RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 ANKRD24Q8TF21 1146 aa21.92■■□□□ 1.1
PCDHB17P-201ENST00000539533 CANXP27824 592 aaKnown RBP21.92■■□□□ 1.1
PCDHB17P-201ENST00000539533 GAS2L2Q8NHY3 880 aa21.92■■□□□ 1.1
PCDHB17P-201ENST00000539533 SOS2Q07890 1332 aaPredicted RBP21.92■■□□□ 1.1
PCDHB17P-201ENST00000539533 ANO8Q9HCE9 1232 aaPredicted RBP21.91■■□□□ 1.1
PCDHB17P-201ENST00000539533 SSH1Q8WYL5 1049 aa21.9■■□□□ 1.1
PCDHB17P-201ENST00000539533 RGPD5Q99666 1765 aa21.9■■□□□ 1.1
PCDHB17P-201ENST00000539533 PDE4AP27815 886 aa21.89■■□□□ 1.1
PCDHB17P-201ENST00000539533 TSPYL6Q8N831 410 aa21.89■■□□□ 1.1
PCDHB17P-201ENST00000539533 MS4A1P11836 297 aa21.89■■□□□ 1.09
PCDHB17P-201ENST00000539533 RTF1Q92541 710 aaKnown RBP21.89■■□□□ 1.09
PCDHB17P-201ENST00000539533 PANK1Q8TE04 598 aa21.88■■□□□ 1.09
PCDHB17P-201ENST00000539533 SMC4Q9NTJ3 1288 aa21.88■■□□□ 1.09
PCDHB17P-201ENST00000539533 TNNQ9UQP3 1299 aa21.88■■□□□ 1.09
PCDHB17P-201ENST00000539533 ELL2O00472 640 aaPredicted RBP21.88■■□□□ 1.09
PCDHB17P-201ENST00000539533 PDE3AQ14432 1141 aa21.88■■□□□ 1.09
PCDHB17P-201ENST00000539533 NPM2Q86SE8 214 aaKnown RBP21.88■■□□□ 1.09
PCDHB17P-201ENST00000539533 CHRNA2Q15822 529 aa21.87■■□□□ 1.09
PCDHB17P-201ENST00000539533 BACH2Q9BYV9 841 aa21.87■■□□□ 1.09
PCDHB17P-201ENST00000539533 CRB1P82279 1406 aa21.86■■□□□ 1.09
PCDHB17P-201ENST00000539533 CRYBG1Q9Y4K1 1723 aa21.86■■□□□ 1.09
PCDHB17P-201ENST00000539533 ERBB3P21860 1342 aa21.86■■□□□ 1.09
PCDHB17P-201ENST00000539533 GNAT3A8MTJ3 354 aa21.86■■□□□ 1.09
PCDHB17P-201ENST00000539533 CHL1O00533 1208 aa21.86■■□□□ 1.09
PCDHB17P-201ENST00000539533 VAMP4O75379 141 aa21.86■■□□□ 1.09
PCDHB17P-201ENST00000539533 C8orf58Q8NAV2 365 aa21.86■■□□□ 1.09
PCDHB17P-201ENST00000539533 KIAA0232Q92628 1395 aa21.85■■□□□ 1.09
PCDHB17P-201ENST00000539533 MIS18AQ9NYP9 233 aa21.84■■□□□ 1.09
PCDHB17P-201ENST00000539533 RLBP1P12271 317 aa21.84■■□□□ 1.09
PCDHB17P-201ENST00000539533 COG6Q9Y2V7 657 aa21.84■■□□□ 1.09
PCDHB17P-201ENST00000539533 HTATSF1O43719 755 aaKnown RBP21.83■■□□□ 1.09
PCDHB17P-201ENST00000539533 CLUAP1Q96AJ1 413 aa21.83■■□□□ 1.09
PCDHB17P-201ENST00000539533 COL18A1P39060 1754 aa21.83■■□□□ 1.09
PCDHB17P-201ENST00000539533 TWISTNBQ3B726 338 aaPredicted RBP21.83■■□□□ 1.08
PCDHB17P-201ENST00000539533 IL17REQ8NFR9 667 aa21.83■■□□□ 1.08
PCDHB17P-201ENST00000539533 NCAPD2Q15021 1401 aa21.83■■□□□ 1.08
PCDHB17P-201ENST00000539533 MAP3K5Q99683 1374 aa21.82■■□□□ 1.08
PCDHB17P-201ENST00000539533 KRT24Q2M2I5 525 aa21.82■■□□□ 1.08
PCDHB17P-201ENST00000539533 ALDH1L2Q3SY69 923 aa21.82■■□□□ 1.08
PCDHB17P-201ENST00000539533 LTBP4Q8N2S1 1624 aa21.81■■□□□ 1.08
PCDHB17P-201ENST00000539533 ZKSCAN2Q63HK3 967 aa21.81■■□□□ 1.08
PCDHB17P-201ENST00000539533 NOB1Q9ULX3 412 aaKnown RBP21.81■■□□□ 1.08
PCDHB17P-201ENST00000539533 NHSL1Q5SYE7 1610 aa21.81■■□□□ 1.08
PCDHB17P-201ENST00000539533 CPDO75976 1380 aa21.8■■□□□ 1.08
PCDHB17P-201ENST00000539533 ZNF428Q96B54 188 aa21.8■■□□□ 1.08
PCDHB17P-201ENST00000539533 NLRP2Q9NX02 1062 aa21.8■■□□□ 1.08
PCDHB17P-201ENST00000539533 CAMTA1Q9Y6Y1 1673 aa21.78■■□□□ 1.08
PCDHB17P-201ENST00000539533 CSB-PGBD3P0DP91 1061 aa21.78■■□□□ 1.08
PCDHB17P-201ENST00000539533 TRIM27P14373 513 aa21.78■■□□□ 1.08
PCDHB17P-201ENST00000539533 HAP1P54257 671 aaPredicted RBP21.78■■□□□ 1.08
PCDHB17P-201ENST00000539533 PLEKHO1Q53GL0 409 aaPredicted RBP21.78■■□□□ 1.08
PCDHB17P-201ENST00000539533 TSPYL4Q9UJ04 414 aa21.78■■□□□ 1.08
PCDHB17P-201ENST00000539533 ZNF530Q6P9A1 599 aaPredicted RBP21.77■■□□□ 1.08
PCDHB17P-201ENST00000539533 ATF7IPQ6VMQ6 1270 aa21.76■■□□□ 1.07
PCDHB17P-201ENST00000539533 DZIP1LQ8IYY4 767 aaKnown RBP21.76■■□□□ 1.07
PCDHB17P-201ENST00000539533 IL27Q8NEV9 243 aa21.76■■□□□ 1.07
PCDHB17P-201ENST00000539533 PRDM11Q9NQV5 511 aa21.76■■□□□ 1.07
PCDHB17P-201ENST00000539533 AMOTQ4VCS5 1084 aa21.76■■□□□ 1.07
PCDHB17P-201ENST00000539533 MRPL50Q8N5N7 158 aaKnown RBP21.76■■□□□ 1.07
PCDHB17P-201ENST00000539533 LGR6Q9HBX8 967 aa21.76■■□□□ 1.07
PCDHB17P-201ENST00000539533 LMO7Q8WWI1 1683 aa21.76■■□□□ 1.07
PCDHB17P-201ENST00000539533 LRRC37A3O60309 1634 aa21.75■■□□□ 1.07
PCDHB17P-201ENST00000539533 KIF16BQ96L93 1317 aa21.75■■□□□ 1.07
PCDHB17P-201ENST00000539533 BRPF1P55201 1214 aaPredicted RBP21.75■■□□□ 1.07
PCDHB17P-201ENST00000539533 FTSJ3Q8IY81 847 aaKnown RBP21.75■■□□□ 1.07
PCDHB17P-201ENST00000539533 ROBO1Q9Y6N7 1651 aa21.74■■□□□ 1.07
PCDHB17P-201ENST00000539533 AKAP4Q5JQC9 854 aa21.74■■□□□ 1.07
PCDHB17P-201ENST00000539533 ABCC6O95255 1503 aa21.73■■□□□ 1.07
PCDHB17P-201ENST00000539533 IPO8O15397 1037 aaKnown RBP21.73■■□□□ 1.07
PCDHB17P-201ENST00000539533 TAF7Q15545 349 aaPredicted RBP21.73■■□□□ 1.07
PCDHB17P-201ENST00000539533 MPRIPQ6WCQ1 1025 aa21.73■■□□□ 1.07
PCDHB17P-201ENST00000539533 CEMIPQ8WUJ3 1361 aa21.72■■□□□ 1.07
PCDHB17P-201ENST00000539533 MVPQ14764 893 aaKnown RBP21.72■■□□□ 1.07
PCDHB17P-201ENST00000539533 RAPGEF4Q8WZA2 1011 aa21.72■■□□□ 1.07
PCDHB17P-201ENST00000539533 ABCA3Q99758 1704 aa21.71■■□□□ 1.07
PCDHB17P-201ENST00000539533 FAM208AQ9UK61 1670 aaKnown RBP21.71■■□□□ 1.07
PCDHB17P-201ENST00000539533 C1orf141Q5JVX7 400 aa21.7■■□□□ 1.07
PCDHB17P-201ENST00000539533 USP35Q9P2H5 1018 aa21.7■■□□□ 1.07
PCDHB17P-201ENST00000539533 SKAP1Q86WV1 359 aa21.7■■□□□ 1.06
PCDHB17P-201ENST00000539533 RTN4Q9NQC3 1192 aaKnown RBP21.69■■□□□ 1.06
PCDHB17P-201ENST00000539533 KDM2BQ8NHM5 1336 aa21.69■■□□□ 1.06
PCDHB17P-201ENST00000539533 TMEM57Q8N5G2 664 aa21.68■■□□□ 1.06
PCDHB17P-201ENST00000539533 MEGF6O75095 1541 aa21.68■■□□□ 1.06
PCDHB17P-201ENST00000539533 TATP17735 454 aaPredicted RBP21.68■■□□□ 1.06
PCDHB17P-201ENST00000539533 ITPRIPQ8IWB1 547 aa21.67■■□□□ 1.06
PCDHB17P-201ENST00000539533 RNMTO43148 476 aaKnown RBP21.67■■□□□ 1.06
PCDHB17P-201ENST00000539533 ARHGAP45Q92619 1136 aa21.67■■□□□ 1.06
PCDHB17P-201ENST00000539533 WDR17Q8IZU2 1322 aa21.67■■□□□ 1.06
PCDHB17P-201ENST00000539533 DDRGK1Q96HY6 314 aa21.66■■□□□ 1.06
PCDHB17P-201ENST00000539533 BABAM1Q9NWV8 329 aa21.66■■□□□ 1.06
PCDHB17P-201ENST00000539533 COL5A2P05997 1499 aaPredicted RBP21.65■■□□□ 1.06
PCDHB17P-201ENST00000539533 TEFQ10587 303 aa21.65■■□□□ 1.06
PCDHB17P-201ENST00000539533 TOM1L2Q6ZVM7 507 aa21.65■■□□□ 1.06
PCDHB17P-201ENST00000539533 AHDC1Q5TGY3 1603 aaPredicted RBP21.65■■□□□ 1.06
PCDHB17P-201ENST00000539533 CENPQQ7L2Z9 268 aaPredicted RBP21.65■■□□□ 1.06
PCDHB17P-201ENST00000539533 IGHDP01880 384 aa21.64■■□□□ 1.05
PCDHB17P-201ENST00000539533 PCDHB15Q9Y5E8 787 aa21.64■■□□□ 1.05
PCDHB17P-201ENST00000539533 STRN4Q9NRL3 753 aa21.63■■□□□ 1.05
PCDHB17P-201ENST00000539533 AAMPQ13685 434 aa21.63■■□□□ 1.05
PCDHB17P-201ENST00000539533 DDX19BQ9UMR2 479 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms