RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 SETD1AO15047 1707 aaKnown RBP7.06□□□□□ -1.28
RAB3GAP1-207ENST00000539493 SRPK2P78362 688 aaKnown RBP7.06□□□□□ -1.28
RAB3GAP1-207ENST00000539493 AEBP1Q8IUX7 1158 aa7.06□□□□□ -1.28
RAB3GAP1-207ENST00000539493 FAM53CQ9NYF3 392 aa7.06□□□□□ -1.28
RAB3GAP1-207ENST00000539493 DONSONQ9NYP3 566 aa7.06□□□□□ -1.28
RAB3GAP1-207ENST00000539493 A0A1W2PP64 1363 aa7.06□□□□□ -1.28
RAB3GAP1-207ENST00000539493 MINK1Q8N4C8 1332 aaPredicted RBP7.06□□□□□ -1.28
RAB3GAP1-207ENST00000539493 NASPP49321 788 aaPredicted RBP7.06□□□□□ -1.28
RAB3GAP1-207ENST00000539493 CLEC17AQ6ZS10 378 aa7.06□□□□□ -1.28
RAB3GAP1-207ENST00000539493 NSD2O96028 1365 aa7.06□□□□□ -1.28
RAB3GAP1-207ENST00000539493 ATAD2Q6PL18 1390 aa7.06□□□□□ -1.28
RAB3GAP1-207ENST00000539493 GUCY2CP25092 1073 aa7.06□□□□□ -1.28
RAB3GAP1-207ENST00000539493 MAP2K1Q02750 393 aaPredicted RBP7.06□□□□□ -1.28
RAB3GAP1-207ENST00000539493 TERF2Q15554 542 aa7.06□□□□□ -1.28
RAB3GAP1-207ENST00000539493 CCDC146Q8IYE0 955 aa7.06□□□□□ -1.28
RAB3GAP1-207ENST00000539493 PDCL2Q8N4E4 241 aa7.06□□□□□ -1.28
RAB3GAP1-207ENST00000539493 NRXN3Q9Y4C0 1643 aa7.05□□□□□ -1.28
RAB3GAP1-207ENST00000539493 DLC1Q96QB1 1528 aa7.05□□□□□ -1.28
RAB3GAP1-207ENST00000539493 ZNF445P59923 1031 aa7.05□□□□□ -1.28
RAB3GAP1-207ENST00000539493 TPRNQ4KMQ1 711 aa7.05□□□□□ -1.28
RAB3GAP1-207ENST00000539493 RBM28Q9NW13 759 aaKnown RBP7.05□□□□□ -1.28
RAB3GAP1-207ENST00000539493 MORC2Q9Y6X9 1032 aaPredicted RBP7.05□□□□□ -1.28
RAB3GAP1-207ENST00000539493 CD163L1Q9NR16 1453 aa7.05□□□□□ -1.28
RAB3GAP1-207ENST00000539493 ABCC11Q96J66 1382 aa7.05□□□□□ -1.28
RAB3GAP1-207ENST00000539493 CTIFO43310 598 aaKnown RBP7.05□□□□□ -1.28
RAB3GAP1-207ENST00000539493 XPCQ01831 940 aaPredicted RBP7.05□□□□□ -1.28
RAB3GAP1-207ENST00000539493 SHPRHQ149N8 1683 aa7.05□□□□□ -1.28
RAB3GAP1-207ENST00000539493 TNRQ92752 1358 aa7.05□□□□□ -1.28
RAB3GAP1-207ENST00000539493 CHMP4CQ96CF2 233 aa7.04□□□□□ -1.28
RAB3GAP1-207ENST00000539493 APAF1O14727 1248 aa7.04□□□□□ -1.28
RAB3GAP1-207ENST00000539493 MAFGO15525 162 aa7.04□□□□□ -1.28
RAB3GAP1-207ENST00000539493 IGSF3O75054 1194 aa7.04□□□□□ -1.28
RAB3GAP1-207ENST00000539493 DUSP27Q5VZP5 1158 aa7.04□□□□□ -1.28
RAB3GAP1-207ENST00000539493 ICE2Q659A1 982 aa7.04□□□□□ -1.28
RAB3GAP1-207ENST00000539493 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.04□□□□□ -1.28
RAB3GAP1-207ENST00000539493 MED4Q9NPJ6 270 aa7.04□□□□□ -1.28
RAB3GAP1-207ENST00000539493 GOLGA2Q08379 1002 aa7.04□□□□□ -1.28
RAB3GAP1-207ENST00000539493 ZKSCAN8Q15776 578 aaPredicted RBP7.04□□□□□ -1.28
RAB3GAP1-207ENST00000539493 CC2D2BQ6DHV5 1058 aa7.04□□□□□ -1.28
RAB3GAP1-207ENST00000539493 SLC26A8Q96RN1 970 aa7.04□□□□□ -1.28
RAB3GAP1-207ENST00000539493 CDK19Q9BWU1 502 aa7.04□□□□□ -1.28
RAB3GAP1-207ENST00000539493 TBC1D2Q9BYX2 928 aa7.04□□□□□ -1.28
RAB3GAP1-207ENST00000539493 CIZ1Q9ULV3 898 aaPredicted RBP7.04□□□□□ -1.28
RAB3GAP1-207ENST00000539493 METP08581 1390 aa7.03□□□□□ -1.28
RAB3GAP1-207ENST00000539493 DHX16O60231 1041 aaKnown RBP7.03□□□□□ -1.28
RAB3GAP1-207ENST00000539493 MTHFSP49914 203 aa7.03□□□□□ -1.28
RAB3GAP1-207ENST00000539493 TMEM132AQ24JP5 1023 aa7.03□□□□□ -1.28
RAB3GAP1-207ENST00000539493 WAPLQ7Z5K2 1190 aa7.03□□□□□ -1.28
RAB3GAP1-207ENST00000539493 GZF1Q9H116 711 aaPredicted RBP7.03□□□□□ -1.28
RAB3GAP1-207ENST00000539493 CCDC39Q9UFE4 941 aa7.03□□□□□ -1.28
RAB3GAP1-207ENST00000539493 TBC1D32Q96NH3 1257 aa7.03□□□□□ -1.28
RAB3GAP1-207ENST00000539493 DDX41Q9UJV9 622 aaKnown RBP7.03□□□□□ -1.28
RAB3GAP1-207ENST00000539493 SEMA3FQ13275 785 aa7.02□□□□□ -1.29
RAB3GAP1-207ENST00000539493 SWT1Q5T5J6 900 aaKnown RBP7.02□□□□□ -1.29
RAB3GAP1-207ENST00000539493 TERF2IPQ9NYB0 399 aa7.02□□□□□ -1.29
RAB3GAP1-207ENST00000539493 TMEM2Q9UHN6 1383 aa7.02□□□□□ -1.29
RAB3GAP1-207ENST00000539493 UBR1Q8IWV7 1749 aa7.02□□□□□ -1.29
RAB3GAP1-207ENST00000539493 GTF2A1P52655 376 aaPredicted RBP7.02□□□□□ -1.29
RAB3GAP1-207ENST00000539493 GSCP56915 257 aaPredicted RBP7.02□□□□□ -1.29
RAB3GAP1-207ENST00000539493 SLFN5Q08AF3 891 aa7.02□□□□□ -1.29
RAB3GAP1-207ENST00000539493 MUM1L1Q5H9M0 696 aa7.02□□□□□ -1.29
RAB3GAP1-207ENST00000539493 OTUD6BQ8N6M0 293 aa7.02□□□□□ -1.29
RAB3GAP1-207ENST00000539493 MNS1Q8NEH6 495 aa7.02□□□□□ -1.29
RAB3GAP1-207ENST00000539493 PSMD1Q99460 953 aa7.02□□□□□ -1.29
RAB3GAP1-207ENST00000539493 BCL2L12Q9HB09 334 aa7.02□□□□□ -1.29
RAB3GAP1-207ENST00000539493 SPTLC3Q9NUV7 552 aa7.02□□□□□ -1.29
RAB3GAP1-207ENST00000539493 CCDC189A1A4V9 331 aa7.02□□□□□ -1.29
RAB3GAP1-207ENST00000539493 TRHP20396 242 aaPredicted RBP7.02□□□□□ -1.29
RAB3GAP1-207ENST00000539493 TRMT2AQ8IZ69 625 aaKnown RBP7.02□□□□□ -1.29
RAB3GAP1-207ENST00000539493 SLKQ9H2G2 1235 aaPredicted RBP7.02□□□□□ -1.29
RAB3GAP1-207ENST00000539493 CABP1Q9NZU7 370 aa7.02□□□□□ -1.29
RAB3GAP1-207ENST00000539493 MED14O60244 1454 aa7.02□□□□□ -1.29
RAB3GAP1-207ENST00000539493 FYB1O15117 783 aa7.01□□□□□ -1.29
RAB3GAP1-207ENST00000539493 PLIN1O60240 522 aa7.01□□□□□ -1.29
RAB3GAP1-207ENST00000539493 HDGFP51858 240 aaKnown RBP7.01□□□□□ -1.29
RAB3GAP1-207ENST00000539493 C11orf91Q3C1V1 193 aa7.01□□□□□ -1.29
RAB3GAP1-207ENST00000539493 GGNBP2Q9H3C7 697 aa7.01□□□□□ -1.29
RAB3GAP1-207ENST00000539493 TECPR2O15040 1411 aa7.01□□□□□ -1.29
RAB3GAP1-207ENST00000539493 IQSEC2Q5JU85 1478 aa7.01□□□□□ -1.29
RAB3GAP1-207ENST00000539493 RPAINQ86UA6 219 aa7.01□□□□□ -1.29
RAB3GAP1-207ENST00000539493 CFAP53Q96M91 514 aa7.01□□□□□ -1.29
RAB3GAP1-207ENST00000539493 CTNNA3Q9UI47 895 aa7.01□□□□□ -1.29
RAB3GAP1-207ENST00000539493 REC8O95072 547 aa7□□□□□ -1.29
RAB3GAP1-207ENST00000539493 HDGFL2Q7Z4V5 671 aaPredicted RBP7□□□□□ -1.29
RAB3GAP1-207ENST00000539493 RNF217Q8TC41 542 aa7□□□□□ -1.29
RAB3GAP1-207ENST00000539493 KNDC1Q76NI1 1749 aa7□□□□□ -1.29
RAB3GAP1-207ENST00000539493 ANKRD26Q9UPS8 1709 aa7□□□□□ -1.29
RAB3GAP1-207ENST00000539493 ATP7BP35670 1465 aa7□□□□□ -1.29
RAB3GAP1-207ENST00000539493 KIF3CO14782 793 aa7□□□□□ -1.29
RAB3GAP1-207ENST00000539493 NBPF6Q5VWK0 638 aa7□□□□□ -1.29
RAB3GAP1-207ENST00000539493 NBPF5PQ86XG9 351 aaPredicted RBP7□□□□□ -1.29
RAB3GAP1-207ENST00000539493 RUNDC1Q96C34 613 aa7□□□□□ -1.29
RAB3GAP1-207ENST00000539493 NBPF4Q96M43 638 aa7□□□□□ -1.29
RAB3GAP1-207ENST00000539493 DMRT2Q9Y5R5 561 aa7□□□□□ -1.29
RAB3GAP1-207ENST00000539493 FAM135BQ49AJ0 1406 aa7□□□□□ -1.29
RAB3GAP1-207ENST00000539493 CPS1P31327 1500 aa7□□□□□ -1.29
RAB3GAP1-207ENST00000539493 ADAMTS13Q76LX8 1427 aa7□□□□□ -1.29
RAB3GAP1-207ENST00000539493 GOLIM4O00461 696 aa7□□□□□ -1.29
RAB3GAP1-207ENST00000539493 CEBPAP49715 358 aaPredicted RBP7□□□□□ -1.29
RAB3GAP1-207ENST00000539493 TXNDC2Q86VQ3 553 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms