35■■□□□ 1.97
AC007406.4-201ENST00000539568 TARBP1Q13395 1621 aaKnown RBP27.32■■□□□ 1.96
AC007406.4-201ENST00000539568 ZNF608Q9ULD9 1512 aaPredicted RBP27.26■■□□□ 1.95
AC007406.4-201ENST00000539568 WDR97A6NE52 1622 aa27.21■■□□□ 1.95
AC007406.4-201ENST00000539568 RIMBP3CA6NJZ7 1639 aa27.19■■□□□ 1.94
AC007406.4-201ENST00000539568 RIMBP3BA6NNM3 1639 aa27.19■■□□□ 1.94
AC007406.4-201ENST00000539568 RIMBP3Q9UFD9 1639 aa27.19■■□□□ 1.94
AC007406.4-201ENST00000539568 CHIC1Q5VXU3 224 aa27.18■■□□□ 1.94
AC007406.4-201ENST00000539568 TDRD9Q8NDG6 1382 aaKnown RBP27.18■■□□□ 1.94
AC007406.4-201ENST00000539568 AQRO60306 1485 aaKnown RBP eCLIP27.16■■□□□ 1.94
AC007406.4-201ENST00000539568 EIF4G3O43432 1585 aaKnown RBP27.16■■□□□ 1.94
AC007406.4-201ENST00000539568 ABCA10Q8WWZ4 1543 aa27.16■■□□□ 1.94
AC007406.4-201ENST00000539568 ABCA5Q8WWZ7 1642 aa27.05■■□□□ 1.92
AC007406.4-201ENST00000539568 GAPVD1Q14C86 1478 aa27.04■■□□□ 1.92
AC007406.4-201ENST00000539568 PBRM1Q86U86 1689 aa27.01■■□□□ 1.92
AC007406.4-201ENST00000539568 ARHGEF11O15085 1522 aa27■■□□□ 1.91
AC007406.4-201ENST00000539568 GRIN2BQ13224 1484 aa26.96■■□□□ 1.91
AC007406.4-201ENST00000539568 KIF27Q86VH2 1401 aa26.94■■□□□ 1.9
AC007406.4-201ENST00000539568 RUSC2Q8N2Y8 1516 aa26.92■■□□□ 1.9
AC007406.4-201ENST00000539568 SNAPC4Q5SXM2 1469 aa26.91■■□□□ 1.9
AC007406.4-201ENST00000539568 CYB5RLQ6IPT4 315 aa26.89■■□□□ 1.9
AC007406.4-201ENST00000539568 TRHP20396 242 aaPredicted RBP26.87■■□□□ 1.89
AC007406.4-201ENST00000539568 ERICH3Q5RHP9 1530 aa26.84■■□□□ 1.89
AC007406.4-201ENST00000539568 FBLN2P98095 1184 aa26.83■■□□□ 1.89
AC007406.4-201ENST00000539568 MAGI1Q96QZ7 1491 aaPredicted RBP26.81■■□□□ 1.88
AC007406.4-201ENST00000539568 FAM9AQ8IZU1 332 aaPredicted RBP26.8■■□□□ 1.88
AC007406.4-201ENST00000539568 CHD1O14646 1710 aa26.79■■□□□ 1.88
AC007406.4-201ENST00000539568 IGF1RP08069 1367 aa26.78■■□□□ 1.88
AC007406.4-201ENST00000539568 ADAMTS12P58397 1594 aa26.77■■□□□ 1.88
AC007406.4-201ENST00000539568 AEBP2Q6ZN18 517 aaPredicted RBP26.75■■□□□ 1.87
AC007406.4-201ENST00000539568 CHMP7Q8WUX9 453 aaPredicted RBP26.75■■□□□ 1.87
AC007406.4-201ENST00000539568 SYNJ2O15056 1496 aa26.73■■□□□ 1.87
AC007406.4-201ENST00000539568 CUL7Q14999 1698 aa26.71■■□□□ 1.87
AC007406.4-201ENST00000539568 FHAD1B1AJZ9 1412 aa26.71■■□□□ 1.87
AC007406.4-201ENST00000539568 ARAP1Q96P48 1450 aa26.69■■□□□ 1.86
AC007406.4-201ENST00000539568 EEA1Q15075 1411 aa26.65■■□□□ 1.86
AC007406.4-201ENST00000539568 CARMIL1Q5VZK9 1371 aa26.65■■□□□ 1.86
AC007406.4-201ENST00000539568 CSRNP3Q8WYN3 585 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms