RNA–Protein interactions for RNA: ENST00000539479.5

MDM2-225, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-225ENST00000539479 HNRNPUQ00839 825 aaKnown RBP eCLIP8.45□□□□□ -1.06
MDM2-225ENST00000539479 MICALL2Q8IY33 904 aa8.45□□□□□ -1.06
MDM2-225ENST00000539479 KIF1AQ12756 1690 aa8.45□□□□□ -1.06
MDM2-225ENST00000539479 MAP2P11137 1827 aaKnown RBP8.45□□□□□ -1.06
MDM2-225ENST00000539479 XPCQ01831 940 aaPredicted RBP8.44□□□□□ -1.06
MDM2-225ENST00000539479 RRS1Q15050 365 aaKnown RBP8.44□□□□□ -1.06
MDM2-225ENST00000539479 TTC21AQ8NDW8 1320 aa8.44□□□□□ -1.06
MDM2-225ENST00000539479 CDK12Q9NYV4 1490 aaPredicted RBP8.44□□□□□ -1.06
MDM2-225ENST00000539479 SLIT3O75094 1523 aa8.44□□□□□ -1.06
MDM2-225ENST00000539479 MED1Q15648 1581 aaPredicted RBP8.44□□□□□ -1.06
MDM2-225ENST00000539479 CRYBG1Q9Y4K1 1723 aa8.43□□□□□ -1.06
MDM2-225ENST00000539479 ESCO1Q5FWF5 840 aa8.43□□□□□ -1.06
MDM2-225ENST00000539479 ANKRD13DQ6ZTN6 518 aa8.43□□□□□ -1.06
MDM2-225ENST00000539479 NGDNQ8NEJ9 315 aaKnown RBP8.43□□□□□ -1.06
MDM2-225ENST00000539479 ZBED9Q6R2W3 1325 aa8.43□□□□□ -1.06
MDM2-225ENST00000539479 RGPD1P0DJD0 1748 aa8.43□□□□□ -1.06
MDM2-225ENST00000539479 FOXO3O43524 673 aa8.42□□□□□ -1.06
MDM2-225ENST00000539479 NUTM2GQ5VZR2 741 aa8.42□□□□□ -1.06
MDM2-225ENST00000539479 BRINP3Q76B58 766 aa8.42□□□□□ -1.06
MDM2-225ENST00000539479 ZNF521Q96K83 1311 aa8.42□□□□□ -1.06
MDM2-225ENST00000539479 MSH6P52701 1360 aa8.41□□□□□ -1.06
MDM2-225ENST00000539479 USP19O94966 1318 aa8.41□□□□□ -1.06
MDM2-225ENST00000539479 MAP3K19Q56UN5 1328 aa8.41□□□□□ -1.06
MDM2-225ENST00000539479 IL13P35225 146 aa8.41□□□□□ -1.06
MDM2-225ENST00000539479 C14orf37Q86TY3 774 aa8.41□□□□□ -1.06
MDM2-225ENST00000539479 CCDC146Q8IYE0 955 aa8.41□□□□□ -1.06
MDM2-225ENST00000539479 GPR153Q6NV75 609 aa8.4□□□□□ -1.06
MDM2-225ENST00000539479 COG3Q96JB2 828 aa8.4□□□□□ -1.06
MDM2-225ENST00000539479 PLEKHF1Q96S99 279 aa8.4□□□□□ -1.06
MDM2-225ENST00000539479 NHSL1Q5SYE7 1610 aa8.4□□□□□ -1.07
MDM2-225ENST00000539479 PHRF1Q9P1Y6 1649 aaKnown RBP8.4□□□□□ -1.07
MDM2-225ENST00000539479 ATF3P18847 181 aa8.39□□□□□ -1.07
MDM2-225ENST00000539479 KRT28Q7Z3Y7 464 aa8.39□□□□□ -1.07
MDM2-225ENST00000539479 CADPS2Q86UW7 1296 aa8.39□□□□□ -1.07
MDM2-225ENST00000539479 SBNO1A3KN83 1393 aa8.38□□□□□ -1.07
MDM2-225ENST00000539479 SOX12O15370 315 aa8.38□□□□□ -1.07
MDM2-225ENST00000539479 NLRP6P59044 892 aa8.38□□□□□ -1.07
MDM2-225ENST00000539479 EIF4A2Q14240 407 aaKnown RBP8.38□□□□□ -1.07
MDM2-225ENST00000539479 HSP90AB2PQ58FF8 381 aa8.38□□□□□ -1.07
MDM2-225ENST00000539479 TMEM92Q6UXU6 159 aa8.38□□□□□ -1.07
MDM2-225ENST00000539479 IFNLR1Q8IU57 520 aaPredicted RBP8.38□□□□□ -1.07
MDM2-225ENST00000539479 CDCA7LQ96GN5 454 aa8.38□□□□□ -1.07
MDM2-225ENST00000539479 SLAIN2Q9P270 581 aa8.38□□□□□ -1.07
MDM2-225ENST00000539479 COL18A1P39060 1754 aa8.38□□□□□ -1.07
MDM2-225ENST00000539479 TNS3Q68CZ2 1445 aa8.37□□□□□ -1.07
MDM2-225ENST00000539479 SOS2Q07890 1332 aaPredicted RBP8.37□□□□□ -1.07
MDM2-225ENST00000539479 APAF1O14727 1248 aa8.37□□□□□ -1.07
MDM2-225ENST00000539479 CENPBP07199 599 aaPredicted RBP8.37□□□□□ -1.07
MDM2-225ENST00000539479 ABTB2Q8N961 1025 aa8.37□□□□□ -1.07
MDM2-225ENST00000539479 RSPH6AQ9H0K4 717 aa8.37□□□□□ -1.07
MDM2-225ENST00000539479 LTN1O94822 1766 aa8.37□□□□□ -1.07
MDM2-225ENST00000539479 ABCA3Q99758 1704 aa8.37□□□□□ -1.07
MDM2-225ENST00000539479 SPATA31A3Q5VYP0 1347 aa8.36□□□□□ -1.07
MDM2-225ENST00000539479 PSME1Q06323 249 aa8.36□□□□□ -1.07
MDM2-225ENST00000539479 WDR43Q15061 677 aaKnown RBP eCLIP8.36□□□□□ -1.07
MDM2-225ENST00000539479 ARSIQ5FYB1 569 aa8.36□□□□□ -1.07
MDM2-225ENST00000539479 AEBP1Q8IUX7 1158 aa8.36□□□□□ -1.07
MDM2-225ENST00000539479 SALL2Q9Y467 1007 aaPredicted RBP8.36□□□□□ -1.07
MDM2-225ENST00000539479 LMO7Q8WWI1 1683 aa8.35□□□□□ -1.07
MDM2-225ENST00000539479 ROBO1Q9Y6N7 1651 aa8.35□□□□□ -1.07
MDM2-225ENST00000539479 PPM1GO15355 546 aaPredicted RBP8.35□□□□□ -1.07
MDM2-225ENST00000539479 DIAPH1O60610 1272 aaKnown RBP8.35□□□□□ -1.07
MDM2-225ENST00000539479 HOXC9P31274 260 aa8.35□□□□□ -1.07
MDM2-225ENST00000539479 LSM11P83369 360 aaKnown RBP eCLIP8.35□□□□□ -1.07
MDM2-225ENST00000539479 ARHGEF25Q86VW2 580 aa8.35□□□□□ -1.07
MDM2-225ENST00000539479 PHACTR3Q96KR7 559 aa8.35□□□□□ -1.07
MDM2-225ENST00000539479 AHDC1Q5TGY3 1603 aaPredicted RBP8.35□□□□□ -1.07
MDM2-225ENST00000539479 NCAPD2Q15021 1401 aa8.35□□□□□ -1.07
MDM2-225ENST00000539479 RGPD2P0DJD1 1756 aa8.35□□□□□ -1.07
MDM2-225ENST00000539479 FLT4P35916 1363 aa8.35□□□□□ -1.07
MDM2-225ENST00000539479 NPHP3Q7Z494 1330 aa8.34□□□□□ -1.07
MDM2-225ENST00000539479 CAMTA1Q9Y6Y1 1673 aa8.34□□□□□ -1.07
MDM2-225ENST00000539479 GCP02774 474 aa8.34□□□□□ -1.07
MDM2-225ENST00000539479 U2AF1L5P0DN76 240 aaPredicted RBP8.34□□□□□ -1.07
MDM2-225ENST00000539479 U2AF1Q01081 240 aaKnown RBP eCLIP8.34□□□□□ -1.074e-9■□□□□ 9.1
MDM2-225ENST00000539479 TRMT2AQ8IZ69 625 aaKnown RBP8.34□□□□□ -1.07
MDM2-225ENST00000539479 TCP11L2Q8N4U5 519 aa8.34□□□□□ -1.07
MDM2-225ENST00000539479 CABLES1Q8TDN4 633 aa8.34□□□□□ -1.07
MDM2-225ENST00000539479 RUNDC1Q96C34 613 aa8.34□□□□□ -1.07
MDM2-225ENST00000539479 CFAP53Q96M91 514 aa8.34□□□□□ -1.07
MDM2-225ENST00000539479 AXIN2Q9Y2T1 843 aa8.34□□□□□ -1.07
MDM2-225ENST00000539479 RRP7AQ9Y3A4 280 aaKnown RBP8.34□□□□□ -1.07
MDM2-225ENST00000539479 RTL1A6NKG5 1358 aa8.34□□□□□ -1.07
MDM2-225ENST00000539479 IGSF1Q8N6C5 1336 aa8.33□□□□□ -1.08
MDM2-225ENST00000539479 RGPD5Q99666 1765 aa8.33□□□□□ -1.08
MDM2-225ENST00000539479 U2SURPO15042 1029 aaKnown RBP8.33□□□□□ -1.08
MDM2-225ENST00000539479 HMOX1P09601 288 aa8.33□□□□□ -1.08
MDM2-225ENST00000539479 KDRP35968 1356 aa8.33□□□□□ -1.08
MDM2-225ENST00000539479 KIF24Q5T7B8 1368 aa8.33□□□□□ -1.08
MDM2-225ENST00000539479 COL16A1Q07092 1604 aaPredicted RBP8.32□□□□□ -1.08
MDM2-225ENST00000539479 PRKAR2BP31323 418 aa8.32□□□□□ -1.08
MDM2-225ENST00000539479 PBX2P40425 430 aa8.32□□□□□ -1.08
MDM2-225ENST00000539479 TMPOP42166 694 aaKnown RBP8.32□□□□□ -1.08
MDM2-225ENST00000539479 DUSP27Q5VZP5 1158 aa8.32□□□□□ -1.08
MDM2-225ENST00000539479 WWC1Q8IX03 1113 aa8.32□□□□□ -1.08
MDM2-225ENST00000539479 IP6K1Q92551 441 aa8.32□□□□□ -1.08
MDM2-225ENST00000539479 EYA1Q99502 592 aa8.32□□□□□ -1.08
MDM2-225ENST00000539479 NUDCQ9Y266 331 aa8.32□□□□□ -1.08
MDM2-225ENST00000539479 FAM208AQ9UK61 1670 aaKnown RBP8.32□□□□□ -1.08
MDM2-225ENST00000539479 ARHGEF10O15013 1369 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms